RNA–Protein interactions for RNA: ENST00000621453.4

FMR1-219, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-219ENST00000621453 TSPAN13O95857 204 aa18.86■□□□□ 0.61
FMR1-219ENST00000621453 CRPP02741 224 aa18.86■□□□□ 0.61
FMR1-219ENST00000621453 DNAH9Q9NYC9 4486 aa18.85■□□□□ 0.61
FMR1-219ENST00000621453 LINC00308Q8TCZ7 52 aa18.84■□□□□ 0.61
FMR1-219ENST00000621453 MALP21145 153 aa18.84■□□□□ 0.61
FMR1-219ENST00000621453 GAGE12HA6NDE8 117 aa18.83■□□□□ 0.6
FMR1-219ENST00000621453 UBE2WQ96B02 151 aa18.83■□□□□ 0.6
FMR1-219ENST00000621453 COPS9Q8WXC6 57 aa18.82■□□□□ 0.6
FMR1-219ENST00000621453 B9D2Q9BPU9 175 aa18.82■□□□□ 0.6
FMR1-219ENST00000621453 TRAV8-4A0A0B4J246 113 aa18.81■□□□□ 0.6
FMR1-219ENST00000621453 IBA57-AS1B1ANH7 110 aa18.79■□□□□ 0.6
FMR1-219ENST00000621453 LINC01556Q5JQF7 62 aa18.79■□□□□ 0.6
FMR1-219ENST00000621453 KIAA0087Q14695 138 aa18.78■□□□□ 0.6
FMR1-219ENST00000621453 SOSTDC1Q6X4U4 206 aa18.78■□□□□ 0.6
FMR1-219ENST00000621453 CFAP161Q6P656 301 aa18.76■□□□□ 0.59
FMR1-219ENST00000621453 PPDPFQ9H3Y8 114 aa18.76■□□□□ 0.59
FMR1-219ENST00000621453 ERG28Q9UKR5 140 aa18.76■□□□□ 0.59
FMR1-219ENST00000621453 CXCL5P42830 114 aa18.75■□□□□ 0.59
FMR1-219ENST00000621453 LINC00158P58513 81 aa18.75■□□□□ 0.59
FMR1-219ENST00000621453 CKS1BP61024 79 aa18.75■□□□□ 0.59
FMR1-219ENST00000621453 MIR7-3HGQ8N6C7 128 aa18.75■□□□□ 0.59
FMR1-219ENST00000621453 C2orf82Q6UX34 121 aa18.75■□□□□ 0.59
FMR1-219ENST00000621453 KLK5Q9Y337 293 aaPredicted RBP18.73■□□□□ 0.59
FMR1-219ENST00000621453 LOC107984156A0A0G2JMH3 177 aa18.73■□□□□ 0.59
FMR1-219ENST00000621453 ARL17AQ8IVW1 177 aa18.73■□□□□ 0.59
FMR1-219ENST00000621453 PFN2P35080 140 aa18.71■□□□□ 0.59
FMR1-219ENST00000621453 LINC00588Q9Y4M8 146 aa18.71■□□□□ 0.59
FMR1-219ENST00000621453 H7C2G1 150 aa18.71■□□□□ 0.59
FMR1-219ENST00000621453 DNAH10OSP0CZ25 163 aa18.71■□□□□ 0.59
FMR1-219ENST00000621453 LYRM7Q5U5X0 104 aa18.7■□□□□ 0.58
FMR1-219ENST00000621453 CCL18P55774 89 aa18.69■□□□□ 0.58
FMR1-219ENST00000621453 Q1RN00 199 aa18.69■□□□□ 0.58
FMR1-219ENST00000621453 SPAG11BQ08648 103 aa18.69■□□□□ 0.58
FMR1-219ENST00000621453 COL7A1Q02388 2944 aa18.67■□□□□ 0.58
FMR1-219ENST00000621453 KRTAP26-1Q6PEX3 210 aa18.67■□□□□ 0.58
FMR1-219ENST00000621453 PSMB2P49721 201 aa18.66■□□□□ 0.58
FMR1-219ENST00000621453 H3BMG7 143 aa18.64■□□□□ 0.57
FMR1-219ENST00000621453 RPL13AP40429 203 aaKnown RBP18.64■□□□□ 0.57
FMR1-219ENST00000621453 SCGB1C2P0DMR2 95 aa18.63■□□□□ 0.57
FMR1-219ENST00000621453 C1orf43Q9BWL3 253 aa18.63■□□□□ 0.57
FMR1-219ENST00000621453 COX17Q14061 63 aa18.63■□□□□ 0.57
FMR1-219ENST00000621453 C6orf223Q8N319 242 aa18.63■□□□□ 0.57
FMR1-219ENST00000621453 NHLRC4P0CG21 123 aaPredicted RBP18.62■□□□□ 0.57
FMR1-219ENST00000621453 SND1-IT1Q9HBX3 110 aa18.62■□□□□ 0.57
FMR1-219ENST00000621453 TRBV30A0A0K0K1B3 111 aa18.6■□□□□ 0.57
FMR1-219ENST00000621453 DNHD1Q96M86 4753 aa18.6■□□□□ 0.57
FMR1-219ENST00000621453 LINC00526Q96FQ7 95 aa18.6■□□□□ 0.57
FMR1-219ENST00000621453 TRBV20-1A0A075B6N2 111 aa18.59■□□□□ 0.57
FMR1-219ENST00000621453 UPK3BQ9BT76 320 aa18.59■□□□□ 0.57
FMR1-219ENST00000621453 IGKV2D-24A0A075B6R9 120 aa18.58■□□□□ 0.57
FMR1-219ENST00000621453 TCL1BO95988 128 aa18.58■□□□□ 0.57
FMR1-219ENST00000621453 UNQ6190/PRO20217Q6UXQ8 127 aa18.58■□□□□ 0.57
FMR1-219ENST00000621453 STAB2Q8WWQ8 2551 aa18.58■□□□□ 0.56
FMR1-219ENST00000621453 TRIAP1O43715 76 aa18.58■□□□□ 0.56
FMR1-219ENST00000621453 C9orf116Q5BN46 136 aaPredicted RBP18.57■□□□□ 0.56
FMR1-219ENST00000621453 C10orf25Q5T742 122 aa18.57■□□□□ 0.56
FMR1-219ENST00000621453 NTN5Q8WTR8 489 aaPredicted RBP18.56■□□□□ 0.56
FMR1-219ENST00000621453 Q9HAA7 133 aa18.54■□□□□ 0.56
FMR1-219ENST00000621453 DYNC2H1Q8NCM8 4307 aaKnown RBP18.53■□□□□ 0.56
FMR1-219ENST00000621453 IGKV2-28A0A075B6P5 120 aa18.53■□□□□ 0.56
FMR1-219ENST00000621453 TRAV13-2A0A0B4J235 113 aa18.53■□□□□ 0.56
FMR1-219ENST00000621453 F8W1H4 67 aa18.53■□□□□ 0.56
FMR1-219ENST00000621453 IGKV2D-28P01615 120 aa18.53■□□□□ 0.56
FMR1-219ENST00000621453 ZNF561-AS1K7EIQ3 104 aa18.52■□□□□ 0.56
FMR1-219ENST00000621453 C15orf56Q8N910 161 aa18.52■□□□□ 0.56
FMR1-219ENST00000621453 HIGD2BQ4VC39 106 aa18.52■□□□□ 0.55
FMR1-219ENST00000621453 GVQW2A0A096LPI5 108 aaPredicted RBP18.51■□□□□ 0.55
FMR1-219ENST00000621453 COX6CP09669 75 aa18.51■□□□□ 0.55
FMR1-219ENST00000621453 LINC00337Q8N6G1 96 aa18.5■□□□□ 0.55
FMR1-219ENST00000621453 MUC7Q8TAX7 377 aa18.5■□□□□ 0.55
FMR1-219ENST00000621453 APLNQ9ULZ1 77 aa18.5■□□□□ 0.55
FMR1-219ENST00000621453 DNAH1Q9P2D7 4330 aa18.49■□□□□ 0.55
FMR1-219ENST00000621453 PRKDCP78527 4128 aaKnown RBP18.49■□□□□ 0.55
FMR1-219ENST00000621453 MTURNQ8N3F0 131 aa18.49■□□□□ 0.55
FMR1-219ENST00000621453 PRO0461Q9UI25 63 aa18.49■□□□□ 0.55
FMR1-219ENST00000621453 C6orf48Q9UBA6 75 aa18.48■□□□□ 0.55
FMR1-219ENST00000621453 CAMK2N2Q96S95 79 aa18.46■□□□□ 0.55
FMR1-219ENST00000621453 WFDC2Q14508 124 aa18.45■□□□□ 0.54
FMR1-219ENST00000621453 ATXN8Q156A1 80 aa18.45■□□□□ 0.54
FMR1-219ENST00000621453 C2orf48Q96LS8 159 aa18.45■□□□□ 0.54
FMR1-219ENST00000621453 KRTAP21-3Q3LHN1 58 aa18.44■□□□□ 0.54
FMR1-219ENST00000621453 NDUFC2O95298 119 aa18.42■□□□□ 0.54
FMR1-219ENST00000621453 RMI2Q96E14 147 aa18.42■□□□□ 0.54
FMR1-219ENST00000621453 NUPR2A6NF83 97 aa18.41■□□□□ 0.54
FMR1-219ENST00000621453 UBE2DNLQ8IWF7 75 aa18.41■□□□□ 0.54
FMR1-219ENST00000621453 LYSTQ99698 3801 aa18.4■□□□□ 0.54
FMR1-219ENST00000621453 Q6ZRU5 148 aa18.39■□□□□ 0.54
FMR1-219ENST00000621453 F8WDY8 70 aa18.39■□□□□ 0.53
FMR1-219ENST00000621453 CLEC2BQ92478 149 aa18.39■□□□□ 0.53
FMR1-219ENST00000621453 RPL28P46779 137 aaKnown RBP18.38■□□□□ 0.53
FMR1-219ENST00000621453 SMCPP49901 116 aaPredicted RBP18.37■□□□□ 0.53
FMR1-219ENST00000621453 CSMD3Q7Z407 3707 aa18.37■□□□□ 0.53
FMR1-219ENST00000621453 OCIAD2Q56VL3 154 aa18.37■□□□□ 0.53
FMR1-219ENST00000621453 OR13C6PQ8NH95 151 aa18.37■□□□□ 0.53
FMR1-219ENST00000621453 LST1O00453 97 aa18.36■□□□□ 0.53
FMR1-219ENST00000621453 LINC01620Q4KN68 170 aa18.36■□□□□ 0.53
FMR1-219ENST00000621453 DNAH7Q8WXX0 4024 aa18.35■□□□□ 0.53
FMR1-219ENST00000621453 SMIM11BQ8TCY0 68 aa18.35■□□□□ 0.53
FMR1-219ENST00000621453 C9JAW5 83 aa18.34■□□□□ 0.53
FMR1-219ENST00000621453 PRR3P79522 188 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms