RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 TRBV6-4A0A1B0GX49 114 aa4.06□□□□□ -1.76
SCARB2-218ENST00000639715 H3BS24 57 aa4.06□□□□□ -1.76
SCARB2-218ENST00000639715 NDUFS5O43920 106 aa4.06□□□□□ -1.76
SCARB2-218ENST00000639715 UBE2AP49459 152 aa4.06□□□□□ -1.76
SCARB2-218ENST00000639715 C9orf66Q5T8R8 295 aa4.06□□□□□ -1.76
SCARB2-218ENST00000639715 RBM12B-AS1Q9P1G2 102 aa4.06□□□□□ -1.76
SCARB2-218ENST00000639715 PROK1P58294 105 aa4.06□□□□□ -1.76
SCARB2-218ENST00000639715 ZNF843Q8N446 348 aa4.06□□□□□ -1.76
SCARB2-218ENST00000639715 TM2D3Q9BRN9 247 aa4.06□□□□□ -1.76
SCARB2-218ENST00000639715 LINC01547P58512 204 aaPredicted RBP4.05□□□□□ -1.76
SCARB2-218ENST00000639715 FLNBO75369 2602 aaKnown RBP4.05□□□□□ -1.76
SCARB2-218ENST00000639715 LINC00315P59091 139 aa4.05□□□□□ -1.76
SCARB2-218ENST00000639715 PRO0255Q9UI72 69 aa4.05□□□□□ -1.76
SCARB2-218ENST00000639715 C16orf95Q9H693 158 aa4.05□□□□□ -1.76
SCARB2-218ENST00000639715 Q9UF83 564 aa4.05□□□□□ -1.76
SCARB2-218ENST00000639715 TLN2Q9Y4G6 2542 aa4.04□□□□□ -1.76
SCARB2-218ENST00000639715 H3BQ85 93 aa4.04□□□□□ -1.76
SCARB2-218ENST00000639715 PDE6GP18545 87 aa4.04□□□□□ -1.76
SCARB2-218ENST00000639715 KTN1-AS1Q86SY8 53 aa4.04□□□□□ -1.76
SCARB2-218ENST00000639715 IBA57-AS1B1ANH7 110 aa4.04□□□□□ -1.76
SCARB2-218ENST00000639715 BEAN1Q3B7T3 259 aa4.04□□□□□ -1.76
SCARB2-218ENST00000639715 SZT2Q5T011 3432 aa4.04□□□□□ -1.76
SCARB2-218ENST00000639715 SPART-AS1P0CW21 52 aa4.04□□□□□ -1.76
SCARB2-218ENST00000639715 C9orf129Q5T035 196 aaKnown RBP4.04□□□□□ -1.76
SCARB2-218ENST00000639715 VPREB1P12018 145 aa4.03□□□□□ -1.76
SCARB2-218ENST00000639715 Q6ZVQ6 151 aa4.03□□□□□ -1.76
SCARB2-218ENST00000639715 LINC00337Q8N6G1 96 aa4.03□□□□□ -1.76
SCARB2-218ENST00000639715 LAMA2P24043 3122 aaKnown RBP4.03□□□□□ -1.76
SCARB2-218ENST00000639715 LINC00269Q8N2A0 174 aa4.03□□□□□ -1.76
SCARB2-218ENST00000639715 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.03□□□□□ -1.76
SCARB2-218ENST00000639715 PRUNE2Q8WUY3 3088 aa4.03□□□□□ -1.76
SCARB2-218ENST00000639715 A0A096LPF7 62 aa4.03□□□□□ -1.76
SCARB2-218ENST00000639715 TRBV6-8A0A0A6YYG3 113 aa4.03□□□□□ -1.76
SCARB2-218ENST00000639715 Q6ZRU5 148 aa4.03□□□□□ -1.76
SCARB2-218ENST00000639715 NTM-AS1Q6ZSK4 140 aa4.03□□□□□ -1.76
SCARB2-218ENST00000639715 PRR15LQ9BU68 103 aa4.03□□□□□ -1.76
SCARB2-218ENST00000639715 CHCHD7Q9BUK0 85 aa4.03□□□□□ -1.76
SCARB2-218ENST00000639715 A8MUN3 132 aa4.02□□□□□ -1.77
SCARB2-218ENST00000639715 CLPSL2Q6UWE3 100 aa4.02□□□□□ -1.77
SCARB2-218ENST00000639715 HIGD2AQ9BW72 106 aa4.02□□□□□ -1.77
SCARB2-218ENST00000639715 ODF3L2Q3SX64 289 aa4.02□□□□□ -1.77
SCARB2-218ENST00000639715 C11orf45Q8TAV5 145 aa4.02□□□□□ -1.77
SCARB2-218ENST00000639715 CELA1Q9UNI1 258 aa4.02□□□□□ -1.77
SCARB2-218ENST00000639715 LAMA3Q16787 3333 aa4.02□□□□□ -1.77
SCARB2-218ENST00000639715 CCL18P55774 89 aa4.02□□□□□ -1.77
SCARB2-218ENST00000639715 FAM229BQ4G0N7 80 aa4.02□□□□□ -1.77
SCARB2-218ENST00000639715 C18orf65Q6ZTR6 163 aa4.02□□□□□ -1.77
SCARB2-218ENST00000639715 C6orf223Q8N319 242 aa4.02□□□□□ -1.77
SCARB2-218ENST00000639715 BBC3Q96PG8 261 aaPredicted RBP4.02□□□□□ -1.77
SCARB2-218ENST00000639715 CDC42SE2Q9NRR3 84 aa4.02□□□□□ -1.77
SCARB2-218ENST00000639715 LINC00242Q5T6M2 205 aa4.02□□□□□ -1.77
SCARB2-218ENST00000639715 ZNF292O60281 2723 aa4.01□□□□□ -1.77
SCARB2-218ENST00000639715 IGHV4-28A0A0C4DH34 117 aa4.01□□□□□ -1.77
SCARB2-218ENST00000639715 SERTAD4-AS1Q5TG53 156 aa4.01□□□□□ -1.77
SCARB2-218ENST00000639715 UBE2DNLQ8IWF7 75 aa4.01□□□□□ -1.77
SCARB2-218ENST00000639715 LINC01006Q8NI28 216 aa4.01□□□□□ -1.77
SCARB2-218ENST00000639715 ZNF73O43830 326 aaPredicted RBP4.01□□□□□ -1.77
SCARB2-218ENST00000639715 COX6A2Q02221 97 aa4.01□□□□□ -1.77
SCARB2-218ENST00000639715 FAM30AQ9NZY2 134 aa4.01□□□□□ -1.77
SCARB2-218ENST00000639715 Q8N814 137 aa4□□□□□ -1.77
SCARB2-218ENST00000639715 C11orf72Q8NBR9 251 aa4□□□□□ -1.77
SCARB2-218ENST00000639715 UNC80Q8N2C7 3258 aa4□□□□□ -1.77
SCARB2-218ENST00000639715 POLQO75417 2590 aa4□□□□□ -1.77
SCARB2-218ENST00000639715 HCG22E2RYF7 251 aa4□□□□□ -1.77
SCARB2-218ENST00000639715 PRM2P04554 102 aa4□□□□□ -1.77
SCARB2-218ENST00000639715 C6orf99Q4VX62 202 aa4□□□□□ -1.77
SCARB2-218ENST00000639715 SMIM1B2RUZ4 78 aa4□□□□□ -1.77
SCARB2-218ENST00000639715 MP68P56378 58 aa4□□□□□ -1.77
SCARB2-218ENST00000639715 ZNF575Q86XF7 245 aa4□□□□□ -1.77
SCARB2-218ENST00000639715 IGLV10-54A0A075B6I4 117 aa4□□□□□ -1.77
SCARB2-218ENST00000639715 TRAV22A0A0B4J277 110 aa4□□□□□ -1.77
SCARB2-218ENST00000639715 C1orf158Q8N1D5 194 aa4□□□□□ -1.77
SCARB2-218ENST00000639715 SETD2Q9BYW2 2564 aaPredicted RBP3.99□□□□□ -1.77
SCARB2-218ENST00000639715 SPAG11BQ08648 103 aa3.99□□□□□ -1.77
SCARB2-218ENST00000639715 HIGD2BQ4VC39 106 aa3.99□□□□□ -1.77
SCARB2-218ENST00000639715 NKAPP1Q8N9T2 125 aa3.99□□□□□ -1.77
SCARB2-218ENST00000639715 MDFIQ99750 246 aa3.99□□□□□ -1.77
SCARB2-218ENST00000639715 CXCL6P80162 114 aa3.99□□□□□ -1.77
SCARB2-218ENST00000639715 DEFB135Q30KP9 77 aa3.99□□□□□ -1.77
SCARB2-218ENST00000639715 Q8N9L7 120 aa3.99□□□□□ -1.77
SCARB2-218ENST00000639715 EYSQ5T1H1 3165 aa3.99□□□□□ -1.77
SCARB2-218ENST00000639715 CHD6Q8TD26 2715 aa3.98□□□□□ -1.77
SCARB2-218ENST00000639715 REG3AQ06141 175 aa3.98□□□□□ -1.77
SCARB2-218ENST00000639715 IGLV1-51P01701 117 aa3.98□□□□□ -1.77
SCARB2-218ENST00000639715 MUC7Q8TAX7 377 aa3.98□□□□□ -1.77
SCARB2-218ENST00000639715 CAMK2N2Q96S95 79 aa3.98□□□□□ -1.77
SCARB2-218ENST00000639715 LINC00959A0A1B0GUT2 108 aa3.98□□□□□ -1.77
SCARB2-218ENST00000639715 EPM2AB3EWF7 344 aa3.98□□□□□ -1.77
SCARB2-218ENST00000639715 M0R378 163 aa3.98□□□□□ -1.77
SCARB2-218ENST00000639715 Q6ZQY7 126 aa3.98□□□□□ -1.77
SCARB2-218ENST00000639715 Q6ZSN1 163 aa3.98□□□□□ -1.77
SCARB2-218ENST00000639715 CHCHD10Q8WYQ3 142 aaPredicted RBP3.98□□□□□ -1.77
SCARB2-218ENST00000639715 TRIOO75962 3097 aa3.97□□□□□ -1.77
SCARB2-218ENST00000639715 IGLV5-39A0A0G2JS06 123 aa3.97□□□□□ -1.77
SCARB2-218ENST00000639715 CD164L2Q6UWJ8 174 aa3.97□□□□□ -1.77
SCARB2-218ENST00000639715 C1orf64Q8NEQ6 169 aa3.97□□□□□ -1.77
SCARB2-218ENST00000639715 KLK12Q9UKR0 248 aa3.97□□□□□ -1.77
SCARB2-218ENST00000639715 ANKRD17O75179 2603 aaKnown RBP3.97□□□□□ -1.77
SCARB2-218ENST00000639715 IGLV5-45A0A087WSX0 123 aa3.97□□□□□ -1.77
SCARB2-218ENST00000639715 KRTAP10-9P60411 292 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms