RNA–Protein interactions for RNA: ENST00000606347.1

UCHL3-204, Transcript of ubiquitin C-terminal hydrolase L3, human

TSL 2

Gene UCHL3, Length 722 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UCHL3-204	ENST00000606347	RGPD2	P0DJD1	1756 aa		0.8	□□□□□ -2.28
UCHL3-204	ENST00000606347	FANCA	O15360	1455 aa		0.8	□□□□□ -2.28
UCHL3-204	ENST00000606347	IQSEC2	Q5JU85	1478 aa		0.8	□□□□□ -2.28
UCHL3-204	ENST00000606347	EHBP1L1	Q8N3D4	1523 aa		0.8	□□□□□ -2.28
UCHL3-204	ENST00000606347	LY6G6C	O95867	125 aa		0.8	□□□□□ -2.28
UCHL3-204	ENST00000606347	CAV3	P56539	151 aa		0.8	□□□□□ -2.28
UCHL3-204	ENST00000606347	DEFB121	Q5J5C9	76 aa		0.8	□□□□□ -2.28
UCHL3-204	ENST00000606347		Q6JHZ5	121 aa		0.8	□□□□□ -2.28
UCHL3-204	ENST00000606347	LINC00472	Q9H8W2	130 aa		0.8	□□□□□ -2.28
UCHL3-204	ENST00000606347	CRYBG1	Q9Y4K1	1723 aa		0.8	□□□□□ -2.28
UCHL3-204	ENST00000606347	SCN11A	Q9UI33	1791 aa		0.8	□□□□□ -2.28
UCHL3-204	ENST00000606347	NCOA2	Q15596	1464 aa		0.8	□□□□□ -2.28
UCHL3-204	ENST00000606347	ABCA8	O94911	1581 aa		0.79	□□□□□ -2.28
UCHL3-204	ENST00000606347	NHSL1	Q5SYE7	1610 aa		0.79	□□□□□ -2.28
UCHL3-204	ENST00000606347	MROH1	Q8NDA8	1641 aa		0.79	□□□□□ -2.28
UCHL3-204	ENST00000606347	KNDC1	Q76NI1	1749 aa		0.79	□□□□□ -2.28
UCHL3-204	ENST00000606347	RGPD8	O14715	1765 aa	Predicted RBP	0.79	□□□□□ -2.28
UCHL3-204	ENST00000606347	RGPD5	Q99666	1765 aa		0.79	□□□□□ -2.28
UCHL3-204	ENST00000606347		A0A087WWC5	75 aa		0.79	□□□□□ -2.28
UCHL3-204	ENST00000606347	MGP	P08493	103 aa		0.79	□□□□□ -2.28
UCHL3-204	ENST00000606347	C3orf79	P0CE67	100 aa		0.79	□□□□□ -2.28
UCHL3-204	ENST00000606347	COX8A	P10176	69 aa		0.79	□□□□□ -2.28
UCHL3-204	ENST00000606347	HAMP	P81172	84 aa		0.79	□□□□□ -2.28
UCHL3-204	ENST00000606347	C10orf113	Q5VZT2	155 aa		0.79	□□□□□ -2.28
UCHL3-204	ENST00000606347	FAM103A1	Q9BTL3	118 aa	Known RBP	0.79	□□□□□ -2.28
UCHL3-204	ENST00000606347	UBE2D4	Q9Y2X8	147 aa		0.79	□□□□□ -2.28
UCHL3-204	ENST00000606347	SSC5D	A1L4H1	1573 aa		0.79	□□□□□ -2.28
UCHL3-204	ENST00000606347	KNTC1	P50748	2209 aa		0.79	□□□□□ -2.28
UCHL3-204	ENST00000606347	SHPRH	Q149N8	1683 aa		0.78	□□□□□ -2.28
UCHL3-204	ENST00000606347	FXYD6-FXYD2	A0A087WZ82	144 aa		0.78	□□□□□ -2.28
UCHL3-204	ENST00000606347	TRBV30	A0A0K0K1B3	111 aa		0.78	□□□□□ -2.28
UCHL3-204	ENST00000606347	IFI6	P09912	130 aa		0.78	□□□□□ -2.28
UCHL3-204	ENST00000606347	IFI27	P40305	119 aa	Predicted RBP	0.78	□□□□□ -2.28
UCHL3-204	ENST00000606347	SMIM4	Q8WVI0	70 aa		0.78	□□□□□ -2.28
UCHL3-204	ENST00000606347	SPRR4	Q96PI1	79 aa		0.78	□□□□□ -2.28
UCHL3-204	ENST00000606347	ABCC1	P33527	1531 aa		0.78	□□□□□ -2.28
UCHL3-204	ENST00000606347	CUX1	P39880	1505 aa		0.78	□□□□□ -2.28
UCHL3-204	ENST00000606347	KCP	Q6ZWJ8	1503 aa		0.78	□□□□□ -2.28
UCHL3-204	ENST00000606347	ZNF831	Q5JPB2	1677 aa		0.78	□□□□□ -2.29
UCHL3-204	ENST00000606347	ITSN1	Q15811	1721 aa		0.78	□□□□□ -2.29
UCHL3-204	ENST00000606347	CNTRL	Q7Z7A1	2325 aa		0.77	□□□□□ -2.29
UCHL3-204	ENST00000606347		A0A096LNT2	108 aa		0.77	□□□□□ -2.29
UCHL3-204	ENST00000606347	TRAV21	A0A0B4J279	112 aa		0.77	□□□□□ -2.29
UCHL3-204	ENST00000606347	TRBV7-4	A0A0J9YYF1	115 aa		0.77	□□□□□ -2.29
UCHL3-204	ENST00000606347		G3V318	75 aa		0.77	□□□□□ -2.29
UCHL3-204	ENST00000606347		H0Y9P7	68 aa		0.77	□□□□□ -2.29
UCHL3-204	ENST00000606347	DEFB112	Q30KQ8	113 aa		0.77	□□□□□ -2.29
UCHL3-204	ENST00000606347	SPATA8	Q6RVD6	105 aa		0.77	□□□□□ -2.29
UCHL3-204	ENST00000606347		Q6ZRX8	168 aa		0.77	□□□□□ -2.29
UCHL3-204	ENST00000606347	SSBP3-AS1	Q7Z2R9	100 aa		0.77	□□□□□ -2.29
UCHL3-204	ENST00000606347	WFDC9	Q8NEX5	89 aa		0.77	□□□□□ -2.29
UCHL3-204	ENST00000606347	PLAC4	Q8WY50	150 aa		0.77	□□□□□ -2.29
UCHL3-204	ENST00000606347	EFCAB5	A4FU69	1503 aa		0.77	□□□□□ -2.29
UCHL3-204	ENST00000606347	ASXL1	Q8IXJ9	1541 aa		0.77	□□□□□ -2.29
UCHL3-204	ENST00000606347	CFAP74	Q9C0B2	1584 aa		0.77	□□□□□ -2.29
UCHL3-204	ENST00000606347	INO80	Q9ULG1	1556 aa	Predicted RBP	0.77	□□□□□ -2.29
UCHL3-204	ENST00000606347	PKD1L3	Q7Z443	1732 aa		0.77	□□□□□ -2.29
UCHL3-204	ENST00000606347	C5	P01031	1676 aa		0.76	□□□□□ -2.29
UCHL3-204	ENST00000606347	TARBP1	Q13395	1621 aa	Known RBP	0.76	□□□□□ -2.29
UCHL3-204	ENST00000606347	THOC2	Q8NI27	1593 aa	Known RBP	0.76	□□□□□ -2.29
UCHL3-204	ENST00000606347	GVQW2	A0A096LPI5	108 aa	Predicted RBP	0.76	□□□□□ -2.29
UCHL3-204	ENST00000606347		A0A1B0GU69	56 aa		0.76	□□□□□ -2.29
UCHL3-204	ENST00000606347		A0A1B0GUT8	65 aa		0.76	□□□□□ -2.29
UCHL3-204	ENST00000606347	COX17	Q14061	63 aa		0.76	□□□□□ -2.29
UCHL3-204	ENST00000606347	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		0.76	□□□□□ -2.29
UCHL3-204	ENST00000606347	TMEM263	Q8WUH6	116 aa	Known RBP	0.76	□□□□□ -2.29
UCHL3-204	ENST00000606347	LINC00846	Q9NV44	126 aa		0.76	□□□□□ -2.29
UCHL3-204	ENST00000606347	PLAC8	Q9NZF1	115 aa		0.76	□□□□□ -2.29
UCHL3-204	ENST00000606347	RGPD1	P0DJD0	1748 aa		0.75	□□□□□ -2.29
UCHL3-204	ENST00000606347	DIP2A	Q14689	1571 aa		0.75	□□□□□ -2.29
UCHL3-204	ENST00000606347	SETBP1	Q9Y6X0	1596 aa		0.75	□□□□□ -2.29
UCHL3-204	ENST00000606347	ABCC2	Q92887	1545 aa		0.75	□□□□□ -2.29
UCHL3-204	ENST00000606347	RALGAPB	Q86X10	1494 aa		0.75	□□□□□ -2.29
UCHL3-204	ENST00000606347	EEA1	Q15075	1411 aa		0.75	□□□□□ -2.29
UCHL3-204	ENST00000606347	ASXL3	Q9C0F0	2248 aa		0.75	□□□□□ -2.29
UCHL3-204	ENST00000606347	ATXN8	Q156A1	80 aa		0.75	□□□□□ -2.29
UCHL3-204	ENST00000606347	ATP5EP2	Q5VTU8	51 aa		0.75	□□□□□ -2.29
UCHL3-204	ENST00000606347	SMIM5	Q71RC9	77 aa		0.75	□□□□□ -2.29
UCHL3-204	ENST00000606347	GAFA1	Q96PS6	74 aa		0.75	□□□□□ -2.29
UCHL3-204	ENST00000606347	CRIPT	Q9P021	101 aa		0.75	□□□□□ -2.29
UCHL3-204	ENST00000606347	LAMC1	P11047	1609 aa		0.75	□□□□□ -2.29
UCHL3-204	ENST00000606347	PTPN23	Q9H3S7	1636 aa		0.75	□□□□□ -2.29
UCHL3-204	ENST00000606347	ALK	Q9UM73	1620 aa		0.75	□□□□□ -2.29
UCHL3-204	ENST00000606347	C1orf167	Q5SNV9	1468 aa		0.74	□□□□□ -2.29
UCHL3-204	ENST00000606347	LINC00959	A0A1B0GUT2	108 aa		0.74	□□□□□ -2.29
UCHL3-204	ENST00000606347	LINC01549	A6NIU2	74 aa		0.74	□□□□□ -2.29
UCHL3-204	ENST00000606347		K7EMI3	77 aa		0.74	□□□□□ -2.29
UCHL3-204	ENST00000606347	HMGA1	P17096	107 aa	Known RBP	0.74	□□□□□ -2.29
UCHL3-204	ENST00000606347	PRB3	Q04118	309 aa	Predicted RBP	0.74	□□□□□ -2.29
UCHL3-204	ENST00000606347	NREP	Q16612	68 aa		0.74	□□□□□ -2.29
UCHL3-204	ENST00000606347	SMIM11B	Q8TCY0	68 aa		0.74	□□□□□ -2.29
UCHL3-204	ENST00000606347	COL14A1	Q05707	1796 aa	Known RBP	0.74	□□□□□ -2.29
UCHL3-204	ENST00000606347	LRP6	O75581	1613 aa		0.74	□□□□□ -2.29
UCHL3-204	ENST00000606347	RAPGEF6	Q8TEU7	1601 aa		0.74	□□□□□ -2.29
UCHL3-204	ENST00000606347	CDC42BPG	Q6DT37	1551 aa		0.74	□□□□□ -2.29
UCHL3-204	ENST00000606347	ABCA10	Q8WWZ4	1543 aa		0.74	□□□□□ -2.29
UCHL3-204	ENST00000606347	NKTR	P30414	1462 aa	Known RBP	0.73	□□□□□ -2.29
UCHL3-204	ENST00000606347	ATP7B	P35670	1465 aa		0.73	□□□□□ -2.29
UCHL3-204	ENST00000606347	UBR3	Q6ZT12	1888 aa		0.73	□□□□□ -2.29
UCHL3-204	ENST00000606347	LRRC37A2	A6NM11	1700 aa		0.73	□□□□□ -2.29

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms