RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 CYSRT1A8MQ03 144 aa11.56□□□□□ -0.56
SLC52A1-201ENST00000254853 USP17L23D6RBM5 183 aa11.56□□□□□ -0.56
SLC52A1-201ENST00000254853 LELP1Q5T871 98 aa11.55□□□□□ -0.56
SLC52A1-201ENST00000254853 KLK12Q9UKR0 248 aa11.55□□□□□ -0.56
SLC52A1-201ENST00000254853 WFDC9Q8NEX5 89 aa11.54□□□□□ -0.56
SLC52A1-201ENST00000254853 CYSTM1Q9H1C7 97 aa11.54□□□□□ -0.56
SLC52A1-201ENST00000254853 A0A0J9YWU9 116 aa11.54□□□□□ -0.56
SLC52A1-201ENST00000254853 IGHV4-30-4P0DP06 118 aa11.54□□□□□ -0.56
SLC52A1-201ENST00000254853 SERP2Q8N6R1 65 aa11.54□□□□□ -0.56
SLC52A1-201ENST00000254853 MIFP14174 115 aa11.53□□□□□ -0.56
SLC52A1-201ENST00000254853 SPART-AS1P0CW21 52 aa11.52□□□□□ -0.57
SLC52A1-201ENST00000254853 PRR34Q9NV39 138 aa11.52□□□□□ -0.57
SLC52A1-201ENST00000254853 IGLV6-57P01721 117 aa11.52□□□□□ -0.57
SLC52A1-201ENST00000254853 ENHOQ6UWT2 76 aa11.52□□□□□ -0.57
SLC52A1-201ENST00000254853 MUC7Q8TAX7 377 aa11.51□□□□□ -0.57
SLC52A1-201ENST00000254853 UNC79Q9P2D8 2635 aa11.51□□□□□ -0.57
SLC52A1-201ENST00000254853 ATP5EP2Q5VTU8 51 aa11.5□□□□□ -0.57
SLC52A1-201ENST00000254853 LYPD5Q6UWN5 251 aa11.5□□□□□ -0.57
SLC52A1-201ENST00000254853 FAM19A1Q7Z5A9 133 aa11.5□□□□□ -0.57
SLC52A1-201ENST00000254853 ZNF561-AS1K7EIQ3 104 aa11.49□□□□□ -0.57
SLC52A1-201ENST00000254853 RBM3P98179 157 aaKnown RBP11.49□□□□□ -0.57
SLC52A1-201ENST00000254853 Q6ZQT0 140 aa11.49□□□□□ -0.57
SLC52A1-201ENST00000254853 UPK3BQ9BT76 320 aa11.49□□□□□ -0.57
SLC52A1-201ENST00000254853 UBL5Q9BZL1 73 aa11.49□□□□□ -0.57
SLC52A1-201ENST00000254853 C6orf48Q9UBA6 75 aa11.48□□□□□ -0.57
SLC52A1-201ENST00000254853 LAMTOR3Q9UHA4 124 aa11.48□□□□□ -0.57
SLC52A1-201ENST00000254853 TRBV10-3A0A0K0K1G6 114 aa11.47□□□□□ -0.57
SLC52A1-201ENST00000254853 XAGE1AQ9HD64 81 aa11.47□□□□□ -0.57
SLC52A1-201ENST00000254853 GVQW2A0A096LPI5 108 aaPredicted RBP11.47□□□□□ -0.57
SLC52A1-201ENST00000254853 TRAV23DV6A0A075B6W5 121 aa11.46□□□□□ -0.57
SLC52A1-201ENST00000254853 LOC110117498A0A087WWA1 95 aa11.46□□□□□ -0.57
SLC52A1-201ENST00000254853 M0R2N4 97 aa11.46□□□□□ -0.57
SLC52A1-201ENST00000254853 Q6ZQY7 126 aa11.46□□□□□ -0.57
SLC52A1-201ENST00000254853 LOC107984640A0A0U1RRK4 108 aa11.46□□□□□ -0.58
SLC52A1-201ENST00000254853 INAFM1C9JVW0 142 aa11.46□□□□□ -0.58
SLC52A1-201ENST00000254853 GHRHP01286 108 aa11.44□□□□□ -0.58
SLC52A1-201ENST00000254853 DIRC1Q969H9 104 aa11.42□□□□□ -0.58
SLC52A1-201ENST00000254853 TENM1Q9UKZ4 2725 aa11.41□□□□□ -0.58
SLC52A1-201ENST00000254853 HIGD2BQ4VC39 106 aa11.41□□□□□ -0.58
SLC52A1-201ENST00000254853 DSCR8Q96T75 97 aa11.41□□□□□ -0.58
SLC52A1-201ENST00000254853 J3KT08 172 aa11.4□□□□□ -0.58
SLC52A1-201ENST00000254853 WFDC10BQ8IUB3 73 aa11.4□□□□□ -0.58
SLC52A1-201ENST00000254853 MAST4O15021 2626 aa11.39□□□□□ -0.59
SLC52A1-201ENST00000254853 ZNF73O43830 326 aaPredicted RBP11.39□□□□□ -0.59
SLC52A1-201ENST00000254853 TMEM258P61165 79 aa11.39□□□□□ -0.59
SLC52A1-201ENST00000254853 COX7BP24311 80 aa11.38□□□□□ -0.59
SLC52A1-201ENST00000254853 Q6ZVQ6 151 aa11.38□□□□□ -0.59
SLC52A1-201ENST00000254853 NOTCH2Q04721 2471 aa11.38□□□□□ -0.59
SLC52A1-201ENST00000254853 LINC01547P58512 204 aaPredicted RBP11.38□□□□□ -0.59
SLC52A1-201ENST00000254853 CAMK2N2Q96S95 79 aa11.38□□□□□ -0.59
SLC52A1-201ENST00000254853 VPREB1P12018 145 aa11.36□□□□□ -0.59
SLC52A1-201ENST00000254853 HAMPP81172 84 aa11.36□□□□□ -0.59
SLC52A1-201ENST00000254853 H3BQ85 93 aa11.36□□□□□ -0.59
SLC52A1-201ENST00000254853 KRTAP26-1Q6PEX3 210 aa11.36□□□□□ -0.59
SLC52A1-201ENST00000254853 ELOF1P60002 83 aaKnown RBP11.35□□□□□ -0.59
SLC52A1-201ENST00000254853 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.35□□□□□ -0.59
SLC52A1-201ENST00000254853 PDE6GP18545 87 aa11.35□□□□□ -0.59
SLC52A1-201ENST00000254853 RPS28P62857 69 aaKnown RBP11.35□□□□□ -0.59
SLC52A1-201ENST00000254853 KPRPQ5T749 579 aaPredicted RBP11.35□□□□□ -0.59
SLC52A1-201ENST00000254853 HIVEP1P15822 2718 aa11.35□□□□□ -0.59
SLC52A1-201ENST00000254853 Q6ZRU5 148 aa11.34□□□□□ -0.59
SLC52A1-201ENST00000254853 RETNQ9HD89 108 aa11.34□□□□□ -0.59
SLC52A1-201ENST00000254853 DPH3Q96FX2 82 aa11.34□□□□□ -0.59
SLC52A1-201ENST00000254853 TRRAPQ9Y4A5 3859 aa11.33□□□□□ -0.6
SLC52A1-201ENST00000254853 EGFEM1PQ0D2K5 195 aa11.33□□□□□ -0.6
SLC52A1-201ENST00000254853 TRBV7-4A0A0J9YYF1 115 aa11.32□□□□□ -0.6
SLC52A1-201ENST00000254853 FAM19A5Q7Z5A7 132 aaPredicted RBP11.32□□□□□ -0.6
SLC52A1-201ENST00000254853 C15orf56Q8N910 161 aa11.32□□□□□ -0.6
SLC52A1-201ENST00000254853 OTOGQ6ZRI0 2925 aa11.31□□□□□ -0.6
SLC52A1-201ENST00000254853 TRBV7-6A0A0J9YX20 115 aa11.31□□□□□ -0.6
SLC52A1-201ENST00000254853 M0R378 163 aa11.31□□□□□ -0.6
SLC52A1-201ENST00000254853 WIPF1O43516 503 aa11.31□□□□□ -0.6
SLC52A1-201ENST00000254853 NSD1Q96L73 2696 aaPredicted RBP11.3□□□□□ -0.6
SLC52A1-201ENST00000254853 ATRQ13535 2644 aa11.3□□□□□ -0.6
SLC52A1-201ENST00000254853 C20orf197Q8N268 126 aa11.3□□□□□ -0.6
SLC52A1-201ENST00000254853 Q6ZTC4 211 aa11.3□□□□□ -0.6
SLC52A1-201ENST00000254853 NDUFC2-KCTD14E9PQ53 114 aa11.29□□□□□ -0.6
SLC52A1-201ENST00000254853 TRAV10A0A0B4J240 114 aa11.28□□□□□ -0.6
SLC52A1-201ENST00000254853 H3BNG1 76 aa11.28□□□□□ -0.6
SLC52A1-201ENST00000254853 CXCL6P80162 114 aa11.28□□□□□ -0.6
SLC52A1-201ENST00000254853 ESRGQ1W209 222 aa11.27□□□□□ -0.6
SLC52A1-201ENST00000254853 LINC00528Q8N1L1 170 aa11.27□□□□□ -0.6
SLC52A1-201ENST00000254853 OXTP01178 125 aa11.27□□□□□ -0.61
SLC52A1-201ENST00000254853 SCXQ7RTU7 201 aa11.27□□□□□ -0.61
SLC52A1-201ENST00000254853 TEP1Q99973 2627 aaKnown RBP11.27□□□□□ -0.61
SLC52A1-201ENST00000254853 TRAV7A0A075B6U4 112 aa11.26□□□□□ -0.61
SLC52A1-201ENST00000254853 BCE1O60756 84 aa11.26□□□□□ -0.61
SLC52A1-201ENST00000254853 Q6ZRP5 223 aa11.26□□□□□ -0.61
SLC52A1-201ENST00000254853 OXLD1Q5BKU9 147 aa11.25□□□□□ -0.61
SLC52A1-201ENST00000254853 C1orf43Q9BWL3 253 aa11.24□□□□□ -0.61
SLC52A1-201ENST00000254853 KRTAP10-11P60412 298 aa11.24□□□□□ -0.61
SLC52A1-201ENST00000254853 IGKV2D-24A0A075B6R9 120 aa11.22□□□□□ -0.61
SLC52A1-201ENST00000254853 SYCNQ0VAF6 134 aa11.2□□□□□ -0.62
SLC52A1-201ENST00000254853 LINC01556Q5JQF7 62 aa11.19□□□□□ -0.62
SLC52A1-201ENST00000254853 H7BZZ5 65 aa11.17□□□□□ -0.62
SLC52A1-201ENST00000254853 SERTAD4-AS1Q5TG53 156 aa11.17□□□□□ -0.62
SLC52A1-201ENST00000254853 PKD1L1Q8TDX9 2849 aa11.16□□□□□ -0.62
SLC52A1-201ENST00000254853 FAM236DA0A1B0GTK5 79 aa11.16□□□□□ -0.62
SLC52A1-201ENST00000254853 FAM236CP0DP71 79 aa11.16□□□□□ -0.62
SLC52A1-201ENST00000254853 SNURFQ9Y675 71 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms