RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 ERG28Q9UKR5 140 aa8.64□□□□□ -1.03
TNFAIP3-209ENST00000619035 DNHD1Q96M86 4753 aa8.63□□□□□ -1.03
TNFAIP3-209ENST00000619035 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.63□□□□□ -1.03
TNFAIP3-209ENST00000619035 TCL1BO95988 128 aa8.63□□□□□ -1.03
TNFAIP3-209ENST00000619035 Q1RN00 199 aa8.63□□□□□ -1.03
TNFAIP3-209ENST00000619035 SOSTDC1Q6X4U4 206 aa8.63□□□□□ -1.03
TNFAIP3-209ENST00000619035 SVIPQ8NHG7 77 aa8.63□□□□□ -1.03
TNFAIP3-209ENST00000619035 COL7A1Q02388 2944 aa8.63□□□□□ -1.03
TNFAIP3-209ENST00000619035 TIMM17BO60830 172 aa8.63□□□□□ -1.03
TNFAIP3-209ENST00000619035 CRPP02741 224 aa8.63□□□□□ -1.03
TNFAIP3-209ENST00000619035 SCGB1C2P0DMR2 95 aa8.63□□□□□ -1.03
TNFAIP3-209ENST00000619035 CIRBPQ14011 172 aaKnown RBP8.63□□□□□ -1.03
TNFAIP3-209ENST00000619035 UBE2WQ96B02 151 aa8.63□□□□□ -1.03
TNFAIP3-209ENST00000619035 CD164L2Q6UWJ8 174 aa8.62□□□□□ -1.03
TNFAIP3-209ENST00000619035 LINC01561Q8N1V8 128 aa8.62□□□□□ -1.03
TNFAIP3-209ENST00000619035 LINC00308Q8TCZ7 52 aa8.62□□□□□ -1.03
TNFAIP3-209ENST00000619035 PRO0461Q9UI25 63 aa8.62□□□□□ -1.03
TNFAIP3-209ENST00000619035 COX7A2LO14548 114 aa8.61□□□□□ -1.03
TNFAIP3-209ENST00000619035 ENHOQ6UWT2 76 aa8.61□□□□□ -1.03
TNFAIP3-209ENST00000619035 MALP21145 153 aa8.61□□□□□ -1.03
TNFAIP3-209ENST00000619035 PRR34Q9NV39 138 aa8.61□□□□□ -1.03
TNFAIP3-209ENST00000619035 DNAH9Q9NYC9 4486 aa8.6□□□□□ -1.03
TNFAIP3-209ENST00000619035 STAB2Q8WWQ8 2551 aa8.6□□□□□ -1.03
TNFAIP3-209ENST00000619035 GAGE12HA6NDE8 117 aa8.6□□□□□ -1.03
TNFAIP3-209ENST00000619035 F8W1H4 67 aa8.59□□□□□ -1.03
TNFAIP3-209ENST00000619035 SMCPP49901 116 aaPredicted RBP8.59□□□□□ -1.03
TNFAIP3-209ENST00000619035 HERV-K104P63124 156 aa8.59□□□□□ -1.03
TNFAIP3-209ENST00000619035 FOXI1Q12951 378 aa8.59□□□□□ -1.03
TNFAIP3-209ENST00000619035 ETDBQ3ZM63 59 aa8.59□□□□□ -1.03
TNFAIP3-209ENST00000619035 C6orf226Q5I0X4 101 aa8.59□□□□□ -1.03
TNFAIP3-209ENST00000619035 TRIAP1O43715 76 aa8.59□□□□□ -1.03
TNFAIP3-209ENST00000619035 IFITM1P13164 125 aa8.58□□□□□ -1.04
TNFAIP3-209ENST00000619035 RPL13AP40429 203 aaKnown RBP8.57□□□□□ -1.04
TNFAIP3-209ENST00000619035 LINC00588Q9Y4M8 146 aa8.57□□□□□ -1.04
TNFAIP3-209ENST00000619035 TRAV8-4A0A0B4J246 113 aa8.57□□□□□ -1.04
TNFAIP3-209ENST00000619035 PFN2P35080 140 aa8.57□□□□□ -1.04
TNFAIP3-209ENST00000619035 CCL18P55774 89 aa8.57□□□□□ -1.04
TNFAIP3-209ENST00000619035 LINC01556Q5JQF7 62 aa8.57□□□□□ -1.04
TNFAIP3-209ENST00000619035 C2orf82Q6UX34 121 aa8.57□□□□□ -1.04
TNFAIP3-209ENST00000619035 MIR7-3HGQ8N6C7 128 aa8.57□□□□□ -1.04
TNFAIP3-209ENST00000619035 K7ERU9 68 aa8.56□□□□□ -1.04
TNFAIP3-209ENST00000619035 LINC00158P58513 81 aa8.56□□□□□ -1.04
TNFAIP3-209ENST00000619035 LYRM7Q5U5X0 104 aa8.56□□□□□ -1.04
TNFAIP3-209ENST00000619035 CFAP161Q6P656 301 aa8.56□□□□□ -1.04
TNFAIP3-209ENST00000619035 Q8IZM0 81 aa8.56□□□□□ -1.04
TNFAIP3-209ENST00000619035 CKS1BP61024 79 aa8.55□□□□□ -1.04
TNFAIP3-209ENST00000619035 DNAH10OSP0CZ25 163 aa8.54□□□□□ -1.04
TNFAIP3-209ENST00000619035 VPS25Q9BRG1 176 aa8.54□□□□□ -1.04
TNFAIP3-209ENST00000619035 MEGF8Q7Z7M0 2845 aa8.54□□□□□ -1.04
TNFAIP3-209ENST00000619035 TRBV20-1A0A075B6N2 111 aa8.54□□□□□ -1.04
TNFAIP3-209ENST00000619035 CLEC2BQ92478 149 aa8.54□□□□□ -1.04
TNFAIP3-209ENST00000619035 UPK3BQ9BT76 320 aa8.54□□□□□ -1.04
TNFAIP3-209ENST00000619035 Q9HAA7 133 aa8.54□□□□□ -1.04
TNFAIP3-209ENST00000619035 TRBV30A0A0K0K1B3 111 aa8.53□□□□□ -1.04
TNFAIP3-209ENST00000619035 LINC00526Q96FQ7 95 aa8.53□□□□□ -1.04
TNFAIP3-209ENST00000619035 C9JAW5 83 aa8.52□□□□□ -1.04
TNFAIP3-209ENST00000619035 SPAG11BQ08648 103 aa8.52□□□□□ -1.04
TNFAIP3-209ENST00000619035 KIAA0087Q14695 138 aa8.52□□□□□ -1.04
TNFAIP3-209ENST00000619035 IGKV2D-24A0A075B6R9 120 aa8.52□□□□□ -1.05
TNFAIP3-209ENST00000619035 C1orf43Q9BWL3 253 aa8.52□□□□□ -1.05
TNFAIP3-209ENST00000619035 C6orf223Q8N319 242 aa8.51□□□□□ -1.05
TNFAIP3-209ENST00000619035 PRKDCP78527 4128 aaKnown RBP8.51□□□□□ -1.05
TNFAIP3-209ENST00000619035 IBA57-AS1B1ANH7 110 aa8.51□□□□□ -1.05
TNFAIP3-209ENST00000619035 NUPR2A6NF83 97 aa8.5□□□□□ -1.05
TNFAIP3-209ENST00000619035 C9orf116Q5BN46 136 aaPredicted RBP8.5□□□□□ -1.05
TNFAIP3-209ENST00000619035 SND1-IT1Q9HBX3 110 aa8.5□□□□□ -1.05
TNFAIP3-209ENST00000619035 KLK5Q9Y337 293 aaPredicted RBP8.5□□□□□ -1.05
TNFAIP3-209ENST00000619035 IGKV2-28A0A075B6P5 120 aa8.5□□□□□ -1.05
TNFAIP3-209ENST00000619035 IGKV2D-28P01615 120 aa8.5□□□□□ -1.05
TNFAIP3-209ENST00000619035 CXCL5P42830 114 aa8.5□□□□□ -1.05
TNFAIP3-209ENST00000619035 COPS9Q8WXC6 57 aa8.5□□□□□ -1.05
TNFAIP3-209ENST00000619035 SLC25A20O43772 301 aa8.49□□□□□ -1.05
TNFAIP3-209ENST00000619035 ATXN8Q156A1 80 aa8.49□□□□□ -1.05
TNFAIP3-209ENST00000619035 HIGD2BQ4VC39 106 aa8.49□□□□□ -1.05
TNFAIP3-209ENST00000619035 PPDPFQ9H3Y8 114 aa8.49□□□□□ -1.05
TNFAIP3-209ENST00000619035 LINC01620Q4KN68 170 aa8.49□□□□□ -1.05
TNFAIP3-209ENST00000619035 KRTAP26-1Q6PEX3 210 aa8.49□□□□□ -1.05
TNFAIP3-209ENST00000619035 UBE2DNLQ8IWF7 75 aa8.49□□□□□ -1.05
TNFAIP3-209ENST00000619035 LINC00337Q8N6G1 96 aa8.49□□□□□ -1.05
TNFAIP3-209ENST00000619035 UNQ6190/PRO20217Q6UXQ8 127 aa8.48□□□□□ -1.05
TNFAIP3-209ENST00000619035 APLNQ9ULZ1 77 aa8.48□□□□□ -1.05
TNFAIP3-209ENST00000619035 ANKRD29Q8N6D5 301 aa8.47□□□□□ -1.05
TNFAIP3-209ENST00000619035 COX6CP09669 75 aa8.47□□□□□ -1.05
TNFAIP3-209ENST00000619035 C10orf25Q5T742 122 aa8.47□□□□□ -1.05
TNFAIP3-209ENST00000619035 CARD19Q96LW7 228 aa8.47□□□□□ -1.05
TNFAIP3-209ENST00000619035 LYSTQ99698 3801 aa8.46□□□□□ -1.05
TNFAIP3-209ENST00000619035 ZNF561-AS1K7EIQ3 104 aa8.46□□□□□ -1.05
TNFAIP3-209ENST00000619035 CBY1Q9Y3M2 126 aa8.46□□□□□ -1.05
TNFAIP3-209ENST00000619035 PRR3P79522 188 aaKnown RBP8.45□□□□□ -1.06
TNFAIP3-209ENST00000619035 CSMD3Q7Z407 3707 aa8.45□□□□□ -1.06
TNFAIP3-209ENST00000619035 TEN1Q86WV5 123 aa8.45□□□□□ -1.06
TNFAIP3-209ENST00000619035 C15orf56Q8N910 161 aa8.45□□□□□ -1.06
TNFAIP3-209ENST00000619035 LST1O00453 97 aa8.44□□□□□ -1.06
TNFAIP3-209ENST00000619035 NTN5Q8WTR8 489 aaPredicted RBP8.44□□□□□ -1.06
TNFAIP3-209ENST00000619035 RMI2Q96E14 147 aa8.44□□□□□ -1.06
TNFAIP3-209ENST00000619035 COX17Q14061 63 aa8.43□□□□□ -1.06
TNFAIP3-209ENST00000619035 CAMK2N2Q96S95 79 aa8.43□□□□□ -1.06
TNFAIP3-209ENST00000619035 TRAV13-2A0A0B4J235 113 aa8.42□□□□□ -1.06
TNFAIP3-209ENST00000619035 TRBV10-2A0A0K0K1G8 114 aa8.42□□□□□ -1.06
TNFAIP3-209ENST00000619035 F8WDY8 70 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms