RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 HIST1H4GQ99525 98 aa11.82□□□□□ -0.52
PTCHD3-202ENST00000622555 TOMM7Q9P0U1 55 aa11.81□□□□□ -0.52
PTCHD3-202ENST00000622555 SMIM13P0DJ93 91 aa11.8□□□□□ -0.52
PTCHD3-202ENST00000622555 SPANXB1Q9NS25 103 aaPredicted RBP11.8□□□□□ -0.52
PTCHD3-202ENST00000622555 A0A1B0GWB2 263 aa11.8□□□□□ -0.52
PTCHD3-202ENST00000622555 COX7B2Q8TF08 81 aa11.8□□□□□ -0.52
PTCHD3-202ENST00000622555 LGALS3P17931 250 aaKnown RBP11.79□□□□□ -0.52
PTCHD3-202ENST00000622555 VAMP3Q15836 100 aa11.79□□□□□ -0.52
PTCHD3-202ENST00000622555 C1orf134Q5TEV5 83 aa11.79□□□□□ -0.52
PTCHD3-202ENST00000622555 Q6ZRN7 208 aaPredicted RBP11.79□□□□□ -0.52
PTCHD3-202ENST00000622555 KMT2AQ03164 3969 aa11.78□□□□□ -0.52
PTCHD3-202ENST00000622555 PRSS2P07478 247 aa11.78□□□□□ -0.52
PTCHD3-202ENST00000622555 PTTG1IPP53801 180 aa11.78□□□□□ -0.52
PTCHD3-202ENST00000622555 CFAP161Q6P656 301 aa11.78□□□□□ -0.52
PTCHD3-202ENST00000622555 C15orf56Q8N910 161 aa11.78□□□□□ -0.52
PTCHD3-202ENST00000622555 USP17L23D6RBM5 183 aa11.77□□□□□ -0.52
PTCHD3-202ENST00000622555 SPAG11BQ08648 103 aa11.77□□□□□ -0.52
PTCHD3-202ENST00000622555 SCGB1D4Q6XE38 83 aa11.77□□□□□ -0.52
PTCHD3-202ENST00000622555 LECT2O14960 151 aa11.77□□□□□ -0.53
PTCHD3-202ENST00000622555 HIGD2BQ4VC39 106 aa11.77□□□□□ -0.53
PTCHD3-202ENST00000622555 Q8IZM0 81 aa11.77□□□□□ -0.53
PTCHD3-202ENST00000622555 DNAH6Q9C0G6 4158 aa11.76□□□□□ -0.53
PTCHD3-202ENST00000622555 C6orf226Q5I0X4 101 aa11.76□□□□□ -0.53
PTCHD3-202ENST00000622555 LINC00526Q96FQ7 95 aa11.75□□□□□ -0.53
PTCHD3-202ENST00000622555 NHP2Q9NX24 153 aaKnown RBP11.75□□□□□ -0.53
PTCHD3-202ENST00000622555 ZNF561-AS1K7EIQ3 104 aa11.74□□□□□ -0.53
PTCHD3-202ENST00000622555 KIAA0087Q14695 138 aa11.74□□□□□ -0.53
PTCHD3-202ENST00000622555 RAB37Q96AX2 223 aa11.74□□□□□ -0.53
PTCHD3-202ENST00000622555 NDUFA12Q9UI09 145 aa11.74□□□□□ -0.53
PTCHD3-202ENST00000622555 GVQW2A0A096LPI5 108 aaPredicted RBP11.74□□□□□ -0.53
PTCHD3-202ENST00000622555 H3BUT2 72 aa11.74□□□□□ -0.53
PTCHD3-202ENST00000622555 K7ERJ3 54 aa11.74□□□□□ -0.53
PTCHD3-202ENST00000622555 WFDC2Q14508 124 aa11.73□□□□□ -0.53
PTCHD3-202ENST00000622555 A0A1W2PPM0 123 aa11.72□□□□□ -0.53
PTCHD3-202ENST00000622555 CKS1BP61024 79 aa11.72□□□□□ -0.53
PTCHD3-202ENST00000622555 SRSF9Q13242 221 aaKnown RBP eCLIP11.72□□□□□ -0.53
PTCHD3-202ENST00000622555 C2orf82Q6UX34 121 aa11.72□□□□□ -0.53
PTCHD3-202ENST00000622555 NDUFA1O15239 70 aa11.71□□□□□ -0.54
PTCHD3-202ENST00000622555 NTN5Q8WTR8 489 aaPredicted RBP11.71□□□□□ -0.54
PTCHD3-202ENST00000622555 A0A0J9YXY3 114 aa11.7□□□□□ -0.54
PTCHD3-202ENST00000622555 TMEM238LA0A1B0GVL6 79 aa11.7□□□□□ -0.54
PTCHD3-202ENST00000622555 LRCOL1A6NCL2 159 aa11.7□□□□□ -0.54
PTCHD3-202ENST00000622555 A6NJY4 79 aa11.7□□□□□ -0.54
PTCHD3-202ENST00000622555 CXCL5P42830 114 aa11.7□□□□□ -0.54
PTCHD3-202ENST00000622555 ZNF625Q96I27 306 aaPredicted RBP11.7□□□□□ -0.54
PTCHD3-202ENST00000622555 K7EP34 96 aa11.69□□□□□ -0.54
PTCHD3-202ENST00000622555 NAA38Q9BRA0 125 aaKnown RBP11.69□□□□□ -0.54
PTCHD3-202ENST00000622555 DNAH10Q8IVF4 4471 aa11.69□□□□□ -0.54
PTCHD3-202ENST00000622555 HYDINQ4G0P3 5121 aa11.69□□□□□ -0.54
PTCHD3-202ENST00000622555 C14orf177Q52M58 125 aa11.69□□□□□ -0.54
PTCHD3-202ENST00000622555 C2orf48Q96LS8 159 aa11.69□□□□□ -0.54
PTCHD3-202ENST00000622555 CAMK2N2Q96S95 79 aa11.69□□□□□ -0.54
PTCHD3-202ENST00000622555 LITAFQ99732 161 aa11.69□□□□□ -0.54
PTCHD3-202ENST00000622555 GAGE10A6NGK3 116 aa11.68□□□□□ -0.54
PTCHD3-202ENST00000622555 SFTA2Q6UW10 78 aa11.68□□□□□ -0.54
PTCHD3-202ENST00000622555 UNQ6190/PRO20217Q6UXQ8 127 aa11.67□□□□□ -0.54
PTCHD3-202ENST00000622555 GTF2H5Q6ZYL4 71 aa11.67□□□□□ -0.54
PTCHD3-202ENST00000622555 TMEM238C9JI98 176 aa11.66□□□□□ -0.54
PTCHD3-202ENST00000622555 RTL8CO15255 209 aa11.66□□□□□ -0.54
PTCHD3-202ENST00000622555 FABP2P12104 132 aa11.66□□□□□ -0.54
PTCHD3-202ENST00000622555 HERV-K104P63124 156 aa11.66□□□□□ -0.54
PTCHD3-202ENST00000622555 C10orf25Q5T742 122 aa11.66□□□□□ -0.54
PTCHD3-202ENST00000622555 A0A087WTM6 91 aa11.66□□□□□ -0.54
PTCHD3-202ENST00000622555 SACSQ9NZJ4 4579 aa11.65□□□□□ -0.54
PTCHD3-202ENST00000622555 F8WDY8 70 aa11.65□□□□□ -0.54
PTCHD3-202ENST00000622555 TIMM17BO60830 172 aa11.65□□□□□ -0.54
PTCHD3-202ENST00000622555 SYCNQ0VAF6 134 aa11.65□□□□□ -0.54
PTCHD3-202ENST00000622555 Q6ZRU5 148 aa11.64□□□□□ -0.55
PTCHD3-202ENST00000622555 SPANXDQ9BXN6 97 aa11.64□□□□□ -0.55
PTCHD3-202ENST00000622555 SPANXCQ9NY87 97 aa11.64□□□□□ -0.55
PTCHD3-202ENST00000622555 SPCS1Q9Y6A9 102 aa11.64□□□□□ -0.55
PTCHD3-202ENST00000622555 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.63□□□□□ -0.55
PTCHD3-202ENST00000622555 CFC1BP0CG36 223 aa11.63□□□□□ -0.55
PTCHD3-202ENST00000622555 CFC1P0CG37 223 aa11.63□□□□□ -0.55
PTCHD3-202ENST00000622555 MEIG1Q5JSS6 88 aa11.63□□□□□ -0.55
PTCHD3-202ENST00000622555 SLPIP03973 132 aa11.63□□□□□ -0.55
PTCHD3-202ENST00000622555 TNP2Q05952 138 aa11.63□□□□□ -0.55
PTCHD3-202ENST00000622555 Q8N814 137 aa11.63□□□□□ -0.55
PTCHD3-202ENST00000622555 CARD19Q96LW7 228 aa11.63□□□□□ -0.55
PTCHD3-202ENST00000622555 C6orf48Q9UBA6 75 aa11.63□□□□□ -0.55
PTCHD3-202ENST00000622555 C9orf116Q5BN46 136 aaPredicted RBP11.62□□□□□ -0.55
PTCHD3-202ENST00000622555 MUSTN1Q8IVN3 82 aa11.62□□□□□ -0.55
PTCHD3-202ENST00000622555 DNAH2Q9P225 4427 aa11.62□□□□□ -0.55
PTCHD3-202ENST00000622555 TRBV30A0A0K0K1B3 111 aa11.61□□□□□ -0.55
PTCHD3-202ENST00000622555 ADAMTSL4-AS1Q5T5F5 129 aa11.61□□□□□ -0.55
PTCHD3-202ENST00000622555 ERG28Q9UKR5 140 aa11.61□□□□□ -0.55
PTCHD3-202ENST00000622555 A0A0U1RRA0 63 aa11.6□□□□□ -0.55
PTCHD3-202ENST00000622555 A4D1N5 150 aa11.6□□□□□ -0.55
PTCHD3-202ENST00000622555 EIF4EBP3O60516 100 aaPredicted RBP11.6□□□□□ -0.55
PTCHD3-202ENST00000622555 PFN2P35080 140 aa11.6□□□□□ -0.55
PTCHD3-202ENST00000622555 RPL24P83731 157 aaKnown RBP11.6□□□□□ -0.55
PTCHD3-202ENST00000622555 CIRBPQ14011 172 aaKnown RBP11.6□□□□□ -0.55
PTCHD3-202ENST00000622555 CNBPP62633 177 aaKnown RBP11.59□□□□□ -0.55
PTCHD3-202ENST00000622555 PGPEP1Q9NXJ5 209 aa11.59□□□□□ -0.55
PTCHD3-202ENST00000622555 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.58□□□□□ -0.56
PTCHD3-202ENST00000622555 A0A0B4J2C4 111 aa11.58□□□□□ -0.56
PTCHD3-202ENST00000622555 TSPAN13O95857 204 aa11.58□□□□□ -0.56
PTCHD3-202ENST00000622555 LINC00158P58513 81 aa11.58□□□□□ -0.56
PTCHD3-202ENST00000622555 KMT2CQ8NEZ4 4911 aaKnown RBP11.58□□□□□ -0.56
PTCHD3-202ENST00000622555 RNF151Q2KHN1 245 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms