RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 APOC4P55056 127 aa4.05□□□□□ -1.76
SYNCRIP-204ENST00000616122 CHCHD7Q9BUK0 85 aa4.05□□□□□ -1.76
SYNCRIP-204ENST00000616122 NDUFA1O15239 70 aa4.05□□□□□ -1.76
SYNCRIP-204ENST00000616122 SPINT4Q6UDR6 99 aa4.05□□□□□ -1.76
SYNCRIP-204ENST00000616122 KLK12Q9UKR0 248 aa4.05□□□□□ -1.76
SYNCRIP-204ENST00000616122 A0A096LNT2 108 aa4.05□□□□□ -1.76
SYNCRIP-204ENST00000616122 COX7A2LO14548 114 aa4.05□□□□□ -1.76
SYNCRIP-204ENST00000616122 COL27A1Q8IZC6 1860 aaPredicted RBP4.05□□□□□ -1.76
SYNCRIP-204ENST00000616122 XGP55808 180 aa4.04□□□□□ -1.76
SYNCRIP-204ENST00000616122 OVOL2Q9BRP0 275 aa4.04□□□□□ -1.76
SYNCRIP-204ENST00000616122 TIMM17BO60830 172 aa4.04□□□□□ -1.76
SYNCRIP-204ENST00000616122 LAMA5O15230 3695 aa4.04□□□□□ -1.76
SYNCRIP-204ENST00000616122 TRAV26-1A0A087WT03 109 aa4.04□□□□□ -1.76
SYNCRIP-204ENST00000616122 SNURFQ9Y675 71 aa4.04□□□□□ -1.76
SYNCRIP-204ENST00000616122 OTOGQ6ZRI0 2925 aa4.04□□□□□ -1.76
SYNCRIP-204ENST00000616122 LST1O00453 97 aa4.04□□□□□ -1.76
SYNCRIP-204ENST00000616122 C9orf66Q5T8R8 295 aa4.04□□□□□ -1.76
SYNCRIP-204ENST00000616122 Q8N2B8 174 aa4.04□□□□□ -1.76
SYNCRIP-204ENST00000616122 LAMTOR3Q9UHA4 124 aa4.04□□□□□ -1.76
SYNCRIP-204ENST00000616122 SMR3AQ99954 134 aa4.04□□□□□ -1.76
SYNCRIP-204ENST00000616122 PKIGQ9Y2B9 76 aa4.03□□□□□ -1.76
SYNCRIP-204ENST00000616122 CSDC2Q9Y534 153 aaKnown RBP4.03□□□□□ -1.76
SYNCRIP-204ENST00000616122 ASPMQ8IZT6 3477 aa4.03□□□□□ -1.76
SYNCRIP-204ENST00000616122 ZNF561-AS1K7EIQ3 104 aa4.03□□□□□ -1.76
SYNCRIP-204ENST00000616122 Q9HAA7 133 aa4.03□□□□□ -1.76
SYNCRIP-204ENST00000616122 IBA57-AS1B1ANH7 110 aa4.03□□□□□ -1.76
SYNCRIP-204ENST00000616122 B5MCH6 92 aa4.03□□□□□ -1.76
SYNCRIP-204ENST00000616122 FHL3Q13643 280 aa4.03□□□□□ -1.76
SYNCRIP-204ENST00000616122 SPAG11BQ08648 103 aa4.03□□□□□ -1.76
SYNCRIP-204ENST00000616122 TMEM126AQ9H061 195 aa4.03□□□□□ -1.76
SYNCRIP-204ENST00000616122 INAFM1C9JVW0 142 aa4.03□□□□□ -1.76
SYNCRIP-204ENST00000616122 NTM-AS1Q6ZSK4 140 aa4.03□□□□□ -1.77
SYNCRIP-204ENST00000616122 LINC00269Q8N2A0 174 aa4.03□□□□□ -1.77
SYNCRIP-204ENST00000616122 SMCPP49901 116 aaPredicted RBP4.02□□□□□ -1.77
SYNCRIP-204ENST00000616122 CCL18P55774 89 aa4.02□□□□□ -1.77
SYNCRIP-204ENST00000616122 CLUHP3Q96NS8 147 aa4.02□□□□□ -1.77
SYNCRIP-204ENST00000616122 WDFY3Q8IZQ1 3526 aa4.02□□□□□ -1.77
SYNCRIP-204ENST00000616122 IGLV4-60A0A075B6I1 120 aa4.02□□□□□ -1.77
SYNCRIP-204ENST00000616122 LINC01554Q52M75 96 aa4.02□□□□□ -1.77
SYNCRIP-204ENST00000616122 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.02□□□□□ -1.77
SYNCRIP-204ENST00000616122 A8MTW9 85 aa4.02□□□□□ -1.77
SYNCRIP-204ENST00000616122 TRACP01848 142 aa4.02□□□□□ -1.77
SYNCRIP-204ENST00000616122 C14orf132Q9NPU4 83 aa4.02□□□□□ -1.77
SYNCRIP-204ENST00000616122 IGHV3OR16-9A0A0B4J2B5 98 aa4.01□□□□□ -1.77
SYNCRIP-204ENST00000616122 IGLV5-39A0A0G2JS06 123 aa4.01□□□□□ -1.77
SYNCRIP-204ENST00000616122 WFDC9Q8NEX5 89 aa4.01□□□□□ -1.77
SYNCRIP-204ENST00000616122 TENM2Q9NT68 2774 aa4.01□□□□□ -1.77
SYNCRIP-204ENST00000616122 DMBT1Q9UGM3 2413 aaPredicted RBP4.01□□□□□ -1.77
SYNCRIP-204ENST00000616122 ACYP1P07311 99 aa4.01□□□□□ -1.77
SYNCRIP-204ENST00000616122 SPANXDQ9BXN6 97 aa4.01□□□□□ -1.77
