RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 LINC00575Q6W349 94 aa12.14□□□□□ -0.47
CDKN1B-201ENST00000228872 RMI2Q96E14 147 aa12.14□□□□□ -0.47
CDKN1B-201ENST00000228872 HIVEP1P15822 2718 aa12.14□□□□□ -0.47
CDKN1B-201ENST00000228872 ZNF561-AS1K7EIQ3 104 aa12.14□□□□□ -0.47
CDKN1B-201ENST00000228872 NSD1Q96L73 2696 aaPredicted RBP12.14□□□□□ -0.47
CDKN1B-201ENST00000228872 HAMPP81172 84 aa12.14□□□□□ -0.47
CDKN1B-201ENST00000228872 Q6ZVQ6 151 aa12.14□□□□□ -0.47
CDKN1B-201ENST00000228872 C6orf223Q8N319 242 aa12.13□□□□□ -0.47
CDKN1B-201ENST00000228872 JMJD1CQ15652 2540 aa12.12□□□□□ -0.47
CDKN1B-201ENST00000228872 LAMTOR3Q9UHA4 124 aa12.12□□□□□ -0.47
CDKN1B-201ENST00000228872 NOTCH3Q9UM47 2321 aa12.11□□□□□ -0.47
CDKN1B-201ENST00000228872 F8WEM9 126 aa12.11□□□□□ -0.47
CDKN1B-201ENST00000228872 Q8NDZ9 215 aa12.11□□□□□ -0.47
CDKN1B-201ENST00000228872 SMIM26A0A096LP01 95 aa12.11□□□□□ -0.47
CDKN1B-201ENST00000228872 CLPSL2Q6UWE3 100 aa12.11□□□□□ -0.47
CDKN1B-201ENST00000228872 FP248Q71RG6 208 aaPredicted RBP12.11□□□□□ -0.47
CDKN1B-201ENST00000228872 FN1P02751 2386 aaKnown RBP12.1□□□□□ -0.47
CDKN1B-201ENST00000228872 KRTAP10-3P60369 221 aa12.09□□□□□ -0.47
CDKN1B-201ENST00000228872 COX17Q14061 63 aa12.09□□□□□ -0.47
CDKN1B-201ENST00000228872 KIAA0087Q14695 138 aa12.09□□□□□ -0.47
CDKN1B-201ENST00000228872 CXCL6P80162 114 aa12.08□□□□□ -0.48
CDKN1B-201ENST00000228872 C9orf116Q5BN46 136 aaPredicted RBP12.07□□□□□ -0.48
CDKN1B-201ENST00000228872 RPL35AP18077 110 aaKnown RBP12.06□□□□□ -0.48
CDKN1B-201ENST00000228872 WFDC10AQ9H1F0 79 aa12.06□□□□□ -0.48
CDKN1B-201ENST00000228872 A0A1B0GUV1 79 aa12.05□□□□□ -0.48
CDKN1B-201ENST00000228872 SPATA3Q8NHX4 192 aa12.05□□□□□ -0.48
CDKN1B-201ENST00000228872 C9orf66Q5T8R8 295 aa12.04□□□□□ -0.48
CDKN1B-201ENST00000228872 Q8N3U1 123 aa12.04□□□□□ -0.48
CDKN1B-201ENST00000228872 IGHV4-28A0A0C4DH34 117 aa12.04□□□□□ -0.48
CDKN1B-201ENST00000228872 CSNK1G2-AS1Q8NCQ2 148 aa12.04□□□□□ -0.48
CDKN1B-201ENST00000228872 TM2D3Q9BRN9 247 aa12.04□□□□□ -0.48
CDKN1B-201ENST00000228872 NDUFC1O43677 76 aa12.03□□□□□ -0.48
CDKN1B-201ENST00000228872 PDE6GP18545 87 aa12.03□□□□□ -0.48
CDKN1B-201ENST00000228872 TRBV7-6A0A0J9YX20 115 aa12.03□□□□□ -0.48
CDKN1B-201ENST00000228872 TRBV7-4A0A0J9YYF1 115 aa12.02□□□□□ -0.49
CDKN1B-201ENST00000228872 GYPEP15421 78 aa12.02□□□□□ -0.49
CDKN1B-201ENST00000228872 Q6ZQY7 126 aa12.02□□□□□ -0.49
CDKN1B-201ENST00000228872 LINC00269Q8N2A0 174 aa12.02□□□□□ -0.49
CDKN1B-201ENST00000228872 C1orf43Q9BWL3 253 aa12.02□□□□□ -0.49
CDKN1B-201ENST00000228872 LINC00474Q9P2X8 69 aa12.02□□□□□ -0.49
CDKN1B-201ENST00000228872 CD164L2Q6UWJ8 174 aa12.01□□□□□ -0.49
CDKN1B-201ENST00000228872 MUC7Q8TAX7 377 aa12.01□□□□□ -0.49
CDKN1B-201ENST00000228872 SCXQ7RTU7 201 aa12□□□□□ -0.49
CDKN1B-201ENST00000228872 FLNBO75369 2602 aaKnown RBP11.99□□□□□ -0.49
CDKN1B-201ENST00000228872 DEFB130BP0DP73 79 aa11.99□□□□□ -0.49
CDKN1B-201ENST00000228872 DEFB130AP0DP74 79 aa11.99□□□□□ -0.49
CDKN1B-201ENST00000228872 ATP5EP56381 51 aaPredicted RBP11.99□□□□□ -0.49
CDKN1B-201ENST00000228872 IGLV1-51P01701 117 aa11.99□□□□□ -0.49
CDKN1B-201ENST00000228872 MIFP14174 115 aa11.99□□□□□ -0.49
CDKN1B-201ENST00000228872 CHCHD10Q8WYQ3 142 aaPredicted RBP11.98□□□□□ -0.49
CDKN1B-201ENST00000228872 CMC4P56277 68 aaPredicted RBP11.98□□□□□ -0.49
CDKN1B-201ENST00000228872 F8P00451 2351 aa11.98□□□□□ -0.49
CDKN1B-201ENST00000228872 IGLV6-57P01721 117 aa11.97□□□□□ -0.49
CDKN1B-201ENST00000228872 C19orf73Q9NVV2 129 aa11.97□□□□□ -0.49
CDKN1B-201ENST00000228872 BAHCC1Q9P281 2608 aa11.97□□□□□ -0.49
CDKN1B-201ENST00000228872 IGLV10-54A0A075B6I4 117 aa11.96□□□□□ -0.49
CDKN1B-201ENST00000228872 H3BQ85 93 aa11.96□□□□□ -0.49
CDKN1B-201ENST00000228872 NREPQ16612 68 aa11.96□□□□□ -0.49
CDKN1B-201ENST00000228872 A0A096LPF7 62 aa11.96□□□□□ -0.5
CDKN1B-201ENST00000228872 CYSRT1A8MQ03 144 aa11.95□□□□□ -0.5
CDKN1B-201ENST00000228872 VWFP04275 2813 aa11.95□□□□□ -0.5
CDKN1B-201ENST00000228872 PKIGQ9Y2B9 76 aa11.95□□□□□ -0.5
CDKN1B-201ENST00000228872 C10orf25Q5T742 122 aa11.94□□□□□ -0.5
CDKN1B-201ENST00000228872 TMEM254Q8TBM7 123 aa11.94□□□□□ -0.5
CDKN1B-201ENST00000228872 UNQ6190/PRO20217Q6UXQ8 127 aa11.93□□□□□ -0.5
CDKN1B-201ENST00000228872 BPY2O14599 106 aa11.92□□□□□ -0.5
CDKN1B-201ENST00000228872 LINC00612Q8N6U2 182 aa11.92□□□□□ -0.5
CDKN1B-201ENST00000228872 REG3AQ06141 175 aa11.91□□□□□ -0.5
CDKN1B-201ENST00000228872 ERC2-IT1O76042 136 aa11.9□□□□□ -0.5
CDKN1B-201ENST00000228872 ANGP03950 147 aaKnown RBP11.9□□□□□ -0.5
CDKN1B-201ENST00000228872 TENM1Q9UKZ4 2725 aa11.9□□□□□ -0.5
CDKN1B-201ENST00000228872 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.9□□□□□ -0.5
CDKN1B-201ENST00000228872 DIRC1Q969H9 104 aa11.9□□□□□ -0.5
CDKN1B-201ENST00000228872 FAM229BQ4G0N7 80 aa11.89□□□□□ -0.51
CDKN1B-201ENST00000228872 BRK1Q8WUW1 75 aa11.89□□□□□ -0.51
CDKN1B-201ENST00000228872 SPAG11BQ08648 103 aa11.89□□□□□ -0.51
CDKN1B-201ENST00000228872 PRO0255Q9UI72 69 aa11.89□□□□□ -0.51
CDKN1B-201ENST00000228872 A0A0J9YWU9 116 aa11.87□□□□□ -0.51
CDKN1B-201ENST00000228872 IGHV4-30-4P0DP06 118 aa11.87□□□□□ -0.51
CDKN1B-201ENST00000228872 KRTAP24-1Q3LI83 254 aa11.85□□□□□ -0.51
CDKN1B-201ENST00000228872 COX7BP24311 80 aa11.85□□□□□ -0.51
CDKN1B-201ENST00000228872 Q8N9L7 120 aa11.85□□□□□ -0.51
CDKN1B-201ENST00000228872 A0A0U1RQV1 116 aa11.84□□□□□ -0.51
CDKN1B-201ENST00000228872 PRYO14603 147 aa11.84□□□□□ -0.51
CDKN1B-201ENST00000228872 ZNF73O43830 326 aaPredicted RBP11.83□□□□□ -0.51
CDKN1B-201ENST00000228872 IGKV4-1P06312 121 aa11.83□□□□□ -0.51
CDKN1B-201ENST00000228872 MPLKIPQ8TAP9 179 aa11.83□□□□□ -0.51
CDKN1B-201ENST00000228872 OCR1Q9BZK8 76 aa11.83□□□□□ -0.52
CDKN1B-201ENST00000228872 ELOF1P60002 83 aaKnown RBP11.82□□□□□ -0.52
CDKN1B-201ENST00000228872 ATRQ13535 2644 aa11.82□□□□□ -0.52
CDKN1B-201ENST00000228872 TEP1Q99973 2627 aaKnown RBP11.81□□□□□ -0.52
CDKN1B-201ENST00000228872 XAGE1AQ9HD64 81 aa11.81□□□□□ -0.52
CDKN1B-201ENST00000228872 NBEAL2Q6ZNJ1 2754 aa11.81□□□□□ -0.52
CDKN1B-201ENST00000228872 F8WDY8 70 aa11.8□□□□□ -0.52
CDKN1B-201ENST00000228872 FUSP35637 526 aaKnown RBP eCLIP11.8□□□□□ -0.52
CDKN1B-201ENST00000228872 ESRGQ1W209 222 aa11.79□□□□□ -0.52
CDKN1B-201ENST00000228872 Q6ZTC4 211 aa11.78□□□□□ -0.52
CDKN1B-201ENST00000228872 X6R8D5 127 aa11.78□□□□□ -0.52
CDKN1B-201ENST00000228872 GVQW2A0A096LPI5 108 aaPredicted RBP11.78□□□□□ -0.52
CDKN1B-201ENST00000228872 C1orf195Q5TG92 126 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms