RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 KRTAP13-2Q52LG2 175 aa9.1□□□□□ -0.95
PDLIM3-213ENST00000629667 LINC00304Q8N9R0 145 aa9.1□□□□□ -0.95
PDLIM3-213ENST00000629667 LOC389332A0A1B0GUA5 103 aa9.09□□□□□ -0.95
PDLIM3-213ENST00000629667 F8VRH5 84 aa9.09□□□□□ -0.95
PDLIM3-213ENST00000629667 LINC00173Q6ZV60 143 aa9.09□□□□□ -0.95
PDLIM3-213ENST00000629667 LINC00167Q96N53 147 aa9.09□□□□□ -0.95
PDLIM3-213ENST00000629667 AMELXQ99217 191 aa9.09□□□□□ -0.95
PDLIM3-213ENST00000629667 CYSLTR1Q9Y271 337 aa9.09□□□□□ -0.95
PDLIM3-213ENST00000629667 IGLV7-46A0A075B6I9 117 aa9.08□□□□□ -0.96
PDLIM3-213ENST00000629667 C2orf66Q6UXQ4 117 aa9.08□□□□□ -0.96
PDLIM3-213ENST00000629667 UBE2AP49459 152 aa9.07□□□□□ -0.96
PDLIM3-213ENST00000629667 FAM229BQ4G0N7 80 aa9.07□□□□□ -0.96
PDLIM3-213ENST00000629667 MAP1LC3AQ9H492 121 aa9.07□□□□□ -0.96
PDLIM3-213ENST00000629667 GAGE10A6NGK3 116 aa9.06□□□□□ -0.96
PDLIM3-213ENST00000629667 PRSS47A8MTI9 375 aa9.06□□□□□ -0.96
PDLIM3-213ENST00000629667 HERVK_113P63121 156 aa9.06□□□□□ -0.96
PDLIM3-213ENST00000629667 FAM19A3Q7Z5A8 133 aa9.06□□□□□ -0.96
PDLIM3-213ENST00000629667 AKAP14Q86UN6 197 aa9.06□□□□□ -0.96
PDLIM3-213ENST00000629667 CDKN2A-AS1Q9UH64 79 aa9.06□□□□□ -0.96
PDLIM3-213ENST00000629667 IGKV2D-26A0A0A0MRZ7 120 aa9.05□□□□□ -0.96
PDLIM3-213ENST00000629667 CXCL5P42830 114 aa9.05□□□□□ -0.96
PDLIM3-213ENST00000629667 SEC11AP67812 179 aa9.05□□□□□ -0.96
PDLIM3-213ENST00000629667 LAMTOR2Q9Y2Q5 125 aa9.05□□□□□ -0.96
PDLIM3-213ENST00000629667 C9JQL5 133 aa9.04□□□□□ -0.96
PDLIM3-213ENST00000629667 NPSP0C0P6 89 aa9.04□□□□□ -0.96
PDLIM3-213ENST00000629667 ATP5L2Q7Z4Y8 100 aa9.04□□□□□ -0.96
PDLIM3-213ENST00000629667 KRTAP13-1Q8IUC0 172 aa9.04□□□□□ -0.96
PDLIM3-213ENST00000629667 Q8N8P6 123 aa9.04□□□□□ -0.96
PDLIM3-213ENST00000629667 GEMIN7Q9H840 131 aaKnown RBP9.04□□□□□ -0.96
PDLIM3-213ENST00000629667 ORMDL2Q53FV1 153 aa9.03□□□□□ -0.96
PDLIM3-213ENST00000629667 IGIPA6NJ69 53 aa9.02□□□□□ -0.97
PDLIM3-213ENST00000629667 CTAG1AP78358 180 aa9.02□□□□□ -0.97
PDLIM3-213ENST00000629667 PNRC1Q12796 327 aaPredicted RBP9.02□□□□□ -0.97
PDLIM3-213ENST00000629667 PAPPA-AS1Q5QFB9 102 aa9.02□□□□□ -0.97
PDLIM3-213ENST00000629667 LCE2DQ5TA82 110 aaPredicted RBP9.02□□□□□ -0.97
PDLIM3-213ENST00000629667 NKAPP1Q8N9T2 125 aa9.02□□□□□ -0.97
PDLIM3-213ENST00000629667 PEA15Q15121 130 aa9.01□□□□□ -0.97
PDLIM3-213ENST00000629667 PPDPFQ9H3Y8 114 aa9.01□□□□□ -0.97
PDLIM3-213ENST00000629667 IGLV5-37A0A075B6J1 123 aa9□□□□□ -0.97
PDLIM3-213ENST00000629667 SRSF3P84103 164 aaKnown RBP9□□□□□ -0.97
PDLIM3-213ENST00000629667 IGKV2-28A0A075B6P5 120 aa8.99□□□□□ -0.97
PDLIM3-213ENST00000629667 K7EMI3 77 aa8.99□□□□□ -0.97
PDLIM3-213ENST00000629667 IGKV2D-28P01615 120 aa8.99□□□□□ -0.97
PDLIM3-213ENST00000629667 RAB5BP61020 215 aa8.99□□□□□ -0.97
PDLIM3-213ENST00000629667 SMIM1B2RUZ4 78 aa8.98□□□□□ -0.97
PDLIM3-213ENST00000629667 PRLHP81277 87 aa8.98□□□□□ -0.97
PDLIM3-213ENST00000629667 COX7B2Q8TF08 81 aa8.98□□□□□ -0.97
PDLIM3-213ENST00000629667 G0S2P27469 103 aa8.97□□□□□ -0.97
PDLIM3-213ENST00000629667 PDZD11Q5EBL8 140 aa8.97□□□□□ -0.97
PDLIM3-213ENST00000629667 FAM19A1Q7Z5A9 133 aa8.96□□□□□ -0.98
PDLIM3-213ENST00000629667 TIMM17AQ99595 171 aa8.96□□□□□ -0.98
PDLIM3-213ENST00000629667 NXT2Q9NPJ8 142 aaKnown RBP8.96□□□□□ -0.98
PDLIM3-213ENST00000629667 SCO1O75880 301 aa8.95□□□□□ -0.98
PDLIM3-213ENST00000629667 LINC01547P58512 204 aaPredicted RBP8.95□□□□□ -0.98
PDLIM3-213ENST00000629667 LINC00337Q8N6G1 96 aa8.94□□□□□ -0.98
PDLIM3-213ENST00000629667 TINCRA0A1B0GVN0 87 aa8.93□□□□□ -0.98
PDLIM3-213ENST00000629667 SPAG11AQ6PDA7 123 aa8.93□□□□□ -0.98
PDLIM3-213ENST00000629667 C3orf22Q8N5N4 141 aa8.93□□□□□ -0.98
PDLIM3-213ENST00000629667 TOMM6Q96B49 74 aa8.93□□□□□ -0.98
PDLIM3-213ENST00000629667 FP248Q71RG6 208 aaPredicted RBP8.92□□□□□ -0.98
PDLIM3-213ENST00000629667 ERASQ7Z444 233 aa8.92□□□□□ -0.98
PDLIM3-213ENST00000629667 PLEKHB2Q96CS7 222 aa8.92□□□□□ -0.98
PDLIM3-213ENST00000629667 SCGB3A1Q96QR1 104 aa8.92□□□□□ -0.98
PDLIM3-213ENST00000629667 TMEM126AQ9H061 195 aa8.92□□□□□ -0.98
PDLIM3-213ENST00000629667 IGLV5-45A0A087WSX0 123 aa8.91□□□□□ -0.98
PDLIM3-213ENST00000629667 TMEM238C9JI98 176 aa8.91□□□□□ -0.98
PDLIM3-213ENST00000629667 ATP5LO75964 103 aa8.91□□□□□ -0.98
PDLIM3-213ENST00000629667 SPINK8P0C7L1 97 aa8.91□□□□□ -0.98
PDLIM3-213ENST00000629667 PFN2P35080 140 aa8.9□□□□□ -0.98
PDLIM3-213ENST00000629667 C4orf48Q5BLP8 95 aa8.9□□□□□ -0.98
PDLIM3-213ENST00000629667 CBLN2Q8IUK8 224 aa8.9□□□□□ -0.98
PDLIM3-213ENST00000629667 FSIP2Q5CZC0 6907 aa8.9□□□□□ -0.98
PDLIM3-213ENST00000629667 ASB16-AS1Q495Z4 193 aa8.89□□□□□ -0.99
PDLIM3-213ENST00000629667 GNB1LQ9BYB4 327 aa8.89□□□□□ -0.99
PDLIM3-213ENST00000629667 M0R378 163 aa8.88□□□□□ -0.99
PDLIM3-213ENST00000629667 VPREB1P12018 145 aa8.88□□□□□ -0.99
PDLIM3-213ENST00000629667 ADCYAP1P18509 176 aa8.88□□□□□ -0.99
PDLIM3-213ENST00000629667 RPL24P83731 157 aaKnown RBP8.88□□□□□ -0.99
PDLIM3-213ENST00000629667 HIGD2AQ9BW72 106 aa8.88□□□□□ -0.99
PDLIM3-213ENST00000629667 KRTAP13-3Q3SY46 172 aa8.87□□□□□ -0.99
PDLIM3-213ENST00000629667 ANAPC16Q96DE5 110 aa8.87□□□□□ -0.99
PDLIM3-213ENST00000629667 MRPL18Q9H0U6 180 aaKnown RBP8.87□□□□□ -0.99
PDLIM3-213ENST00000629667 H3BRM9 83 aa8.86□□□□□ -0.99
PDLIM3-213ENST00000629667 MT-ND4LP03901 98 aa8.86□□□□□ -0.99
PDLIM3-213ENST00000629667 CST9LQ9H4G1 147 aa8.86□□□□□ -0.99
PDLIM3-213ENST00000629667 SND1-IT1Q9HBX3 110 aa8.86□□□□□ -0.99
PDLIM3-213ENST00000629667 CRCT1Q9UGL9 99 aa8.86□□□□□ -0.99
PDLIM3-213ENST00000629667 LINC01549A6NIU2 74 aa8.84□□□□□ -0.99
PDLIM3-213ENST00000629667 SEC61BP60468 96 aaKnown RBP8.84□□□□□ -0.99
PDLIM3-213ENST00000629667 RAB14P61106 215 aa8.84□□□□□ -0.99
PDLIM3-213ENST00000629667 PMVKQ15126 192 aa8.84□□□□□ -0.99
PDLIM3-213ENST00000629667 SPRR4Q96PI1 79 aa8.84□□□□□ -0.99
PDLIM3-213ENST00000629667 ERG28Q9UKR5 140 aa8.84□□□□□ -0.99
PDLIM3-213ENST00000629667 KIAA1644Q3SXP7 199 aa8.83□□□□□ -1
PDLIM3-213ENST00000629667 KRTAP4-1Q9BYQ7 146 aa8.83□□□□□ -1
PDLIM3-213ENST00000629667 COX17Q14061 63 aa8.82□□□□□ -1
PDLIM3-213ENST00000629667 DAND5Q8N907 189 aa8.82□□□□□ -1
PDLIM3-213ENST00000629667 Q8NBF4 154 aa8.82□□□□□ -1
PDLIM3-213ENST00000629667 ZNF706Q9Y5V0 76 aaPredicted RBP8.82□□□□□ -1
PDLIM3-213ENST00000629667 SPINK1P00995 79 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms