RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 Q6JHZ5 121 aa14.76□□□□□ -0.05
SMARCD2-201ENST00000225742 C6orf48Q9UBA6 75 aa14.76□□□□□ -0.05
SMARCD2-201ENST00000225742 FAM236AA0A1B0GUQ0 79 aa14.75□□□□□ -0.05
SMARCD2-201ENST00000225742 FAM236BA0A1B0GV22 79 aa14.75□□□□□ -0.05
SMARCD2-201ENST00000225742 H3BQ85 93 aa14.75□□□□□ -0.05
SMARCD2-201ENST00000225742 CCDC179H3BU77 68 aa14.74□□□□□ -0.05
SMARCD2-201ENST00000225742 LINC00526Q96FQ7 95 aa14.74□□□□□ -0.05
SMARCD2-201ENST00000225742 RETNQ9HD89 108 aa14.73□□□□□ -0.05
SMARCD2-201ENST00000225742 WFDC10BQ8IUB3 73 aa14.73□□□□□ -0.05
SMARCD2-201ENST00000225742 TEP1Q99973 2627 aaKnown RBP14.73□□□□□ -0.05
SMARCD2-201ENST00000225742 LINC00846Q9NV44 126 aa14.72□□□□□ -0.05
SMARCD2-201ENST00000225742 hADV29S1A0JD25 119 aa14.71□□□□□ -0.05
SMARCD2-201ENST00000225742 ZNF561-AS1K7EIQ3 104 aa14.71□□□□□ -0.05
SMARCD2-201ENST00000225742 KRTAP26-1Q6PEX3 210 aa14.71□□□□□ -0.05
SMARCD2-201ENST00000225742 TENM1Q9UKZ4 2725 aa14.71□□□□□ -0.05
SMARCD2-201ENST00000225742 B5MCH6 92 aa14.71□□□□□ -0.06
SMARCD2-201ENST00000225742 F8WDY8 70 aa14.71□□□□□ -0.06
SMARCD2-201ENST00000225742 RPL18AQ02543 176 aaKnown RBP14.71□□□□□ -0.06
SMARCD2-201ENST00000225742 Q6ZTC4 211 aa14.71□□□□□ -0.06
SMARCD2-201ENST00000225742 C2orf48Q96LS8 159 aa14.7□□□□□ -0.06
SMARCD2-201ENST00000225742 CAMK2N2Q96S95 79 aa14.68□□□□□ -0.06
SMARCD2-201ENST00000225742 HIVEP1P15822 2718 aa14.68□□□□□ -0.06
SMARCD2-201ENST00000225742 ATRQ13535 2644 aa14.67□□□□□ -0.06
SMARCD2-201ENST00000225742 TRAV23DV6A0A075B6W5 121 aa14.66□□□□□ -0.06
SMARCD2-201ENST00000225742 TRBV7-6A0A0J9YX20 115 aa14.66□□□□□ -0.06
SMARCD2-201ENST00000225742 HIST1H4AP62805 103 aaKnown RBP14.66□□□□□ -0.06
SMARCD2-201ENST00000225742 ESRGQ1W209 222 aa14.66□□□□□ -0.06
SMARCD2-201ENST00000225742 LINC01556Q5JQF7 62 aa14.65□□□□□ -0.06
SMARCD2-201ENST00000225742 DIRC1Q969H9 104 aa14.65□□□□□ -0.06
SMARCD2-201ENST00000225742 TRBV10-3A0A0K0K1G6 114 aa14.64□□□□□ -0.07
SMARCD2-201ENST00000225742 KRTAP24-1Q3LI83 254 aa14.63□□□□□ -0.07
SMARCD2-201ENST00000225742 ATP5EP2Q5VTU8 51 aa14.63□□□□□ -0.07
SMARCD2-201ENST00000225742 GHRHP01286 108 aa14.62□□□□□ -0.07
SMARCD2-201ENST00000225742 HIGD2BQ4VC39 106 aa14.62□□□□□ -0.07
SMARCD2-201ENST00000225742 C3orf56Q8N813 242 aa14.62□□□□□ -0.07
SMARCD2-201ENST00000225742 C15orf56Q8N910 161 aa14.62□□□□□ -0.07
SMARCD2-201ENST00000225742 C1orf43Q9BWL3 253 aa14.62□□□□□ -0.07
SMARCD2-201ENST00000225742 XAGE1AQ9HD64 81 aa14.62□□□□□ -0.07
SMARCD2-201ENST00000225742 LOC110117498A0A087WWA1 95 aa14.62□□□□□ -0.07
SMARCD2-201ENST00000225742 DEFB131BA0A096LNP1 70 aa14.62□□□□□ -0.07
SMARCD2-201ENST00000225742 VPREB1P12018 145 aa14.61□□□□□ -0.07
SMARCD2-201ENST00000225742 RBM3P98179 157 aaKnown RBP14.61□□□□□ -0.07
SMARCD2-201ENST00000225742 C11orf45Q8TAV5 145 aa14.61□□□□□ -0.07
SMARCD2-201ENST00000225742 M0R378 163 aa14.6□□□□□ -0.07
SMARCD2-201ENST00000225742 ATOX1O00244 68 aa14.6□□□□□ -0.07
SMARCD2-201ENST00000225742 NDUFC2-KCTD14E9PQ53 114 aa14.59□□□□□ -0.07
SMARCD2-201ENST00000225742 IGKV3D-7A0A0C4DH55 119 aa14.59□□□□□ -0.07
SMARCD2-201ENST00000225742 ZNF73O43830 326 aaPredicted RBP14.59□□□□□ -0.07
SMARCD2-201ENST00000225742 COX7BP24311 80 aa14.59□□□□□ -0.07
SMARCD2-201ENST00000225742 Q6ZRU5 148 aa14.59□□□□□ -0.07
SMARCD2-201ENST00000225742 PDE6GP18545 87 aa14.58□□□□□ -0.08
SMARCD2-201ENST00000225742 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.58□□□□□ -0.08
SMARCD2-201ENST00000225742 SS18L2Q9UHA2 77 aa14.58□□□□□ -0.08
SMARCD2-201ENST00000225742 UQCRQO14949 82 aa14.57□□□□□ -0.08
SMARCD2-201ENST00000225742 C3orf22Q8N5N4 141 aa14.57□□□□□ -0.08
SMARCD2-201ENST00000225742 ELOF1P60002 83 aaKnown RBP14.56□□□□□ -0.08
SMARCD2-201ENST00000225742 Q6ZQT0 140 aa14.56□□□□□ -0.08
SMARCD2-201ENST00000225742 LAMTOR3Q9UHA4 124 aa14.56□□□□□ -0.08
SMARCD2-201ENST00000225742 Q6ZQY7 126 aa14.55□□□□□ -0.08
SMARCD2-201ENST00000225742 DNAH10OSP0CZ25 163 aa14.54□□□□□ -0.08
SMARCD2-201ENST00000225742 UBL5Q9BZL1 73 aa14.54□□□□□ -0.08
SMARCD2-201ENST00000225742 IGKV2D-24A0A075B6R9 120 aa14.52□□□□□ -0.08
SMARCD2-201ENST00000225742 COX7CP15954 63 aa14.52□□□□□ -0.09
SMARCD2-201ENST00000225742 SYCNQ0VAF6 134 aa14.51□□□□□ -0.09
SMARCD2-201ENST00000225742 DSCR8Q96T75 97 aa14.51□□□□□ -0.09
SMARCD2-201ENST00000225742 TRAV10A0A0B4J240 114 aa14.49□□□□□ -0.09
SMARCD2-201ENST00000225742 C9orf153Q5TBE3 101 aa14.48□□□□□ -0.09
SMARCD2-201ENST00000225742 TRRAPQ9Y4A5 3859 aa14.46□□□□□ -0.09
SMARCD2-201ENST00000225742 Q6ZRP5 223 aa14.45□□□□□ -0.1
SMARCD2-201ENST00000225742 LINC00528Q8N1L1 170 aa14.45□□□□□ -0.1
SMARCD2-201ENST00000225742 TLX1NBP0CAT3 122 aa14.44□□□□□ -0.1
SMARCD2-201ENST00000225742 USP17L23D6RBM5 183 aa14.43□□□□□ -0.1
SMARCD2-201ENST00000225742 A0A087WVE0 104 aa14.42□□□□□ -0.1
SMARCD2-201ENST00000225742 PLA2G2DQ9UNK4 145 aa14.42□□□□□ -0.1
SMARCD2-201ENST00000225742 TRBV7-4A0A0J9YYF1 115 aa14.41□□□□□ -0.1
SMARCD2-201ENST00000225742 CRYGAP11844 174 aa14.41□□□□□ -0.1
SMARCD2-201ENST00000225742 SERP2Q8N6R1 65 aa14.41□□□□□ -0.1
SMARCD2-201ENST00000225742 RMI2Q96E14 147 aa14.4□□□□□ -0.1
SMARCD2-201ENST00000225742 KCNQ1DNQ9H478 68 aa14.4□□□□□ -0.1
SMARCD2-201ENST00000225742 F8P00451 2351 aa14.39□□□□□ -0.11
SMARCD2-201ENST00000225742 NKAPP1Q8N9T2 125 aa14.39□□□□□ -0.11
SMARCD2-201ENST00000225742 TM2D3Q9BRN9 247 aa14.38□□□□□ -0.11
SMARCD2-201ENST00000225742 LINC00588Q9Y4M8 146 aa14.38□□□□□ -0.11
SMARCD2-201ENST00000225742 MRAPQ8TCY5 172 aa14.37□□□□□ -0.11
SMARCD2-201ENST00000225742 Q6ZVQ6 151 aa14.35□□□□□ -0.11
SMARCD2-201ENST00000225742 IGLV5-37A0A075B6J1 123 aa14.34□□□□□ -0.11
SMARCD2-201ENST00000225742 UPK3BQ9BT76 320 aa14.34□□□□□ -0.11
SMARCD2-201ENST00000225742 M0R2N4 97 aa14.34□□□□□ -0.11
SMARCD2-201ENST00000225742 BCE1O60756 84 aa14.34□□□□□ -0.11
SMARCD2-201ENST00000225742 CXCL6P80162 114 aa14.34□□□□□ -0.11
SMARCD2-201ENST00000225742 FAM19A1Q7Z5A9 133 aa14.34□□□□□ -0.11
SMARCD2-201ENST00000225742 C7orf33Q8WU49 177 aa14.34□□□□□ -0.11
SMARCD2-201ENST00000225742 LINC01547P58512 204 aaPredicted RBP14.33□□□□□ -0.12
SMARCD2-201ENST00000225742 DNAH3Q8TD57 4116 aa14.32□□□□□ -0.12
SMARCD2-201ENST00000225742 SERTAD4-AS1Q5TG53 156 aa14.31□□□□□ -0.12
SMARCD2-201ENST00000225742 CMYA5Q8N3K9 4069 aa14.3□□□□□ -0.12
SMARCD2-201ENST00000225742 PRYO14603 147 aa14.29□□□□□ -0.12
SMARCD2-201ENST00000225742 DHRS4-AS1Q9P1J3 65 aa14.28□□□□□ -0.12
SMARCD2-201ENST00000225742 HAMPP81172 84 aa14.27□□□□□ -0.12
SMARCD2-201ENST00000225742 K7EIL1 84 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 1220.4 ms