RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 BsgP18572 389 aaKnown RBP17.99■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Spink11Q09TK7 88 aa17.99■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Atp6v0e1Q9CQD8 81 aa17.99■□□□□ 0.47
Upf3a-201ENSMUST00000043767 GgctQ9D7X8 188 aa17.99■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Arpc1aQ9R0Q6 370 aa17.99■□□□□ 0.47
Upf3a-201ENSMUST00000043767 CubnQ9JLB4 3623 aa17.99■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Olfr1116E9PXB8 307 aa17.99■□□□□ 0.47
Upf3a-201ENSMUST00000043767 PlaurP35456 327 aa17.99■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Tmem167bQ80X45 74 aa17.99■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Commd9Q8K2Q0 198 aa17.99■□□□□ 0.47
Upf3a-201ENSMUST00000043767 SmagpQ99KC7 97 aa17.99■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Cbln1Q9R171 193 aa17.99■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Mettl8A2AUU0 281 aa17.98■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Timp3P39876 211 aa17.98■□□□□ 0.47
Upf3a-201ENSMUST00000043767 TirapQ99JY1 241 aa17.98■□□□□ 0.47
Upf3a-201ENSMUST00000043767 ManfQ9CXI5 179 aaKnown RBP17.98■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Tstd1E9PY03 133 aa17.97■□□□□ 0.47
Upf3a-201ENSMUST00000043767 BC100530Q497J0 97 aa17.97■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Il31Q6EAL8 163 aa17.97■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Ifi27l2bQ8VC49 283 aa17.97■□□□□ 0.47
Upf3a-201ENSMUST00000043767 P01915 264 aa17.97■□□□□ 0.47
Upf3a-201ENSMUST00000043767 S100a10P08207 97 aa17.97■□□□□ 0.47
Upf3a-201ENSMUST00000043767 SnrpcQ62241 159 aa17.97■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Olfr1258Q8VGN6 311 aa17.97■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Tmem189Q99LQ7 271 aa17.97■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Q9D8L0 127 aa17.97■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Trbv31A0A075B5J5 111 aa17.96■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Zfp950A0A0U1RQ46 609 aa17.96■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Vma21-psA0A140T8R2 101 aa17.96■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Gm15293D3YX02 93 aa17.96■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Rplp1P47955 114 aa17.96■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Rpl19P84099 196 aaKnown RBP17.96■□□□□ 0.47
Upf3a-201ENSMUST00000043767 KhkP97328 298 aa17.96■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Wipf2Q6PEV3 440 aa17.96■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Mien1Q9CQ86 115 aa17.96■□□□□ 0.47
Upf3a-201ENSMUST00000043767 Gm10842Q3U587 122 aa17.95■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Gm5218F6YH22 154 aa17.95■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Il3raP26952 396 aa17.95■□□□□ 0.46
Upf3a-201ENSMUST00000043767 EpcamQ99JW5 315 aa17.95■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Ighv3-1A0A075B5S6 116 aa17.94■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Trav12d-3A0A075B6A4 115 aa17.94■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Gm5089A1L3C8 106 aa17.94■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Mob4Q6PEB6 225 aa17.94■□□□□ 0.46
Upf3a-201ENSMUST00000043767 RetnlgQ8K426 117 aa17.94■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Olfr983Q8VG90 315 aa17.94■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Spata25Q9DA57 226 aa17.94■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Nf1Q04690 2841 aa17.94■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Ighv6-3A0A075B5T2 118 aa17.94■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Ighv1-15A0A0A6YXA5 117 aa17.94■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP17.94■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Scgb2a2J3KMP9 96 aa17.94■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Ascl2O35885 263 aa17.94■□□□□ 0.46
Upf3a-201ENSMUST00000043767 PpoxP51175 477 aa17.94■□□□□ 0.46
Upf3a-201ENSMUST00000043767 OstcQ78XF5 149 aa17.94■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Cox19Q8K0C8 92 aa17.94■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Tmem129Q8K304 362 aa17.94■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Nudt3Q9JI46 168 aa17.94■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Gm14325A2AW67 498 aa17.93■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Olfr218E9PWV2 313 aa17.93■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Gm21994F6T2D2 329 aa17.93■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Ccl12Q62401 104 aa17.93■□□□□ 0.46
Upf3a-201ENSMUST00000043767 RpeQ8VEE0 228 aa17.93■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Gata2O09100 480 aa17.92■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Olfr958Q8VEY3 312 aa17.92■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Etfrf1Q91V16 86 aa17.92■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Cxcr6Q9EQ16 351 aa17.92■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Rab9aQ9R0M6 201 aa17.92■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Trav13n-4A0A0G2JG01 110 aa17.92■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Ifna5P07349 189 aa17.92■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Bmp5P49003 452 aa17.92■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Hist1h1tQ07133 208 aa17.92■□□□□ 0.46
Upf3a-201ENSMUST00000043767 1700009N14RikQ14AA6 216 aaKnown RBP17.92■□□□□ 0.46
Upf3a-201ENSMUST00000043767 COA4Q8BT51 87 aa17.92■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Spink10Q8CAC8 162 aa17.92■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Rpp25lQ99JH1 163 aa17.92■□□□□ 0.46
Upf3a-201ENSMUST00000043767 TecrQ9CY27 308 aa17.92■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Tmem210Q9D2F0 147 aa17.92■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Olfr978E9Q985 311 aa17.91■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Ifna14Q810G3 189 aa17.91■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Atg101Q9D8Z6 218 aa17.91■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Timm10bQ9WV96 100 aa17.91■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Pard6aQ9Z101 346 aa17.91■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Spem1Q5F289 310 aa17.91■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Olfr963Q7TRA9 311 aa17.91■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Rgs13Q8K443 158 aa17.91■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Tmem190Q9D2E9 166 aa17.91■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Ankhd1E9PUR0 2548 aaKnown RBP17.9■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Sult1a1P52840 291 aa17.9■□□□□ 0.46
Upf3a-201ENSMUST00000043767 BlcapP62951 87 aa17.9■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Prr9Q8BV84 116 aa17.9■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Tnfrsf13cQ9D8D0 175 aa17.9■□□□□ 0.46
Upf3a-201ENSMUST00000043767 Gm5741B2RVA4 72 aa17.89■□□□□ 0.45
Upf3a-201ENSMUST00000043767 Mapk1ip1Q9D7G9 263 aa17.89■□□□□ 0.45
Upf3a-201ENSMUST00000043767 Pmp2P24526 132 aa17.89■□□□□ 0.45
Upf3a-201ENSMUST00000043767 H2-DMb2Q31099 261 aa17.89■□□□□ 0.45
Upf3a-201ENSMUST00000043767 Rph3alQ768S4 302 aa17.89■□□□□ 0.45
Upf3a-201ENSMUST00000043767 Rnase4Q9JJH1 148 aa17.89■□□□□ 0.45
Upf3a-201ENSMUST00000043767 Ctnnbip1Q9JJN6 81 aa17.89■□□□□ 0.45
Upf3a-201ENSMUST00000043767 Pf4Q9Z126 105 aa17.89■□□□□ 0.45
Upf3a-201ENSMUST00000043767 Epg5Q80TA9 2572 aa17.88■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 67.9 ms