SYNCRIP-204ENST00000616122 LINC00959A0A1B0GUT2 108 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 NDUFC2O95298 119 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 HIGD2BQ4VC39 106 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 RNF183Q96D59 192 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 LYRM9A8MSI8 78 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 REG3AQ06141 175 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 FHL2Q14192 279 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 CHCHD10Q8WYQ3 142 aaPredicted RBP4□□□□□ -1.77
SYNCRIP-204ENST00000616122 PKD1L1Q8TDX9 2849 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 CXCL5P42830 114 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 COX6A2Q02221 97 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 DEFB121Q5J5C9 76 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 SMIM26A0A096LP01 95 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 RPL18AQ02543 176 aaKnown RBP4□□□□□ -1.77
SYNCRIP-204ENST00000616122 KIR2DL5BQ8NHK3 375 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 LINC00526Q96FQ7 95 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 CAMK2N2Q96S95 79 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 XAGE1AQ9HD64 81 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 H7C423 109 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 EIF4EBP3O60516 100 aaPredicted RBP4□□□□□ -1.77
SYNCRIP-204ENST00000616122 LINC00643Q86TS7 51 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 LINC00167Q96N53 147 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 UBL5Q9BZL1 73 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 V9GYY9 64 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 A0A087WZ39 114 aa4□□□□□ -1.77
SYNCRIP-204ENST00000616122 LY6G6DO95868 133 aa3.99□□□□□ -1.77
SYNCRIP-204ENST00000616122 C6orf99Q4VX62 202 aa3.99□□□□□ -1.77
SYNCRIP-204ENST00000616122 ORMDL1Q9P0S3 153 aa3.99□□□□□ -1.77
SYNCRIP-204ENST00000616122 IGLV5-45A0A087WSX0 123 aa3.99□□□□□ -1.77
SYNCRIP-204ENST00000616122 FAM236AA0A1B0GUQ0 79 aa3.99□□□□□ -1.77
SYNCRIP-204ENST00000616122 FAM236BA0A1B0GV22 79 aa3.99□□□□□ -1.77
SYNCRIP-204ENST00000616122 CD164L2Q6UWJ8 174 aa3.99□□□□□ -1.77
SYNCRIP-204ENST00000616122 IGKV2D-24A0A075B6R9 120 aa3.98□□□□□ -1.77
SYNCRIP-204ENST00000616122 IGHV4-28A0A0C4DH34 117 aa3.98□□□□□ -1.77
SYNCRIP-204ENST00000616122 MIFP14174 115 aa3.98□□□□□ -1.77
SYNCRIP-204ENST00000616122 SOSTDC1Q6X4U4 206 aa3.98□□□□□ -1.77
SYNCRIP-204ENST00000616122 RBM3P98179 157 aaKnown RBP3.97□□□□□ -1.77
SYNCRIP-204ENST00000616122 C9orf153Q5TBE3 101 aa3.97□□□□□ -1.77
SYNCRIP-204ENST00000616122 LINC00337Q8N6G1 96 aa3.97□□□□□ -1.77
SYNCRIP-204ENST00000616122 SRRM2Q9UQ35 2752 aaKnown RBP3.97□□□□□ -1.77
SYNCRIP-204ENST00000616122 IGKV3D-7A0A0C4DH55 119 aa3.97□□□□□ -1.77
SYNCRIP-204ENST00000616122 JMJD7-PLA2G4BH0Y9G9 81 aa3.97□□□□□ -1.77
SYNCRIP-204ENST00000616122 NKAPP1Q8N9T2 125 aa3.97□□□□□ -1.77
SYNCRIP-204ENST00000616122 SLPIP03973 132 aa3.97□□□□□ -1.77
SYNCRIP-204ENST00000616122 NDUFV3P56181 108 aaKnown RBP3.97□□□□□ -1.77
SYNCRIP-204ENST00000616122 LITAFQ99732 161 aa3.97□□□□□ -1.77
SYNCRIP-204ENST00000616122 UNQ6190/PRO20217Q6UXQ8 127 aa3.97□□□□□ -1.77
SYNCRIP-204ENST00000616122 RPL28P46779 137 aaKnown RBP3.96□□□□□ -1.77
SYNCRIP-204ENST00000616122 A0A1B0GUV1 79 aa3.96□□□□□ -1.78
SYNCRIP-204ENST00000616122 FAM240AA0A1B0GVK7 77 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms