RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 APLNQ9ULZ1 77 aa11.95□□□□□ -0.5
SHKBP1-224ENST00000600718 IGLV10-54A0A075B6I4 117 aa11.94□□□□□ -0.5
SHKBP1-224ENST00000600718 UBE2WQ96B02 151 aa11.94□□□□□ -0.5
SHKBP1-224ENST00000600718 UPK3BQ9BT76 320 aa11.94□□□□□ -0.5
SHKBP1-224ENST00000600718 KLK5Q9Y337 293 aaPredicted RBP11.94□□□□□ -0.5
SHKBP1-224ENST00000600718 COL7A1Q02388 2944 aa11.94□□□□□ -0.5
SHKBP1-224ENST00000600718 SMCPP49901 116 aaPredicted RBP11.94□□□□□ -0.5
SHKBP1-224ENST00000600718 MIAQ16674 131 aa11.93□□□□□ -0.5
SHKBP1-224ENST00000600718 CDIP1Q9H305 208 aa11.93□□□□□ -0.5
SHKBP1-224ENST00000600718 COX7A2LO14548 114 aa11.92□□□□□ -0.5
SHKBP1-224ENST00000600718 NDUFA1O15239 70 aa11.92□□□□□ -0.5
SHKBP1-224ENST00000600718 COX7B2Q8TF08 81 aa11.92□□□□□ -0.5
SHKBP1-224ENST00000600718 TSPAN13O95857 204 aa11.91□□□□□ -0.5
SHKBP1-224ENST00000600718 C10orf126Q8N4M7 172 aa11.91□□□□□ -0.5
SHKBP1-224ENST00000600718 A0A0J9YXY3 114 aa11.9□□□□□ -0.5
SHKBP1-224ENST00000600718 SRSF9Q13242 221 aaKnown RBP eCLIP11.9□□□□□ -0.5
SHKBP1-224ENST00000600718 PPDPFLQ8WWR9 84 aa11.9□□□□□ -0.5
SHKBP1-224ENST00000600718 MEGF8Q7Z7M0 2845 aa11.9□□□□□ -0.51
SHKBP1-224ENST00000600718 PSMB2P49721 201 aa11.89□□□□□ -0.51
SHKBP1-224ENST00000600718 TRBV20-1A0A075B6N2 111 aa11.88□□□□□ -0.51
SHKBP1-224ENST00000600718 MALP21145 153 aa11.88□□□□□ -0.51
SHKBP1-224ENST00000600718 Q9H8V8 135 aa11.88□□□□□ -0.51
SHKBP1-224ENST00000600718 TOMM7Q9P0U1 55 aa11.88□□□□□ -0.51
SHKBP1-224ENST00000600718 LOC107984156A0A0G2JMH3 177 aa11.88□□□□□ -0.51
SHKBP1-224ENST00000600718 TEN1Q86WV5 123 aa11.88□□□□□ -0.51
SHKBP1-224ENST00000600718 ARL17AQ8IVW1 177 aa11.88□□□□□ -0.51
SHKBP1-224ENST00000600718 ZNF625Q96I27 306 aaPredicted RBP11.88□□□□□ -0.51
SHKBP1-224ENST00000600718 HERV-K104P63124 156 aa11.87□□□□□ -0.51
SHKBP1-224ENST00000600718 IBA57-AS1B1ANH7 110 aa11.86□□□□□ -0.51
SHKBP1-224ENST00000600718 TIMM17BO60830 172 aa11.86□□□□□ -0.51
SHKBP1-224ENST00000600718 Q8IZM0 81 aa11.86□□□□□ -0.51
SHKBP1-224ENST00000600718 PRSS2P07478 247 aa11.85□□□□□ -0.51
SHKBP1-224ENST00000600718 C6orf226Q5I0X4 101 aa11.85□□□□□ -0.51
SHKBP1-224ENST00000600718 SFTA2Q6UW10 78 aa11.85□□□□□ -0.51
SHKBP1-224ENST00000600718 UBE2DNLQ8IWF7 75 aa11.85□□□□□ -0.51
SHKBP1-224ENST00000600718 KRTAP26-1Q6PEX3 210 aa11.85□□□□□ -0.51
SHKBP1-224ENST00000600718 CARD19Q96LW7 228 aa11.85□□□□□ -0.51
SHKBP1-224ENST00000600718 STAB2Q8WWQ8 2551 aa11.84□□□□□ -0.51
SHKBP1-224ENST00000600718 MT-ATP8P03928 68 aa11.84□□□□□ -0.51
SHKBP1-224ENST00000600718 CIRBPQ14011 172 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-224ENST00000600718 C1orf43Q9BWL3 253 aa11.84□□□□□ -0.51
SHKBP1-224ENST00000600718 XGP55808 180 aa11.83□□□□□ -0.52
SHKBP1-224ENST00000600718 LITAFQ99732 161 aa11.83□□□□□ -0.52
SHKBP1-224ENST00000600718 M0QXV9 152 aa11.83□□□□□ -0.52
SHKBP1-224ENST00000600718 TCL1BO95988 128 aa11.83□□□□□ -0.52
SHKBP1-224ENST00000600718 PRKDCP78527 4128 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-224ENST00000600718 CFC1BP0CG36 223 aa11.81□□□□□ -0.52
SHKBP1-224ENST00000600718 CFC1P0CG37 223 aa11.81□□□□□ -0.52
SHKBP1-224ENST00000600718 KIAA0087Q14695 138 aa11.81□□□□□ -0.52
SHKBP1-224ENST00000600718 SPANXDQ9BXN6 97 aa11.81□□□□□ -0.52
SHKBP1-224ENST00000600718 SPANXCQ9NY87 97 aa11.81□□□□□ -0.52
SHKBP1-224ENST00000600718 IGKV2D-24A0A075B6R9 120 aa11.81□□□□□ -0.52
SHKBP1-224ENST00000600718 CXCL5P42830 114 aa11.8□□□□□ -0.52
SHKBP1-224ENST00000600718 ADAMTSL4-AS1Q5T5F5 129 aa11.8□□□□□ -0.52
SHKBP1-224ENST00000600718 ERG28Q9UKR5 140 aa11.8□□□□□ -0.52
SHKBP1-224ENST00000600718 MEIG1Q5JSS6 88 aa11.79□□□□□ -0.52
SHKBP1-224ENST00000600718 Q9HAA7 133 aa11.79□□□□□ -0.52
SHKBP1-224ENST00000600718 PRO1854Q9UHT4 67 aa11.79□□□□□ -0.52
SHKBP1-224ENST00000600718 RMI2Q96E14 147 aa11.79□□□□□ -0.52
SHKBP1-224ENST00000600718 SPAG11BQ08648 103 aa11.78□□□□□ -0.52
SHKBP1-224ENST00000600718 ANKRD29Q8N6D5 301 aa11.78□□□□□ -0.52
SHKBP1-224ENST00000600718 MUSTN1Q8IVN3 82 aa11.77□□□□□ -0.53
SHKBP1-224ENST00000600718 MUC7Q8TAX7 377 aa11.77□□□□□ -0.53
SHKBP1-224ENST00000600718 SCGB1C2P0DMR2 95 aa11.76□□□□□ -0.53
SHKBP1-224ENST00000600718 IFITM1P13164 125 aa11.76□□□□□ -0.53
SHKBP1-224ENST00000600718 C2orf82Q6UX34 121 aa11.76□□□□□ -0.53
SHKBP1-224ENST00000600718 SLC25A20O43772 301 aa11.74□□□□□ -0.53
SHKBP1-224ENST00000600718 DYNC2H1Q8NCM8 4307 aaKnown RBP11.74□□□□□ -0.53
SHKBP1-224ENST00000600718 A0A0B4J2C4 111 aa11.74□□□□□ -0.53
SHKBP1-224ENST00000600718 A0A0U1RRA0 63 aa11.74□□□□□ -0.53
SHKBP1-224ENST00000600718 COPS9Q8WXC6 57 aa11.74□□□□□ -0.53
SHKBP1-224ENST00000600718 LINC01600Q96MT4 127 aa11.74□□□□□ -0.53
SHKBP1-224ENST00000600718 WWC2-AS2Q96NR7 200 aa11.73□□□□□ -0.53
SHKBP1-224ENST00000600718 ZNF561-AS1K7EIQ3 104 aa11.72□□□□□ -0.53
SHKBP1-224ENST00000600718 LINC00158P58513 81 aa11.72□□□□□ -0.53
SHKBP1-224ENST00000600718 DAND5Q8N907 189 aa11.72□□□□□ -0.53
SHKBP1-224ENST00000600718 NTN5Q8WTR8 489 aaPredicted RBP11.72□□□□□ -0.53
SHKBP1-224ENST00000600718 ANAPC13Q9BS18 74 aa11.72□□□□□ -0.53
SHKBP1-224ENST00000600718 C6orf223Q8N319 242 aa11.72□□□□□ -0.53
SHKBP1-224ENST00000600718 C15orf56Q8N910 161 aa11.72□□□□□ -0.53
SHKBP1-224ENST00000600718 A4D1N5 150 aa11.71□□□□□ -0.53
SHKBP1-224ENST00000600718 LINC00308Q8TCZ7 52 aa11.71□□□□□ -0.53
SHKBP1-224ENST00000600718 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.7□□□□□ -0.54
SHKBP1-224ENST00000600718 TTC32Q5I0X7 151 aa11.7□□□□□ -0.54
SHKBP1-224ENST00000600718 KRTAP1-5Q9BYS1 174 aa11.7□□□□□ -0.54
SHKBP1-224ENST00000600718 PPDPFQ9H3Y8 114 aa11.7□□□□□ -0.54
SHKBP1-224ENST00000600718 C9JAW5 83 aa11.7□□□□□ -0.54
SHKBP1-224ENST00000600718 F8WDY8 70 aa11.7□□□□□ -0.54
SHKBP1-224ENST00000600718 PFN2P35080 140 aa11.7□□□□□ -0.54
SHKBP1-224ENST00000600718 NPC2P61916 151 aa11.7□□□□□ -0.54
SHKBP1-224ENST00000600718 COX17Q14061 63 aa11.7□□□□□ -0.54
SHKBP1-224ENST00000600718 UNQ6190/PRO20217Q6UXQ8 127 aa11.7□□□□□ -0.54
SHKBP1-224ENST00000600718 MIR7-3HGQ8N6C7 128 aa11.7□□□□□ -0.54
SHKBP1-224ENST00000600718 LINC00526Q96FQ7 95 aa11.7□□□□□ -0.54
SHKBP1-224ENST00000600718 FBN3Q75N90 2809 aa11.69□□□□□ -0.54
SHKBP1-224ENST00000600718 HIGD2BQ4VC39 106 aa11.69□□□□□ -0.54
SHKBP1-224ENST00000600718 C2orf48Q96LS8 159 aa11.69□□□□□ -0.54
SHKBP1-224ENST00000600718 GVQW2A0A096LPI5 108 aaPredicted RBP11.68□□□□□ -0.54
SHKBP1-224ENST00000600718 NBDYA0A0U1RRE5 68 aa11.68□□□□□ -0.54
SHKBP1-224ENST00000600718 EIF4EBP3O60516 100 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms