RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 XAGE1AQ9HD64 81 aa9.93□□□□□ -0.82
COLCA2-207ENST00000639470 PRSS2P07478 247 aa9.92□□□□□ -0.82
COLCA2-207ENST00000639470 LINC01561Q8N1V8 128 aa9.92□□□□□ -0.82
COLCA2-207ENST00000639470 SCGB3A1Q96QR1 104 aa9.92□□□□□ -0.82
COLCA2-207ENST00000639470 TIMM17AQ99595 171 aa9.92□□□□□ -0.82
COLCA2-207ENST00000639470 SNAPINO95295 136 aa9.91□□□□□ -0.82
COLCA2-207ENST00000639470 RPS10P5Q9NQ39 176 aa9.91□□□□□ -0.82
COLCA2-207ENST00000639470 K7EMI3 77 aa9.9□□□□□ -0.82
COLCA2-207ENST00000639470 CKS1BP61024 79 aa9.9□□□□□ -0.82
COLCA2-207ENST00000639470 UBE2BP63146 152 aa9.9□□□□□ -0.82
COLCA2-207ENST00000639470 C6orf226Q5I0X4 101 aa9.9□□□□□ -0.82
COLCA2-207ENST00000639470 Q8IZM0 81 aa9.9□□□□□ -0.82
COLCA2-207ENST00000639470 GEMIN7Q9H840 131 aaKnown RBP9.9□□□□□ -0.82
COLCA2-207ENST00000639470 LRP2P98164 4655 aa9.89□□□□□ -0.83
COLCA2-207ENST00000639470 TRAV9-1A0A075B6T8 112 aa9.89□□□□□ -0.83
COLCA2-207ENST00000639470 SMIM1B2RUZ4 78 aa9.89□□□□□ -0.83
COLCA2-207ENST00000639470 NPSP0C0P6 89 aa9.89□□□□□ -0.83
COLCA2-207ENST00000639470 S100PP25815 95 aa9.89□□□□□ -0.83
COLCA2-207ENST00000639470 HERVK_113P63121 156 aa9.89□□□□□ -0.83
COLCA2-207ENST00000639470 ERASQ7Z444 233 aa9.89□□□□□ -0.83
COLCA2-207ENST00000639470 GNB1LQ9BYB4 327 aa9.89□□□□□ -0.83
COLCA2-207ENST00000639470 LINC01546A6NGU7 62 aa9.88□□□□□ -0.83
COLCA2-207ENST00000639470 MRPL18Q9H0U6 180 aaKnown RBP9.88□□□□□ -0.83
COLCA2-207ENST00000639470 H0Y9J4 135 aa9.87□□□□□ -0.83
COLCA2-207ENST00000639470 KRTAP1-4P0C5Y4 121 aa9.87□□□□□ -0.83
COLCA2-207ENST00000639470 SPINK8P0C7L1 97 aa9.87□□□□□ -0.83
COLCA2-207ENST00000639470 FABP9Q0Z7S8 132 aa9.87□□□□□ -0.83
COLCA2-207ENST00000639470 URB1-AS1Q96HZ7 61 aa9.87□□□□□ -0.83
COLCA2-207ENST00000639470 A0A096LNJ9 63 aa9.86□□□□□ -0.83
COLCA2-207ENST00000639470 DIRC1Q969H9 104 aa9.86□□□□□ -0.83
COLCA2-207ENST00000639470 CST9LQ9H4G1 147 aa9.86□□□□□ -0.83
COLCA2-207ENST00000639470 C22orf24Q9Y442 160 aa9.86□□□□□ -0.83
COLCA2-207ENST00000639470 F8VRH5 84 aa9.85□□□□□ -0.83
COLCA2-207ENST00000639470 TINCRA0A1B0GVN0 87 aa9.84□□□□□ -0.83
COLCA2-207ENST00000639470 PMCHL1Q16048 86 aa9.84□□□□□ -0.83
COLCA2-207ENST00000639470 PAPPA-AS1Q5QFB9 102 aa9.84□□□□□ -0.83
COLCA2-207ENST00000639470 FA2HQ7L5A8 372 aa9.84□□□□□ -0.83
COLCA2-207ENST00000639470 IGLV5-45A0A087WSX0 123 aa9.83□□□□□ -0.84
COLCA2-207ENST00000639470 SEC11AP67812 179 aa9.83□□□□□ -0.84
COLCA2-207ENST00000639470 COX7B2Q8TF08 81 aa9.83□□□□□ -0.84
COLCA2-207ENST00000639470 RAB5BP61020 215 aa9.82□□□□□ -0.84
COLCA2-207ENST00000639470 GAGE10A6NGK3 116 aa9.81□□□□□ -0.84
COLCA2-207ENST00000639470 SCO1O75880 301 aa9.81□□□□□ -0.84
COLCA2-207ENST00000639470 G0S2P27469 103 aa9.81□□□□□ -0.84
COLCA2-207ENST00000639470 PMVKQ15126 192 aa9.81□□□□□ -0.84
COLCA2-207ENST00000639470 COX19Q49B96 90 aa9.81□□□□□ -0.84
COLCA2-207ENST00000639470 RPL37AP8A6NKH3 93 aa9.8□□□□□ -0.84
COLCA2-207ENST00000639470 PDZD11Q5EBL8 140 aa9.8□□□□□ -0.84
COLCA2-207ENST00000639470 C18orf32Q8TCD1 76 aa9.8□□□□□ -0.84
COLCA2-207ENST00000639470 SMCO4Q9NRQ5 59 aa9.8□□□□□ -0.84
COLCA2-207ENST00000639470 NDUFA6P56556 154 aa9.79□□□□□ -0.84
COLCA2-207ENST00000639470 MRPL55Q7Z7F7 128 aaKnown RBP9.78□□□□□ -0.84
COLCA2-207ENST00000639470 ZNF22P17026 224 aaPredicted RBP9.77□□□□□ -0.85
COLCA2-207ENST00000639470 CXCL5P42830 114 aa9.77□□□□□ -0.85
COLCA2-207ENST00000639470 LINC00167Q96N53 147 aa9.77□□□□□ -0.85
COLCA2-207ENST00000639470 YPEL4Q96NS1 127 aa9.77□□□□□ -0.85
COLCA2-207ENST00000639470 TRAPPC1Q9Y5R8 145 aa9.77□□□□□ -0.85
COLCA2-207ENST00000639470 ZNF861PO60384 105 aa9.76□□□□□ -0.85
COLCA2-207ENST00000639470 IGLC3P0DOY3 106 aa9.76□□□□□ -0.85
COLCA2-207ENST00000639470 CBLN2Q8IUK8 224 aa9.76□□□□□ -0.85
COLCA2-207ENST00000639470 IGLV5-39A0A0G2JS06 123 aa9.74□□□□□ -0.85
COLCA2-207ENST00000639470 LINC00614P0C842 121 aa9.74□□□□□ -0.85
COLCA2-207ENST00000639470 PFN2P35080 140 aa9.74□□□□□ -0.85
COLCA2-207ENST00000639470 LBHQ53QV2 105 aaPredicted RBP9.74□□□□□ -0.85
COLCA2-207ENST00000639470 Q8NDZ9 215 aa9.74□□□□□ -0.85
COLCA2-207ENST00000639470 ZNF625Q96I27 306 aaPredicted RBP9.74□□□□□ -0.85
COLCA2-207ENST00000639470 ANAPC11Q9NYG5 84 aa9.74□□□□□ -0.85
COLCA2-207ENST00000639470 LPAP08519 4548 aa9.74□□□□□ -0.85
COLCA2-207ENST00000639470 IGLV1-50A0A075B6I6 118 aa9.73□□□□□ -0.85
COLCA2-207ENST00000639470 C11orf86A6NJI1 115 aa9.73□□□□□ -0.85
COLCA2-207ENST00000639470 TP73-AS1Q9UF72 201 aa9.73□□□□□ -0.85
COLCA2-207ENST00000639470 RNF213Q63HN8 5207 aa9.72□□□□□ -0.85
COLCA2-207ENST00000639470 A0A087X002 238 aa9.72□□□□□ -0.85
COLCA2-207ENST00000639470 BCE1O60756 84 aa9.72□□□□□ -0.85
COLCA2-207ENST00000639470 HBDP02042 147 aa9.72□□□□□ -0.85
COLCA2-207ENST00000639470 LINC01549A6NIU2 74 aa9.71□□□□□ -0.86
COLCA2-207ENST00000639470 NUPR1O60356 82 aa9.71□□□□□ -0.86
COLCA2-207ENST00000639470 IGKV2-28A0A075B6P5 120 aa9.7□□□□□ -0.86
COLCA2-207ENST00000639470 H3BRM9 83 aa9.7□□□□□ -0.86
COLCA2-207ENST00000639470 IGKV2D-28P01615 120 aa9.7□□□□□ -0.86
COLCA2-207ENST00000639470 BAGE3Q86Y29 109 aa9.7□□□□□ -0.86
COLCA2-207ENST00000639470 IGLV5-37A0A075B6J1 123 aa9.69□□□□□ -0.86
COLCA2-207ENST00000639470 ATP5LO75964 103 aa9.69□□□□□ -0.86
COLCA2-207ENST00000639470 ATP6V1G1O75348 118 aa9.68□□□□□ -0.86
COLCA2-207ENST00000639470 S100A1P23297 94 aa9.68□□□□□ -0.86
COLCA2-207ENST00000639470 SND1-IT1Q9HBX3 110 aa9.68□□□□□ -0.86
COLCA2-207ENST00000639470 TMEM238C9JI98 176 aa9.67□□□□□ -0.86
COLCA2-207ENST00000639470 TSPAN13O95857 204 aa9.67□□□□□ -0.86
COLCA2-207ENST00000639470 VPREB1P12018 145 aa9.67□□□□□ -0.86
COLCA2-207ENST00000639470 TMEM170BQ5T4T1 132 aa9.67□□□□□ -0.86
COLCA2-207ENST00000639470 KRTAP13-1Q8IUC0 172 aa9.67□□□□□ -0.86
COLCA2-207ENST00000639470 NKAPP1Q8N9T2 125 aa9.67□□□□□ -0.86
COLCA2-207ENST00000639470 ERG28Q9UKR5 140 aa9.67□□□□□ -0.86
COLCA2-207ENST00000639470 RPL28P46779 137 aaKnown RBP9.66□□□□□ -0.86
COLCA2-207ENST00000639470 A0A0U1RRA0 63 aa9.65□□□□□ -0.86
COLCA2-207ENST00000639470 COLCA2A8K830 154 aa9.65□□□□□ -0.86
COLCA2-207ENST00000639470 PRLHP81277 87 aa9.65□□□□□ -0.86
COLCA2-207ENST00000639470 RPL13AP40429 203 aaKnown RBP9.64□□□□□ -0.87
COLCA2-207ENST00000639470 PRR4Q16378 134 aa9.64□□□□□ -0.87
COLCA2-207ENST00000639470 KRTAP13-2Q52LG2 175 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms