RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 LINC00173Q6ZV60 143 aa6.18□□□□□ -1.42
VPS50-201ENST00000251739 ATP5L2Q7Z4Y8 100 aa6.18□□□□□ -1.42
VPS50-201ENST00000251739 ORMDL3Q8N138 153 aa6.18□□□□□ -1.42
VPS50-201ENST00000251739 LINC01561Q8N1V8 128 aa6.18□□□□□ -1.42
VPS50-201ENST00000251739 GAGE2DQ9UEU5 116 aa6.18□□□□□ -1.42
VPS50-201ENST00000251739 UBE2D1P51668 147 aa6.17□□□□□ -1.42
VPS50-201ENST00000251739 TMEM141Q96I45 108 aa6.17□□□□□ -1.42
VPS50-201ENST00000251739 PRELID3AQ96N28 172 aa6.17□□□□□ -1.42
VPS50-201ENST00000251739 TMEM136Q6ZRR5 245 aa6.16□□□□□ -1.42
VPS50-201ENST00000251739 AMELXQ99217 191 aa6.16□□□□□ -1.42
VPS50-201ENST00000251739 CST9LQ9H4G1 147 aa6.16□□□□□ -1.42
VPS50-201ENST00000251739 UQCR10Q9UDW1 63 aa6.16□□□□□ -1.42
VPS50-201ENST00000251739 LAMTOR2Q9Y2Q5 125 aa6.16□□□□□ -1.42
VPS50-201ENST00000251739 FAM19A3Q7Z5A8 133 aa6.15□□□□□ -1.42
VPS50-201ENST00000251739 YPEL4Q96NS1 127 aa6.15□□□□□ -1.42
VPS50-201ENST00000251739 VAMP8Q9BV40 100 aa6.15□□□□□ -1.42
VPS50-201ENST00000251739 RPL13AP40429 203 aaKnown RBP6.14□□□□□ -1.43
VPS50-201ENST00000251739 UBE2BP63146 152 aa6.14□□□□□ -1.43
VPS50-201ENST00000251739 ZC2HC1BQ5TFG8 222 aa6.14□□□□□ -1.43
VPS50-201ENST00000251739 TEX43Q6ZNM6 134 aa6.14□□□□□ -1.43
VPS50-201ENST00000251739 IGIPA6NJ69 53 aa6.13□□□□□ -1.43
VPS50-201ENST00000251739 VAMP3Q15836 100 aa6.13□□□□□ -1.43
VPS50-201ENST00000251739 C2orf66Q6UXQ4 117 aa6.13□□□□□ -1.43
VPS50-201ENST00000251739 GTF2H5Q6ZYL4 71 aa6.13□□□□□ -1.43
VPS50-201ENST00000251739 CYSLTR1Q9Y271 337 aa6.13□□□□□ -1.43
VPS50-201ENST00000251739 ZNF861PO60384 105 aa6.12□□□□□ -1.43
VPS50-201ENST00000251739 TRGC2P03986 189 aa6.12□□□□□ -1.43
VPS50-201ENST00000251739 Q6ZN92 141 aa6.12□□□□□ -1.43
VPS50-201ENST00000251739 Q8IZM0 81 aa6.12□□□□□ -1.43
VPS50-201ENST00000251739 Q8N8P6 123 aa6.12□□□□□ -1.43
VPS50-201ENST00000251739 SIGMAR1Q99720 223 aa6.12□□□□□ -1.43
VPS50-201ENST00000251739 MAP1LC3AQ9H492 121 aa6.12□□□□□ -1.43
VPS50-201ENST00000251739 K7EMI3 77 aa6.11□□□□□ -1.43
VPS50-201ENST00000251739 SPANXCQ9NY87 97 aa6.11□□□□□ -1.43
VPS50-201ENST00000251739 TP73-AS1Q9UF72 201 aa6.11□□□□□ -1.43
VPS50-201ENST00000251739 LOC389332A0A1B0GUA5 103 aa6.1□□□□□ -1.43
VPS50-201ENST00000251739 NUPR1O60356 82 aa6.1□□□□□ -1.43
VPS50-201ENST00000251739 ORMDL2Q53FV1 153 aa6.1□□□□□ -1.43
VPS50-201ENST00000251739 XAGE1AQ9HD64 81 aa6.1□□□□□ -1.43
VPS50-201ENST00000251739 C22orf24Q9Y442 160 aa6.1□□□□□ -1.43
VPS50-201ENST00000251739 A0A087X002 238 aa6.09□□□□□ -1.43
VPS50-201ENST00000251739 TRIAP1O43715 76 aa6.09□□□□□ -1.43
VPS50-201ENST00000251739 CKS1BP61024 79 aa6.09□□□□□ -1.43
VPS50-201ENST00000251739 BATFQ16520 125 aa6.09□□□□□ -1.43
VPS50-201ENST00000251739 VCX2Q9H322 139 aa6.09□□□□□ -1.43
VPS50-201ENST00000251739 TOMM7Q9P0U1 55 aa6.09□□□□□ -1.43
VPS50-201ENST00000251739 CDKN2A-AS1Q9UH64 79 aa6.09□□□□□ -1.43
VPS50-201ENST00000251739 F8VRH5 84 aa6.08□□□□□ -1.44
VPS50-201ENST00000251739 PRSS2P07478 247 aa6.08□□□□□ -1.44
VPS50-201ENST00000251739 HERVK_113P63121 156 aa6.08□□□□□ -1.44
VPS50-201ENST00000251739 PRR4Q16378 134 aa6.08□□□□□ -1.44
VPS50-201ENST00000251739 COX19Q49B96 90 aa6.08□□□□□ -1.44
VPS50-201ENST00000251739 PDZD11Q5EBL8 140 aa6.08□□□□□ -1.44
VPS50-201ENST00000251739 C6orf226Q5I0X4 101 aa6.08□□□□□ -1.44
VPS50-201ENST00000251739 TIMM17AQ99595 171 aa6.08□□□□□ -1.44
VPS50-201ENST00000251739 IGLV5-45A0A087WSX0 123 aa6.07□□□□□ -1.44
VPS50-201ENST00000251739 SMIM1B2RUZ4 78 aa6.07□□□□□ -1.44
VPS50-201ENST00000251739 SEC11AP67812 179 aa6.07□□□□□ -1.44
VPS50-201ENST00000251739 PMCHL1Q16048 86 aa6.07□□□□□ -1.44
VPS50-201ENST00000251739 MRPL55Q7Z7F7 128 aaKnown RBP6.07□□□□□ -1.44
VPS50-201ENST00000251739 KRTAP13-1Q8IUC0 172 aa6.07□□□□□ -1.44
VPS50-201ENST00000251739 NXT2Q9NPJ8 142 aaKnown RBP6.07□□□□□ -1.44
VPS50-201ENST00000251739 FAT4Q6V0I7 4981 aa6.07□□□□□ -1.44
VPS50-201ENST00000251739 BCE1O60756 84 aa6.06□□□□□ -1.44
VPS50-201ENST00000251739 CXCL5P42830 114 aa6.06□□□□□ -1.44
VPS50-201ENST00000251739 KRTAP15-1Q3LI76 137 aa6.06□□□□□ -1.44
VPS50-201ENST00000251739 PAPPA-AS1Q5QFB9 102 aa6.06□□□□□ -1.44
VPS50-201ENST00000251739 TOMM6Q96B49 74 aa6.06□□□□□ -1.44
VPS50-201ENST00000251739 MUC17Q685J3 4493 aa6.05□□□□□ -1.44
VPS50-201ENST00000251739 IGLV5-37A0A075B6J1 123 aa6.05□□□□□ -1.44
VPS50-201ENST00000251739 RPL28P46779 137 aaKnown RBP6.05□□□□□ -1.44
VPS50-201ENST00000251739 RPL24P83731 157 aaKnown RBP6.05□□□□□ -1.44
VPS50-201ENST00000251739 TRAV9-1A0A075B6T8 112 aa6.04□□□□□ -1.44
VPS50-201ENST00000251739 A6NDN8 102 aa6.04□□□□□ -1.44
VPS50-201ENST00000251739 KRTAP13-2Q52LG2 175 aa6.04□□□□□ -1.44
VPS50-201ENST00000251739 FA2HQ7L5A8 372 aa6.04□□□□□ -1.44
VPS50-201ENST00000251739 ERASQ7Z444 233 aa6.04□□□□□ -1.44
VPS50-201ENST00000251739 LINC00167Q96N53 147 aa6.04□□□□□ -1.44
VPS50-201ENST00000251739 GEMIN7Q9H840 131 aaKnown RBP6.04□□□□□ -1.44
VPS50-201ENST00000251739 TINCRA0A1B0GVN0 87 aa6.03□□□□□ -1.44
VPS50-201ENST00000251739 LINC01546A6NGU7 62 aa6.03□□□□□ -1.44
VPS50-201ENST00000251739 TSPAN13O95857 204 aa6.03□□□□□ -1.44
VPS50-201ENST00000251739 CRYGAP11844 174 aa6.03□□□□□ -1.44
VPS50-201ENST00000251739 COX7B2Q8TF08 81 aa6.03□□□□□ -1.44
VPS50-201ENST00000251739 PMCHL2Q9BQD1 86 aa6.03□□□□□ -1.44
VPS50-201ENST00000251739 GAGE10A6NGK3 116 aa6.02□□□□□ -1.45
VPS50-201ENST00000251739 C5orf47Q569G3 176 aa6.02□□□□□ -1.45
VPS50-201ENST00000251739 RPL37AP8A6NKH3 93 aa6.01□□□□□ -1.45
VPS50-201ENST00000251739 KIAA1644Q3SXP7 199 aa6.01□□□□□ -1.45
VPS50-201ENST00000251739 FAM229BQ4G0N7 80 aa6.01□□□□□ -1.45
VPS50-201ENST00000251739 TYMSOSQ8TAI1 123 aa6.01□□□□□ -1.45
VPS50-201ENST00000251739 SCGB3A1Q96QR1 104 aa6.01□□□□□ -1.45
VPS50-201ENST00000251739 SPANXDQ9BXN6 97 aa6.01□□□□□ -1.45
VPS50-201ENST00000251739 LINC01549A6NIU2 74 aa6□□□□□ -1.45
VPS50-201ENST00000251739 IGLC3P0DOY3 106 aa6□□□□□ -1.45
VPS50-201ENST00000251739 ANAPC11Q9NYG5 84 aa6□□□□□ -1.45
VPS50-201ENST00000251739 IGLV5-39A0A0G2JS06 123 aa5.99□□□□□ -1.45
VPS50-201ENST00000251739 A0A0U1RQV1 116 aa5.99□□□□□ -1.45
VPS50-201ENST00000251739 SPINK8P0C7L1 97 aa5.99□□□□□ -1.45
VPS50-201ENST00000251739 SPATA45Q537H7 98 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms