RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Ighv14-3A0A075B5R9 117 aa10.26□□□□□ -0.77
Nup88-203ENSMUST00000108531 Trav7n-5A0A075B604 112 aa10.26□□□□□ -0.77
Nup88-203ENSMUST00000108531 Ovol3D3YYM0 189 aa10.26□□□□□ -0.77
Nup88-203ENSMUST00000108531 Gm15056F6ZR08 88 aa10.26□□□□□ -0.77
Nup88-203ENSMUST00000108531 Plscr4P58196 326 aa10.26□□□□□ -0.77
Nup88-203ENSMUST00000108531 ElaneQ3UP87 265 aa10.26□□□□□ -0.77
Nup88-203ENSMUST00000108531 Ndfip1Q8R0W6 221 aa10.26□□□□□ -0.77
Nup88-203ENSMUST00000108531 HeylQ9DBX7 326 aa10.26□□□□□ -0.77
Nup88-203ENSMUST00000108531 Zfp109A0A0U1RPC5 652 aa10.25□□□□□ -0.77
Nup88-203ENSMUST00000108531 Gfra1P97785 468 aa10.25□□□□□ -0.77
Nup88-203ENSMUST00000108531 Fam216bQ8CC14 138 aa10.25□□□□□ -0.77
Nup88-203ENSMUST00000108531 Errfi1Q99JZ7 461 aa10.25□□□□□ -0.77
Nup88-203ENSMUST00000108531 Lamtor2Q9JHS3 125 aa10.25□□□□□ -0.77
Nup88-203ENSMUST00000108531 Zfp53Q9Z117 652 aa10.25□□□□□ -0.77
Nup88-203ENSMUST00000108531 CampP51437 172 aa10.25□□□□□ -0.77
Nup88-203ENSMUST00000108531 NpyP57774 97 aa10.25□□□□□ -0.77
Nup88-203ENSMUST00000108531 Arhgef17Q80U35 2057 aa10.25□□□□□ -0.77
Nup88-203ENSMUST00000108531 C1qtnf5Q8K479 243 aa10.25□□□□□ -0.77
Nup88-203ENSMUST00000108531 Platr25A0A1Y7VIZ1 466 aa10.24□□□□□ -0.77
Nup88-203ENSMUST00000108531 CebpdQ00322 268 aa10.24□□□□□ -0.77
Nup88-203ENSMUST00000108531 1700003H04RikE9PXM2 192 aa10.24□□□□□ -0.77
Nup88-203ENSMUST00000108531 SeleQ00690 612 aa10.24□□□□□ -0.77
Nup88-203ENSMUST00000108531 Q497N7 227 aa10.24□□□□□ -0.77
Nup88-203ENSMUST00000108531 Chchd5Q9CQP3 110 aa10.24□□□□□ -0.77
Nup88-203ENSMUST00000108531 AtrxQ61687 2476 aaKnown RBP10.24□□□□□ -0.77
Nup88-203ENSMUST00000108531 SpenQ62504 3644 aaKnown RBP10.24□□□□□ -0.77
Nup88-203ENSMUST00000108531 Ros1Q78DX7 2340 aa10.23□□□□□ -0.77
Nup88-203ENSMUST00000108531 Trav14d-1A0A075B6B1 121 aa10.23□□□□□ -0.77
Nup88-203ENSMUST00000108531 eef1akmt3D3YWP0 232 aa10.23□□□□□ -0.77
Nup88-203ENSMUST00000108531 Nat8f4G5E8L3 226 aa10.23□□□□□ -0.77
Nup88-203ENSMUST00000108531 Rnf182Q8C432 247 aa10.23□□□□□ -0.77
Nup88-203ENSMUST00000108531 Olfr1336Q8VGH5 314 aa10.23□□□□□ -0.77
Nup88-203ENSMUST00000108531 Olfr1256Q8VGP1 306 aa10.23□□□□□ -0.77
Nup88-203ENSMUST00000108531 Cend1Q9JKC6 149 aa10.23□□□□□ -0.77
Nup88-203ENSMUST00000108531 DysfQ9ESD7 2090 aa10.23□□□□□ -0.77
Nup88-203ENSMUST00000108531 Trav6d-7A0A075B6B0 112 aa10.23□□□□□ -0.77
Nup88-203ENSMUST00000108531 LoxP28301 411 aa10.23□□□□□ -0.77
Nup88-203ENSMUST00000108531 Q24JP4 165 aa10.23□□□□□ -0.77
Nup88-203ENSMUST00000108531 Zfp92Q62396 488 aa10.23□□□□□ -0.77
Nup88-203ENSMUST00000108531 Tmem189Q99LQ7 271 aa10.23□□□□□ -0.77
Nup88-203ENSMUST00000108531 Srd5a2Q99N99 254 aa10.23□□□□□ -0.77
Nup88-203ENSMUST00000108531 Mrpl32Q9DCI9 187 aaKnown RBP10.23□□□□□ -0.77
Nup88-203ENSMUST00000108531 SpegQ62407 3262 aa10.22□□□□□ -0.77
Nup88-203ENSMUST00000108531 Vmn1r1E9PVR6 306 aa10.22□□□□□ -0.77
Nup88-203ENSMUST00000108531 Spsb3Q571F5 354 aa10.22□□□□□ -0.77
Nup88-203ENSMUST00000108531 Olfr823Q7TRH2 315 aa10.22□□□□□ -0.77
Nup88-203ENSMUST00000108531 Gm10190Q8BSD7 107 aa10.22□□□□□ -0.77
Nup88-203ENSMUST00000108531 Gm26566Q8CAC1 153 aa10.22□□□□□ -0.77
Nup88-203ENSMUST00000108531 Olfr824Q8VFU4 315 aa10.22□□□□□ -0.77
Nup88-203ENSMUST00000108531 Klf13Q9JJZ6 289 aa10.22□□□□□ -0.77
Nup88-203ENSMUST00000108531 Trbv31A0A075B5J5 111 aa10.22□□□□□ -0.77
Nup88-203ENSMUST00000108531 9130213A22RikQ3V3T2 120 aa10.22□□□□□ -0.77
Nup88-203ENSMUST00000108531 Cox7a2lQ61387 111 aa10.22□□□□□ -0.77
Nup88-203ENSMUST00000108531 C1qtnf4Q8R066 326 aa10.22□□□□□ -0.77
Nup88-203ENSMUST00000108531 Vmn1r216Q8R257 298 aa10.22□□□□□ -0.77
Nup88-203ENSMUST00000108531 Olfr975Q8VG91 310 aa10.22□□□□□ -0.77
Nup88-203ENSMUST00000108531 Ube2v1Q9CZY3 147 aa10.22□□□□□ -0.77
Nup88-203ENSMUST00000108531 Ahctf1Q8CJF7 2243 aaKnown RBP10.21□□□□□ -0.77
Nup88-203ENSMUST00000108531 Olfr1192-ps1A0A1L1SRD7 309 aa10.21□□□□□ -0.77
Nup88-203ENSMUST00000108531 Wfdc11A2A5H7 82 aa10.21□□□□□ -0.77
Nup88-203ENSMUST00000108531 F2rl1P55086 399 aa10.21□□□□□ -0.77
Nup88-203ENSMUST00000108531 Mrps21P58059 87 aa10.21□□□□□ -0.77
Nup88-203ENSMUST00000108531 Ifi27Q8C6G0 260 aa10.21□□□□□ -0.77
Nup88-203ENSMUST00000108531 Dkk4Q8VEJ3 221 aa10.21□□□□□ -0.77
Nup88-203ENSMUST00000108531 Dmxl2Q8BPN8 3032 aa10.21□□□□□ -0.78
Nup88-203ENSMUST00000108531 RelnQ60841 3461 aa10.21□□□□□ -0.78
Nup88-203ENSMUST00000108531 Trav6-6A0A075B603 114 aa10.21□□□□□ -0.78
Nup88-203ENSMUST00000108531 Vmn1r60G3UY47 300 aa10.21□□□□□ -0.78
Nup88-203ENSMUST00000108531 Gm3512L7N206 146 aa10.21□□□□□ -0.78
Nup88-203ENSMUST00000108531 Cnih1O35372 144 aa10.21□□□□□ -0.78
Nup88-203ENSMUST00000108531 Tmem241Q3UME2 297 aa10.21□□□□□ -0.78
Nup88-203ENSMUST00000108531 Bsph1Q3UW26 133 aa10.21□□□□□ -0.78
Nup88-203ENSMUST00000108531 Gm10188Q3V432 135 aa10.21□□□□□ -0.78
Nup88-203ENSMUST00000108531 Cypt1Q8CH20 168 aa10.21□□□□□ -0.78
Nup88-203ENSMUST00000108531 Pygo1Q9D0P5 417 aa10.21□□□□□ -0.78
Nup88-203ENSMUST00000108531 Plekhb2Q9QZC7 221 aa10.21□□□□□ -0.78
Nup88-203ENSMUST00000108531 Tln2Q71LX4 2375 aa10.2□□□□□ -0.78
Nup88-203ENSMUST00000108531 Ighv5-6A0A075B5Q0 117 aa10.2□□□□□ -0.78
Nup88-203ENSMUST00000108531 Plcxd2B2RXA1 340 aa10.2□□□□□ -0.78
Nup88-203ENSMUST00000108531 Gm21983D6RFS9 131 aa10.2□□□□□ -0.78
Nup88-203ENSMUST00000108531 Saa3P04918 122 aa10.2□□□□□ -0.78
Nup88-203ENSMUST00000108531 Higd1cQ76I25 96 aa10.2□□□□□ -0.78
Nup88-203ENSMUST00000108531 Olfr433Q7TRV9 314 aa10.2□□□□□ -0.78
Nup88-203ENSMUST00000108531 Fam206aQ80ZQ9 193 aaKnown RBP10.2□□□□□ -0.78
Nup88-203ENSMUST00000108531 9230109A22RikQ8BHE6 111 aa10.2□□□□□ -0.78
Nup88-203ENSMUST00000108531 4930474N05RikQ8BVR5 218 aa10.2□□□□□ -0.78
Nup88-203ENSMUST00000108531 Cphx2Q8BX39 182 aa10.2□□□□□ -0.78
Nup88-203ENSMUST00000108531 Fbxl15Q91W61 300 aa10.2□□□□□ -0.78
Nup88-203ENSMUST00000108531 Lyzl1Q9CPX3 148 aa10.2□□□□□ -0.78
Nup88-203ENSMUST00000108531 Malsu1Q9CWV0 228 aa10.2□□□□□ -0.78
Nup88-203ENSMUST00000108531 Lypd8Q9D7S0 255 aa10.2□□□□□ -0.78
Nup88-203ENSMUST00000108531 EppinQ9DA01 134 aa10.2□□□□□ -0.78
Nup88-203ENSMUST00000108531 Ighv14-2A0A075B5R7 117 aa10.19□□□□□ -0.78
Nup88-203ENSMUST00000108531 Rtl10D3YWW5 146 aa10.19□□□□□ -0.78
Nup88-203ENSMUST00000108531 Ca2P00920 260 aaKnown RBP10.19□□□□□ -0.78
Nup88-203ENSMUST00000108531 Olfr150Q60895 312 aa10.19□□□□□ -0.78
Nup88-203ENSMUST00000108531 Rab9aQ9R0M6 201 aa10.19□□□□□ -0.78
Nup88-203ENSMUST00000108531 Ighv7-3A0A075B5R2 120 aa10.19□□□□□ -0.78
Nup88-203ENSMUST00000108531 Trdv1A0A075B657 112 aa10.19□□□□□ -0.78
Nup88-203ENSMUST00000108531 Gm6871L7N248 545 aa10.19□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 73.4 ms