RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 TMEM101Q96IK0 257 aa11.07□□□□□ -0.64
SDCBP-201ENST00000260130 TRAV8-4A0A0B4J246 113 aa11.07□□□□□ -0.64
SDCBP-201ENST00000260130 Q8N814 137 aa11.07□□□□□ -0.64
SDCBP-201ENST00000260130 LECT2O14960 151 aa11.06□□□□□ -0.64
SDCBP-201ENST00000260130 FUSP35637 526 aaKnown RBP eCLIP11.06□□□□□ -0.64
SDCBP-201ENST00000260130 LRP1BQ9NZR2 4599 aa11.06□□□□□ -0.64
SDCBP-201ENST00000260130 IGLV10-54A0A075B6I4 117 aa11.06□□□□□ -0.64
SDCBP-201ENST00000260130 NPC2P61916 151 aa11.06□□□□□ -0.64
SDCBP-201ENST00000260130 H3BT86 120 aa11.04□□□□□ -0.64
SDCBP-201ENST00000260130 KRTAP26-1Q6PEX3 210 aa11.04□□□□□ -0.64
SDCBP-201ENST00000260130 C2orf82Q6UX34 121 aa11.04□□□□□ -0.64
SDCBP-201ENST00000260130 FAM19A3Q7Z5A8 133 aa11.04□□□□□ -0.64
SDCBP-201ENST00000260130 COPS9Q8WXC6 57 aa11.04□□□□□ -0.64
SDCBP-201ENST00000260130 IGKV3OR2-268A0A0C4DH90 116 aa11.04□□□□□ -0.64
SDCBP-201ENST00000260130 CSDC2Q9Y534 153 aaKnown RBP11.04□□□□□ -0.64
SDCBP-201ENST00000260130 IGLV5-39A0A0G2JS06 123 aa11.03□□□□□ -0.64
SDCBP-201ENST00000260130 CDC42SE2Q9NRR3 84 aa11.03□□□□□ -0.64
SDCBP-201ENST00000260130 LST1O00453 97 aa11.02□□□□□ -0.65
SDCBP-201ENST00000260130 COX6A2Q02221 97 aa11.02□□□□□ -0.65
SDCBP-201ENST00000260130 LINC00242Q5T6M2 205 aa11.02□□□□□ -0.65
SDCBP-201ENST00000260130 TEX49A0A1B0GTD5 131 aa11.01□□□□□ -0.65
SDCBP-201ENST00000260130 IGLV5-52A0A0A0MRZ9 124 aa11.01□□□□□ -0.65
SDCBP-201ENST00000260130 SNCGO76070 127 aa11□□□□□ -0.65
SDCBP-201ENST00000260130 DAND5Q8N907 189 aa11□□□□□ -0.65
SDCBP-201ENST00000260130 KIAA1109Q2LD37 5005 aa11□□□□□ -0.65
SDCBP-201ENST00000260130 LINC00308Q8TCZ7 52 aa11□□□□□ -0.65
SDCBP-201ENST00000260130 CLEC2BQ92478 149 aa11□□□□□ -0.65
SDCBP-201ENST00000260130 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.99□□□□□ -0.65
SDCBP-201ENST00000260130 USP17L23D6RBM5 183 aa10.99□□□□□ -0.65
SDCBP-201ENST00000260130 C14orf177Q52M58 125 aa10.99□□□□□ -0.65
SDCBP-201ENST00000260130 SMIM1B2RUZ4 78 aa10.99□□□□□ -0.65
SDCBP-201ENST00000260130 CHCHD10Q8WYQ3 142 aaPredicted RBP10.99□□□□□ -0.65
SDCBP-201ENST00000260130 LINC00959A0A1B0GUT2 108 aa10.98□□□□□ -0.65
SDCBP-201ENST00000260130 TRAV13-1A0A0B4J241 112 aa10.97□□□□□ -0.65
SDCBP-201ENST00000260130 HERV-K104P63124 156 aa10.97□□□□□ -0.65
SDCBP-201ENST00000260130 GAGE2BQ13066 116 aa10.96□□□□□ -0.65
SDCBP-201ENST00000260130 SS18Q15532 418 aa10.96□□□□□ -0.65
SDCBP-201ENST00000260130 GAGE2EQ4V326 116 aa10.96□□□□□ -0.65
SDCBP-201ENST00000260130 ANAPC13Q9BS18 74 aa10.96□□□□□ -0.65
SDCBP-201ENST00000260130 GAGE2DQ9UEU5 116 aa10.96□□□□□ -0.65
SDCBP-201ENST00000260130 KRTAP10-1P60331 282 aa10.95□□□□□ -0.66
SDCBP-201ENST00000260130 MEIG1Q5JSS6 88 aa10.95□□□□□ -0.66
SDCBP-201ENST00000260130 ZNF625Q96I27 306 aaPredicted RBP10.95□□□□□ -0.66
SDCBP-201ENST00000260130 PPDPFQ9H3Y8 114 aa10.95□□□□□ -0.66
SDCBP-201ENST00000260130 APOBP04114 4563 aaKnown RBP10.95□□□□□ -0.66
SDCBP-201ENST00000260130 XCL1P47992 114 aa10.94□□□□□ -0.66
SDCBP-201ENST00000260130 Q6Q795 121 aa10.94□□□□□ -0.66
SDCBP-201ENST00000260130 FAM240AA0A1B0GVK7 77 aa10.94□□□□□ -0.66
SDCBP-201ENST00000260130 CDK2AP2O75956 126 aa10.94□□□□□ -0.66
SDCBP-201ENST00000260130 HERC2O95714 4834 aa10.94□□□□□ -0.66
SDCBP-201ENST00000260130 RYR1P21817 5038 aa10.93□□□□□ -0.66
SDCBP-201ENST00000260130 COX7A2LO14548 114 aa10.93□□□□□ -0.66
SDCBP-201ENST00000260130 A0A0U1RRA0 63 aa10.92□□□□□ -0.66
SDCBP-201ENST00000260130 CFAP161Q6P656 301 aa10.92□□□□□ -0.66
SDCBP-201ENST00000260130 CD164L2Q6UWJ8 174 aa10.92□□□□□ -0.66
SDCBP-201ENST00000260130 SOSTDC1Q6X4U4 206 aa10.91□□□□□ -0.66
SDCBP-201ENST00000260130 HSPG2P98160 4391 aa10.9□□□□□ -0.66
SDCBP-201ENST00000260130 C15orf56Q8N910 161 aa10.9□□□□□ -0.66
SDCBP-201ENST00000260130 TRACP01848 142 aa10.88□□□□□ -0.67
SDCBP-201ENST00000260130 NDUFV3P56181 108 aaKnown RBP10.88□□□□□ -0.67
SDCBP-201ENST00000260130 DNAH8Q96JB1 4490 aa10.87□□□□□ -0.67
SDCBP-201ENST00000260130 TRAV13-2A0A0B4J235 113 aa10.86□□□□□ -0.67
SDCBP-201ENST00000260130 ACYP1P07311 99 aa10.86□□□□□ -0.67
SDCBP-201ENST00000260130 COX7B2Q8TF08 81 aa10.86□□□□□ -0.67
SDCBP-201ENST00000260130 CNBPP62633 177 aaKnown RBP10.86□□□□□ -0.67
SDCBP-201ENST00000260130 HIGD2BQ4VC39 106 aa10.86□□□□□ -0.67
SDCBP-201ENST00000260130 C9orf163Q8N9P6 203 aa10.85□□□□□ -0.67
SDCBP-201ENST00000260130 GVQW2A0A096LPI5 108 aaPredicted RBP10.84□□□□□ -0.67
SDCBP-201ENST00000260130 SLPIP03973 132 aa10.84□□□□□ -0.67
SDCBP-201ENST00000260130 MALP21145 153 aa10.84□□□□□ -0.67
SDCBP-201ENST00000260130 FAM30AQ9NZY2 134 aa10.84□□□□□ -0.67
SDCBP-201ENST00000260130 C5orf38Q86SI9 138 aa10.83□□□□□ -0.68
SDCBP-201ENST00000260130 IGHV3OR16-9A0A0B4J2B5 98 aa10.82□□□□□ -0.68
SDCBP-201ENST00000260130 Q6ZSA8 131 aa10.82□□□□□ -0.68
SDCBP-201ENST00000260130 RPL28P46779 137 aaKnown RBP10.82□□□□□ -0.68
SDCBP-201ENST00000260130 BAALC-AS2P0C853 105 aa10.81□□□□□ -0.68
SDCBP-201ENST00000260130 MIR7-3HGQ8N6C7 128 aa10.81□□□□□ -0.68
SDCBP-201ENST00000260130 TOMM7Q9P0U1 55 aa10.81□□□□□ -0.68
SDCBP-201ENST00000260130 ZNF561-AS1K7EIQ3 104 aa10.8□□□□□ -0.68
SDCBP-201ENST00000260130 SND1-IT1Q9HBX3 110 aa10.8□□□□□ -0.68
SDCBP-201ENST00000260130 TRBV7-7A0A0K0K1E9 115 aa10.79□□□□□ -0.68
SDCBP-201ENST00000260130 LINC00526Q96FQ7 95 aa10.79□□□□□ -0.68
SDCBP-201ENST00000260130 LINC00158P58513 81 aa10.79□□□□□ -0.68
SDCBP-201ENST00000260130 HAMPP81172 84 aa10.79□□□□□ -0.68
SDCBP-201ENST00000260130 SDIM1Q6ZPB5 146 aa10.79□□□□□ -0.68
SDCBP-201ENST00000260130 A0A087WZ39 114 aa10.78□□□□□ -0.68
SDCBP-201ENST00000260130 INAFM2P0DMQ5 153 aa10.77□□□□□ -0.68
SDCBP-201ENST00000260130 FAM218AQ96MZ4 157 aa10.77□□□□□ -0.68
SDCBP-201ENST00000260130 LINC00337Q8N6G1 96 aa10.77□□□□□ -0.69
SDCBP-201ENST00000260130 KRTAP17-1Q9BYP8 105 aa10.77□□□□□ -0.69
SDCBP-201ENST00000260130 IMUPQ9GZP8 106 aa10.77□□□□□ -0.69
SDCBP-201ENST00000260130 IGKV2-28A0A075B6P5 120 aa10.76□□□□□ -0.69
SDCBP-201ENST00000260130 IGKV2D-28P01615 120 aa10.76□□□□□ -0.69
SDCBP-201ENST00000260130 Q8N1X5 172 aa10.76□□□□□ -0.69
SDCBP-201ENST00000260130 B5MCH6 92 aa10.75□□□□□ -0.69
SDCBP-201ENST00000260130 H0YGX0 51 aa10.75□□□□□ -0.69
SDCBP-201ENST00000260130 SYCNQ0VAF6 134 aa10.75□□□□□ -0.69
SDCBP-201ENST00000260130 LINC00643Q86TS7 51 aa10.75□□□□□ -0.69
SDCBP-201ENST00000260130 DNAL4O96015 105 aa10.74□□□□□ -0.69
SDCBP-201ENST00000260130 SPAG11BQ08648 103 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms