RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 MAPKAPK5-AS1Q8N8E1 139 aa9.64□□□□□ -0.87
SYNGAP1-208ENST00000629380 CYSRT1A8MQ03 144 aa9.63□□□□□ -0.87
SYNGAP1-208ENST00000629380 Q6ZSV7 163 aa9.63□□□□□ -0.87
SYNGAP1-208ENST00000629380 YPEL4Q96NS1 127 aa9.63□□□□□ -0.87
SYNGAP1-208ENST00000629380 MAST4O15021 2626 aa9.63□□□□□ -0.87
SYNGAP1-208ENST00000629380 LINC00526Q96FQ7 95 aa9.62□□□□□ -0.87
SYNGAP1-208ENST00000629380 HCG22E2RYF7 251 aa9.62□□□□□ -0.87
SYNGAP1-208ENST00000629380 Q9BRP9 147 aa9.62□□□□□ -0.87
SYNGAP1-208ENST00000629380 C2orf91Q6ZV80 131 aa9.62□□□□□ -0.87
SYNGAP1-208ENST00000629380 LINC01547P58512 204 aaPredicted RBP9.62□□□□□ -0.87
SYNGAP1-208ENST00000629380 CR1P17927 2039 aa9.62□□□□□ -0.87
SYNGAP1-208ENST00000629380 NANOS2P60321 138 aaKnown RBP9.61□□□□□ -0.87
SYNGAP1-208ENST00000629380 LINC00482Q8N8I6 264 aa9.61□□□□□ -0.87
SYNGAP1-208ENST00000629380 RNASE3P12724 160 aaKnown RBP9.61□□□□□ -0.87
SYNGAP1-208ENST00000629380 hDV103S1A0JD37 113 aa9.6□□□□□ -0.87
SYNGAP1-208ENST00000629380 CXCL6P80162 114 aa9.6□□□□□ -0.87
SYNGAP1-208ENST00000629380 TRBV7-7A0A0K0K1E9 115 aa9.6□□□□□ -0.87
SYNGAP1-208ENST00000629380 PSPHP1O15172 72 aa9.6□□□□□ -0.87
SYNGAP1-208ENST00000629380 CRYGAP11844 174 aa9.6□□□□□ -0.87
SYNGAP1-208ENST00000629380 VPREB1P12018 145 aa9.6□□□□□ -0.87
SYNGAP1-208ENST00000629380 TRBV10-3A0A0K0K1G6 114 aa9.59□□□□□ -0.87
SYNGAP1-208ENST00000629380 ZNF702PQ9H963 129 aa9.58□□□□□ -0.88
SYNGAP1-208ENST00000629380 CDC42SE2Q9NRR3 84 aa9.58□□□□□ -0.88
SYNGAP1-208ENST00000629380 LINC00337Q8N6G1 96 aa9.58□□□□□ -0.88
SYNGAP1-208ENST00000629380 TP53AIP1Q9HCN2 124 aa9.58□□□□□ -0.88
SYNGAP1-208ENST00000629380 ATRQ13535 2644 aa9.58□□□□□ -0.88
SYNGAP1-208ENST00000629380 SERTAD4-AS1Q5TG53 156 aa9.58□□□□□ -0.88
SYNGAP1-208ENST00000629380 XGP55808 180 aa9.57□□□□□ -0.88
SYNGAP1-208ENST00000629380 CRIP1P50238 77 aa9.57□□□□□ -0.88
SYNGAP1-208ENST00000629380 POM121L12Q8N7R1 296 aa9.57□□□□□ -0.88
SYNGAP1-208ENST00000629380 MSMPQ1L6U9 139 aa9.57□□□□□ -0.88
SYNGAP1-208ENST00000629380 PROK1P58294 105 aa9.57□□□□□ -0.88
SYNGAP1-208ENST00000629380 A8MZ25 164 aa9.56□□□□□ -0.88
SYNGAP1-208ENST00000629380 C2orf48Q96LS8 159 aa9.56□□□□□ -0.88
SYNGAP1-208ENST00000629380 SPINK1P00995 79 aa9.56□□□□□ -0.88
SYNGAP1-208ENST00000629380 SBSPONQ8IVN8 264 aa9.56□□□□□ -0.88
SYNGAP1-208ENST00000629380 C7orf65Q6ZTY9 151 aa9.55□□□□□ -0.88
SYNGAP1-208ENST00000629380 Q8N3U1 123 aa9.55□□□□□ -0.88
SYNGAP1-208ENST00000629380 POLR2KP53803 58 aaKnown RBP9.55□□□□□ -0.88
SYNGAP1-208ENST00000629380 IGLV1-40P01703 118 aa9.54□□□□□ -0.88
SYNGAP1-208ENST00000629380 LINC01006Q8NI28 216 aa9.54□□□□□ -0.88
SYNGAP1-208ENST00000629380 LINC01556Q5JQF7 62 aa9.54□□□□□ -0.88
SYNGAP1-208ENST00000629380 Q8N2B8 174 aa9.54□□□□□ -0.88
SYNGAP1-208ENST00000629380 SOSTDC1Q6X4U4 206 aa9.54□□□□□ -0.88
SYNGAP1-208ENST00000629380 TMEM254Q8TBM7 123 aa9.53□□□□□ -0.88
SYNGAP1-208ENST00000629380 LINC01561Q8N1V8 128 aa9.52□□□□□ -0.89
SYNGAP1-208ENST00000629380 SPAG11AQ6PDA7 123 aa9.52□□□□□ -0.89
SYNGAP1-208ENST00000629380 LINC00575Q6W349 94 aa9.52□□□□□ -0.89
SYNGAP1-208ENST00000629380 RETNLBQ9BQ08 111 aa9.52□□□□□ -0.89
SYNGAP1-208ENST00000629380 PRR9Q5T870 116 aa9.51□□□□□ -0.89
SYNGAP1-208ENST00000629380 A0A1B0GUV1 79 aa9.51□□□□□ -0.89
SYNGAP1-208ENST00000629380 Q8N6K4 173 aa9.51□□□□□ -0.89
SYNGAP1-208ENST00000629380 ZNF580Q9UK33 172 aa9.51□□□□□ -0.89
SYNGAP1-208ENST00000629380 WISP2O76076 250 aa9.51□□□□□ -0.89
SYNGAP1-208ENST00000629380 C1orf64Q8NEQ6 169 aa9.51□□□□□ -0.89
SYNGAP1-208ENST00000629380 A0A087WYN8 130 aa9.5□□□□□ -0.89
SYNGAP1-208ENST00000629380 UNQ6190/PRO20217Q6UXQ8 127 aa9.5□□□□□ -0.89
SYNGAP1-208ENST00000629380 IGIPA6NJ69 53 aa9.5□□□□□ -0.89
SYNGAP1-208ENST00000629380 BEAN1Q3B7T3 259 aa9.5□□□□□ -0.89
SYNGAP1-208ENST00000629380 Q6ZS46 218 aa9.5□□□□□ -0.89
SYNGAP1-208ENST00000629380 SMIM1B2RUZ4 78 aa9.5□□□□□ -0.89
SYNGAP1-208ENST00000629380 ZNF295-AS1Q8N0V1 137 aa9.49□□□□□ -0.89
SYNGAP1-208ENST00000629380 PCOTHQ58A44 107 aa9.49□□□□□ -0.89
SYNGAP1-208ENST00000629380 LINC00242Q5T6M2 205 aa9.49□□□□□ -0.89
SYNGAP1-208ENST00000629380 AKAP13Q12802 2813 aa9.49□□□□□ -0.89
SYNGAP1-208ENST00000629380 ACYP2P14621 99 aa9.49□□□□□ -0.89
SYNGAP1-208ENST00000629380 C9orf116Q5BN46 136 aaPredicted RBP9.49□□□□□ -0.89
SYNGAP1-208ENST00000629380 IGKV2D-30A0A075B6S6 120 aa9.48□□□□□ -0.89
SYNGAP1-208ENST00000629380 IGKV2-30P06310 120 aa9.48□□□□□ -0.89
SYNGAP1-208ENST00000629380 BRWD1-AS2P59051 145 aa9.48□□□□□ -0.89
SYNGAP1-208ENST00000629380 C1orf134Q5TEV5 83 aa9.48□□□□□ -0.89
SYNGAP1-208ENST00000629380 C6orf223Q8N319 242 aa9.48□□□□□ -0.89
SYNGAP1-208ENST00000629380 A0A1B0GU69 56 aa9.48□□□□□ -0.89
SYNGAP1-208ENST00000629380 A0A1B0GW54 56 aa9.48□□□□□ -0.89
SYNGAP1-208ENST00000629380 MGAM2Q2M2H8 2515 aa9.47□□□□□ -0.89
SYNGAP1-208ENST00000629380 PRLHP81277 87 aa9.47□□□□□ -0.89
SYNGAP1-208ENST00000629380 Q6ZTC4 211 aa9.46□□□□□ -0.9
SYNGAP1-208ENST00000629380 CENPEQ02224 2701 aa9.46□□□□□ -0.9
SYNGAP1-208ENST00000629380 A0A087WSZ3 146 aa9.46□□□□□ -0.9
SYNGAP1-208ENST00000629380 C16orf95Q9H693 158 aa9.45□□□□□ -0.9
SYNGAP1-208ENST00000629380 PRO0628Q9UI54 55 aa9.45□□□□□ -0.9
SYNGAP1-208ENST00000629380 NHLRC4P0CG21 123 aaPredicted RBP9.45□□□□□ -0.9
SYNGAP1-208ENST00000629380 C10orf99Q6UWK7 81 aa9.44□□□□□ -0.9
SYNGAP1-208ENST00000629380 BRI3O95415 125 aa9.44□□□□□ -0.9
SYNGAP1-208ENST00000629380 C6orf48Q9UBA6 75 aa9.44□□□□□ -0.9
SYNGAP1-208ENST00000629380 C10orf142B7Z368 130 aa9.44□□□□□ -0.9
SYNGAP1-208ENST00000629380 AMELXQ99217 191 aa9.44□□□□□ -0.9
SYNGAP1-208ENST00000629380 CFAP46Q8IYW2 2715 aa9.44□□□□□ -0.9
SYNGAP1-208ENST00000629380 PLA2G1BP04054 148 aaKnown RBP9.42□□□□□ -0.9
SYNGAP1-208ENST00000629380 FLNBO75369 2602 aaKnown RBP9.42□□□□□ -0.9
SYNGAP1-208ENST00000629380 C8orf87E5RJ46 101 aa9.41□□□□□ -0.9
SYNGAP1-208ENST00000629380 C11orf21Q9P2W6 132 aa9.41□□□□□ -0.9
SYNGAP1-208ENST00000629380 C1orf229Q6ZS94 237 aaPredicted RBP9.4□□□□□ -0.9
SYNGAP1-208ENST00000629380 IGLV1-51P01701 117 aa9.4□□□□□ -0.9
SYNGAP1-208ENST00000629380 H3BPC8 53 aa9.4□□□□□ -0.91
SYNGAP1-208ENST00000629380 COX6A2Q02221 97 aa9.39□□□□□ -0.91
SYNGAP1-208ENST00000629380 C18orf65Q6ZTR6 163 aa9.39□□□□□ -0.91
SYNGAP1-208ENST00000629380 A0A087WVE0 104 aa9.39□□□□□ -0.91
SYNGAP1-208ENST00000629380 PRR3P79522 188 aaKnown RBP9.39□□□□□ -0.91
SYNGAP1-208ENST00000629380 TRAV22A0A0B4J277 110 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms