RNA–Protein interactions for RNA: ENST00000622565.4

LTBP4-239, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-239ENST00000622565 Q8IZM0 81 aa11.75□□□□□ -0.53
LTBP4-239ENST00000622565 SCGB3A1Q96QR1 104 aa11.75□□□□□ -0.53
LTBP4-239ENST00000622565 M0QXV9 152 aa11.74□□□□□ -0.53
LTBP4-239ENST00000622565 PRSS2P07478 247 aa11.74□□□□□ -0.53
LTBP4-239ENST00000622565 G0S2P27469 103 aa11.74□□□□□ -0.53
LTBP4-239ENST00000622565 C6orf226Q5I0X4 101 aa11.74□□□□□ -0.53
LTBP4-239ENST00000622565 PAPPA-AS1Q5QFB9 102 aa11.74□□□□□ -0.53
LTBP4-239ENST00000622565 LINC00469Q8N7U9 141 aa11.74□□□□□ -0.53
LTBP4-239ENST00000622565 CKS1BP61024 79 aa11.73□□□□□ -0.53
LTBP4-239ENST00000622565 GEMIN7Q9H840 131 aaKnown RBP11.73□□□□□ -0.53
LTBP4-239ENST00000622565 SEC11AP67812 179 aa11.72□□□□□ -0.53
LTBP4-239ENST00000622565 MRPL18Q9H0U6 180 aaKnown RBP11.72□□□□□ -0.53
LTBP4-239ENST00000622565 CARHSP1Q9Y2V2 147 aaKnown RBP11.72□□□□□ -0.53
LTBP4-239ENST00000622565 SMIM1B2RUZ4 78 aa11.71□□□□□ -0.53
LTBP4-239ENST00000622565 RPS10P5Q9NQ39 176 aa11.71□□□□□ -0.53
LTBP4-239ENST00000622565 FABP9Q0Z7S8 132 aa11.7□□□□□ -0.54
LTBP4-239ENST00000622565 CST9LQ9H4G1 147 aa11.7□□□□□ -0.54
LTBP4-239ENST00000622565 XAGE1AQ9HD64 81 aa11.7□□□□□ -0.54
LTBP4-239ENST00000622565 IGLV5-45A0A087WSX0 123 aa11.69□□□□□ -0.54
LTBP4-239ENST00000622565 TINCRA0A1B0GVN0 87 aa11.69□□□□□ -0.54
LTBP4-239ENST00000622565 RHEBQ15382 184 aa11.69□□□□□ -0.54
LTBP4-239ENST00000622565 LRP2P98164 4655 aa11.69□□□□□ -0.54
LTBP4-239ENST00000622565 F8VRH5 84 aa11.68□□□□□ -0.54
LTBP4-239ENST00000622565 UBE2BP63146 152 aa11.68□□□□□ -0.54
LTBP4-239ENST00000622565 COX19Q49B96 90 aa11.68□□□□□ -0.54
LTBP4-239ENST00000622565 URB1-AS1Q96HZ7 61 aa11.68□□□□□ -0.54
LTBP4-239ENST00000622565 A0A096LNJ9 63 aa11.67□□□□□ -0.54
LTBP4-239ENST00000622565 H0Y9J4 135 aa11.67□□□□□ -0.54
LTBP4-239ENST00000622565 FA2HQ7L5A8 372 aa11.67□□□□□ -0.54
LTBP4-239ENST00000622565 DIRC1Q969H9 104 aa11.67□□□□□ -0.54
LTBP4-239ENST00000622565 PRR26Q8N8Z3 221 aa11.66□□□□□ -0.54
LTBP4-239ENST00000622565 C22orf24Q9Y442 160 aa11.66□□□□□ -0.54
LTBP4-239ENST00000622565 SPINK8P0C7L1 97 aa11.65□□□□□ -0.54
LTBP4-239ENST00000622565 PMVKQ15126 192 aa11.65□□□□□ -0.54
LTBP4-239ENST00000622565 PDZD11Q5EBL8 140 aa11.65□□□□□ -0.54
LTBP4-239ENST00000622565 COX7B2Q8TF08 81 aa11.65□□□□□ -0.54
LTBP4-239ENST00000622565 LINC01549A6NIU2 74 aa11.64□□□□□ -0.55
LTBP4-239ENST00000622565 KRTAP1-4P0C5Y4 121 aa11.64□□□□□ -0.55
LTBP4-239ENST00000622565 SMCO4Q9NRQ5 59 aa11.64□□□□□ -0.55
LTBP4-239ENST00000622565 CXCL5P42830 114 aa11.63□□□□□ -0.55
LTBP4-239ENST00000622565 C18orf32Q8TCD1 76 aa11.63□□□□□ -0.55
LTBP4-239ENST00000622565 TRAPPC1Q9Y5R8 145 aa11.61□□□□□ -0.55
LTBP4-239ENST00000622565 PMCHL1Q16048 86 aa11.6□□□□□ -0.55
LTBP4-239ENST00000622565 APOC3P02656 99 aa11.59□□□□□ -0.55
LTBP4-239ENST00000622565 IGLC3P0DOY3 106 aa11.59□□□□□ -0.55
LTBP4-239ENST00000622565 LINC00614P0C842 121 aa11.58□□□□□ -0.56
LTBP4-239ENST00000622565 RAB5BP61020 215 aa11.58□□□□□ -0.56
LTBP4-239ENST00000622565 MRPL55Q7Z7F7 128 aaKnown RBP11.57□□□□□ -0.56
LTBP4-239ENST00000622565 IGLV5-39A0A0G2JS06 123 aa11.56□□□□□ -0.56
LTBP4-239ENST00000622565 ZNF861PO60384 105 aa11.56□□□□□ -0.56
LTBP4-239ENST00000622565 ZNF22P17026 224 aaPredicted RBP11.56□□□□□ -0.56
LTBP4-239ENST00000622565 NDUFA6P56556 154 aa11.56□□□□□ -0.56
LTBP4-239ENST00000622565 LBHQ53QV2 105 aaPredicted RBP11.56□□□□□ -0.56
LTBP4-239ENST00000622565 TP73-AS1Q9UF72 201 aa11.56□□□□□ -0.56
LTBP4-239ENST00000622565 HBDP02042 147 aa11.55□□□□□ -0.56
LTBP4-239ENST00000622565 LINC00167Q96N53 147 aa11.55□□□□□ -0.56
LTBP4-239ENST00000622565 H3BRM9 83 aa11.54□□□□□ -0.56
LTBP4-239ENST00000622565 NUPR1O60356 82 aa11.54□□□□□ -0.56
LTBP4-239ENST00000622565 YPEL4Q96NS1 127 aa11.54□□□□□ -0.56
LTBP4-239ENST00000622565 IGLV1-50A0A075B6I6 118 aa11.53□□□□□ -0.56
LTBP4-239ENST00000622565 RPL37AP8A6NKH3 93 aa11.53□□□□□ -0.56
LTBP4-239ENST00000622565 RNF213Q63HN8 5207 aa11.53□□□□□ -0.56
LTBP4-239ENST00000622565 LPAP08519 4548 aa11.52□□□□□ -0.56
LTBP4-239ENST00000622565 GAGE10A6NGK3 116 aa11.52□□□□□ -0.57
LTBP4-239ENST00000622565 SNAPINO95295 136 aa11.52□□□□□ -0.57
LTBP4-239ENST00000622565 NDUFA5Q16718 116 aa11.52□□□□□ -0.57
LTBP4-239ENST00000622565 IGLV5-37A0A075B6J1 123 aa11.51□□□□□ -0.57
LTBP4-239ENST00000622565 C11orf86A6NJI1 115 aa11.51□□□□□ -0.57
LTBP4-239ENST00000622565 SCO1O75880 301 aa11.51□□□□□ -0.57
LTBP4-239ENST00000622565 SVBPQ8N300 66 aa11.51□□□□□ -0.57
LTBP4-239ENST00000622565 BCE1O60756 84 aa11.5□□□□□ -0.57
LTBP4-239ENST00000622565 ATP5LO75964 103 aa11.5□□□□□ -0.57
LTBP4-239ENST00000622565 PFN2P35080 140 aa11.49□□□□□ -0.57
LTBP4-239ENST00000622565 BAGE3Q86Y29 109 aa11.49□□□□□ -0.57
LTBP4-239ENST00000622565 ZNF625Q96I27 306 aaPredicted RBP11.47□□□□□ -0.57
LTBP4-239ENST00000622565 Q8NDZ9 215 aa11.46□□□□□ -0.57
LTBP4-239ENST00000622565 ERG28Q9UKR5 140 aa11.46□□□□□ -0.57
LTBP4-239ENST00000622565 RPL28P46779 137 aaKnown RBP11.45□□□□□ -0.58
LTBP4-239ENST00000622565 TMEM170BQ5T4T1 132 aa11.45□□□□□ -0.58
LTBP4-239ENST00000622565 KRTAP13-1Q8IUC0 172 aa11.45□□□□□ -0.58
LTBP4-239ENST00000622565 NKAPP1Q8N9T2 125 aa11.45□□□□□ -0.58
LTBP4-239ENST00000622565 SND1-IT1Q9HBX3 110 aa11.45□□□□□ -0.58
LTBP4-239ENST00000622565 A0A087X002 238 aa11.44□□□□□ -0.58
LTBP4-239ENST00000622565 VPREB1P12018 145 aa11.44□□□□□ -0.58
LTBP4-239ENST00000622565 IGKV2-28A0A075B6P5 120 aa11.43□□□□□ -0.58
LTBP4-239ENST00000622565 IGKV2D-28P01615 120 aa11.43□□□□□ -0.58
LTBP4-239ENST00000622565 RPL13AP40429 203 aaKnown RBP11.43□□□□□ -0.58
LTBP4-239ENST00000622565 SLC7A5P1Q8MH63 180 aa11.43□□□□□ -0.58
LTBP4-239ENST00000622565 CHTOPQ9Y3Y2 248 aaKnown RBP11.43□□□□□ -0.58
LTBP4-239ENST00000622565 CBLN2Q8IUK8 224 aa11.42□□□□□ -0.58
LTBP4-239ENST00000622565 CHCHD1Q96BP2 118 aaKnown RBP11.41□□□□□ -0.58
LTBP4-239ENST00000622565 ANAPC11Q9NYG5 84 aa11.41□□□□□ -0.58
LTBP4-239ENST00000622565 COX17Q14061 63 aa11.4□□□□□ -0.58
LTBP4-239ENST00000622565 IFI27L1Q96BM0 104 aa11.4□□□□□ -0.58
LTBP4-239ENST00000622565 TRAV12-1A0A0B4J245 112 aa11.39□□□□□ -0.59
LTBP4-239ENST00000622565 TMEM223A0PJW6 202 aa11.39□□□□□ -0.59
LTBP4-239ENST00000622565 TMEM238C9JI98 176 aa11.38□□□□□ -0.59
LTBP4-239ENST00000622565 FAM19A2Q8N3H0 131 aa11.38□□□□□ -0.59
LTBP4-239ENST00000622565 UBE2AP49459 152 aa11.36□□□□□ -0.59
LTBP4-239ENST00000622565 KRTAP13-2Q52LG2 175 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms