RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 Q8N3U1 123 aa11.96□□□□□ -0.49
SLC1A4-201ENST00000234256 A0A0U1RQV1 116 aa11.96□□□□□ -0.5
SLC1A4-201ENST00000234256 FAM30AQ9NZY2 134 aa11.96□□□□□ -0.5
SLC1A4-201ENST00000234256 Q6ZRU5 148 aa11.95□□□□□ -0.5
SLC1A4-201ENST00000234256 C1orf137Q5JT78 98 aa11.95□□□□□ -0.5
SLC1A4-201ENST00000234256 MUC7Q8TAX7 377 aa11.95□□□□□ -0.5
SLC1A4-201ENST00000234256 IGLV9-49A0A0B4J1Y8 123 aa11.94□□□□□ -0.5
SLC1A4-201ENST00000234256 NDUFC2-KCTD14E9PQ53 114 aa11.94□□□□□ -0.5
SLC1A4-201ENST00000234256 FAM218AQ96MZ4 157 aa11.94□□□□□ -0.5
SLC1A4-201ENST00000234256 SPTSSBQ8NFR3 76 aa11.94□□□□□ -0.5
SLC1A4-201ENST00000234256 NOTCH1P46531 2555 aa11.93□□□□□ -0.5
SLC1A4-201ENST00000234256 M0QXV9 152 aa11.93□□□□□ -0.5
SLC1A4-201ENST00000234256 BOD1L1Q8NFC6 3051 aa11.93□□□□□ -0.5
SLC1A4-201ENST00000234256 STAB1Q9NY15 2570 aa11.92□□□□□ -0.5
SLC1A4-201ENST00000234256 LINC00575Q6W349 94 aa11.91□□□□□ -0.5
SLC1A4-201ENST00000234256 MYO15AQ9UKN7 3530 aa11.91□□□□□ -0.5
SLC1A4-201ENST00000234256 IL17DQ8TAD2 202 aa11.91□□□□□ -0.5
SLC1A4-201ENST00000234256 PLAC8L1A1L4L8 177 aa11.9□□□□□ -0.5
SLC1A4-201ENST00000234256 DEFB116Q30KQ4 102 aa11.89□□□□□ -0.51
SLC1A4-201ENST00000234256 FHL3Q13643 280 aa11.89□□□□□ -0.51
SLC1A4-201ENST00000234256 C10orf25Q5T742 122 aa11.89□□□□□ -0.51
SLC1A4-201ENST00000234256 Q8N9L7 120 aa11.89□□□□□ -0.51
SLC1A4-201ENST00000234256 IGLV5-45A0A087WSX0 123 aa11.88□□□□□ -0.51
SLC1A4-201ENST00000234256 Q6ZVQ6 151 aa11.88□□□□□ -0.51
SLC1A4-201ENST00000234256 EIF4EBP3O60516 100 aaPredicted RBP11.87□□□□□ -0.51
SLC1A4-201ENST00000234256 REV3LO60673 3130 aa11.87□□□□□ -0.51
SLC1A4-201ENST00000234256 TRAV7A0A075B6U4 112 aa11.87□□□□□ -0.51
SLC1A4-201ENST00000234256 DMXL2Q8TDJ6 3036 aa11.86□□□□□ -0.51
SLC1A4-201ENST00000234256 GCN1Q92616 2671 aaKnown RBP11.86□□□□□ -0.51
SLC1A4-201ENST00000234256 NDUFC1O43677 76 aa11.85□□□□□ -0.51
SLC1A4-201ENST00000234256 LY6G6CO95867 125 aa11.84□□□□□ -0.51
SLC1A4-201ENST00000234256 X6R8D5 127 aa11.84□□□□□ -0.51
SLC1A4-201ENST00000234256 A0A087WSZ3 146 aa11.84□□□□□ -0.51
SLC1A4-201ENST00000234256 LINC00208Q96KT6 92 aa11.83□□□□□ -0.52
SLC1A4-201ENST00000234256 UBR5O95071 2799 aaPredicted RBP11.83□□□□□ -0.52
SLC1A4-201ENST00000234256 KLK9Q2XQG4 91 aa11.82□□□□□ -0.52
SLC1A4-201ENST00000234256 NBEAL1Q6ZS30 2694 aa11.82□□□□□ -0.52
SLC1A4-201ENST00000234256 PRLHP81277 87 aa11.82□□□□□ -0.52
SLC1A4-201ENST00000234256 TACC2O95359 2948 aa11.81□□□□□ -0.52
SLC1A4-201ENST00000234256 LINC01547P58512 204 aaPredicted RBP11.81□□□□□ -0.52
SLC1A4-201ENST00000234256 REG3GQ6UW15 175 aa11.81□□□□□ -0.52
SLC1A4-201ENST00000234256 ESRGQ1W209 222 aa11.81□□□□□ -0.52
SLC1A4-201ENST00000234256 LITAFQ99732 161 aa11.81□□□□□ -0.52
SLC1A4-201ENST00000234256 UNC79Q9P2D8 2635 aa11.81□□□□□ -0.52
SLC1A4-201ENST00000234256 COL6A5A8TX70 2615 aa11.8□□□□□ -0.52
SLC1A4-201ENST00000234256 KALRNO60229 2985 aa11.8□□□□□ -0.52
SLC1A4-201ENST00000234256 SVIPQ8NHG7 77 aa11.8□□□□□ -0.52
SLC1A4-201ENST00000234256 TRBV7-7A0A0K0K1E9 115 aa11.79□□□□□ -0.52
SLC1A4-201ENST00000234256 C6orf48Q9UBA6 75 aa11.79□□□□□ -0.52
SLC1A4-201ENST00000234256 NBEAL2Q6ZNJ1 2754 aa11.79□□□□□ -0.52
SLC1A4-201ENST00000234256 MRPL55Q7Z7F7 128 aaKnown RBP11.79□□□□□ -0.52
SLC1A4-201ENST00000234256 C2orf48Q96LS8 159 aa11.79□□□□□ -0.52
SLC1A4-201ENST00000234256 CFAP47Q6ZTR5 3102 aa11.79□□□□□ -0.52
SLC1A4-201ENST00000234256 CASC2Q6XLA1 102 aa11.77□□□□□ -0.52
SLC1A4-201ENST00000234256 SBSPONQ8IVN8 264 aa11.77□□□□□ -0.52
SLC1A4-201ENST00000234256 ADGRG4Q8IZF6 3080 aa11.77□□□□□ -0.53
SLC1A4-201ENST00000234256 FSHBP01225 129 aa11.77□□□□□ -0.53
SLC1A4-201ENST00000234256 LINC01561Q8N1V8 128 aa11.76□□□□□ -0.53
SLC1A4-201ENST00000234256 C7orf33Q8WU49 177 aa11.76□□□□□ -0.53
SLC1A4-201ENST00000234256 SPATA3Q8NHX4 192 aa11.75□□□□□ -0.53
SLC1A4-201ENST00000234256 ATMQ13315 3056 aa11.74□□□□□ -0.53
SLC1A4-201ENST00000234256 Q9BRP9 147 aa11.74□□□□□ -0.53
SLC1A4-201ENST00000234256 C22orf24Q9Y442 160 aa11.74□□□□□ -0.53
SLC1A4-201ENST00000234256 SMIM26A0A096LP01 95 aa11.74□□□□□ -0.53
SLC1A4-201ENST00000234256 KIAA0087Q14695 138 aa11.73□□□□□ -0.53
SLC1A4-201ENST00000234256 TMEM254Q8TBM7 123 aa11.72□□□□□ -0.53
SLC1A4-201ENST00000234256 ATP5EP56381 51 aaPredicted RBP11.71□□□□□ -0.53
SLC1A4-201ENST00000234256 ZZEF1O43149 2961 aa11.71□□□□□ -0.53
SLC1A4-201ENST00000234256 LINC00474Q9P2X8 69 aa11.7□□□□□ -0.54
SLC1A4-201ENST00000234256 PRYO14603 147 aa11.7□□□□□ -0.54
SLC1A4-201ENST00000234256 LINC01556Q5JQF7 62 aa11.7□□□□□ -0.54
SLC1A4-201ENST00000234256 CIRBP-AS1Q8TBR5 109 aa11.69□□□□□ -0.54
SLC1A4-201ENST00000234256 FLNCQ14315 2725 aa11.69□□□□□ -0.54
SLC1A4-201ENST00000234256 LINC00167Q96N53 147 aa11.69□□□□□ -0.54
SLC1A4-201ENST00000234256 A6NED7 52 aa11.68□□□□□ -0.54
SLC1A4-201ENST00000234256 ZNF706Q9Y5V0 76 aaPredicted RBP11.68□□□□□ -0.54
SLC1A4-201ENST00000234256 IGHV6-1A0A0B4J1U7 121 aa11.68□□□□□ -0.54
SLC1A4-201ENST00000234256 PCOTHQ58A44 107 aa11.68□□□□□ -0.54
SLC1A4-201ENST00000234256 SERP1Q9Y6X1 66 aa11.67□□□□□ -0.54
SLC1A4-201ENST00000234256 SPTBN5Q9NRC6 3674 aaKnown RBP11.67□□□□□ -0.54
SLC1A4-201ENST00000234256 Q8NAQ8 132 aa11.67□□□□□ -0.54
SLC1A4-201ENST00000234256 SMCR5Q8TEV8 140 aa11.67□□□□□ -0.54
SLC1A4-201ENST00000234256 SEC61GP60059 68 aa11.66□□□□□ -0.54
SLC1A4-201ENST00000234256 COL12A1Q99715 3063 aa11.65□□□□□ -0.54
SLC1A4-201ENST00000234256 ASH1LQ9NR48 2969 aaKnown RBP11.62□□□□□ -0.55
SLC1A4-201ENST00000234256 PSPHP1O15172 72 aa11.62□□□□□ -0.55
SLC1A4-201ENST00000234256 A0A096LNT2 108 aa11.62□□□□□ -0.55
SLC1A4-201ENST00000234256 GIG44P09565 113 aaPredicted RBP11.61□□□□□ -0.55
SLC1A4-201ENST00000234256 ZNF575Q86XF7 245 aa11.61□□□□□ -0.55
SLC1A4-201ENST00000234256 ITPR1Q14643 2758 aa11.61□□□□□ -0.55
SLC1A4-201ENST00000234256 NUPR2A6NF83 97 aa11.61□□□□□ -0.55
SLC1A4-201ENST00000234256 KRTAP24-1Q3LI83 254 aa11.61□□□□□ -0.55
SLC1A4-201ENST00000234256 CSNK1G2-AS1Q8NCQ2 148 aa11.61□□□□□ -0.55
SLC1A4-201ENST00000234256 RETNLBQ9BQ08 111 aa11.6□□□□□ -0.55
SLC1A4-201ENST00000234256 IGSF10Q6WRI0 2623 aa11.6□□□□□ -0.55
SLC1A4-201ENST00000234256 CXCL6P80162 114 aa11.59□□□□□ -0.55
SLC1A4-201ENST00000234256 SMIM29Q86T20 159 aa11.59□□□□□ -0.55
SLC1A4-201ENST00000234256 Q6ZQT0 140 aa11.59□□□□□ -0.55
SLC1A4-201ENST00000234256 V9GYY9 64 aa11.59□□□□□ -0.55
SLC1A4-201ENST00000234256 IGLV5-52A0A0A0MRZ9 124 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms