RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 LINC00158P58513 81 aa10.51□□□□□ -0.73
MBD1-217ENST00000588937 FOXI1Q12951 378 aa10.51□□□□□ -0.73
MBD1-217ENST00000588937 KRTAP21-3Q3LHN1 58 aa10.51□□□□□ -0.73
MBD1-217ENST00000588937 LINC01620Q4KN68 170 aa10.51□□□□□ -0.73
MBD1-217ENST00000588937 CLPSL2Q6UWE3 100 aa10.51□□□□□ -0.73
MBD1-217ENST00000588937 MIR7-3HGQ8N6C7 128 aa10.51□□□□□ -0.73
MBD1-217ENST00000588937 PKD1L1Q8TDX9 2849 aa10.5□□□□□ -0.73
MBD1-217ENST00000588937 REG3AQ06141 175 aa10.5□□□□□ -0.73
MBD1-217ENST00000588937 PPDPFLQ8WWR9 84 aa10.5□□□□□ -0.73
MBD1-217ENST00000588937 TRAV13-2A0A0B4J235 113 aa10.49□□□□□ -0.73
MBD1-217ENST00000588937 COX7A2LO14548 114 aa10.49□□□□□ -0.73
MBD1-217ENST00000588937 DNAH3Q8TD57 4116 aa10.49□□□□□ -0.73
MBD1-217ENST00000588937 TRBV10-2A0A0K0K1G8 114 aa10.48□□□□□ -0.73
MBD1-217ENST00000588937 H3BNG1 76 aa10.48□□□□□ -0.73
MBD1-217ENST00000588937 CXCL5P42830 114 aa10.48□□□□□ -0.73
MBD1-217ENST00000588937 CHCHD10Q8WYQ3 142 aaPredicted RBP10.48□□□□□ -0.73
MBD1-217ENST00000588937 LINC01600Q96MT4 127 aa10.48□□□□□ -0.73
MBD1-217ENST00000588937 ANKRD29Q8N6D5 301 aa10.47□□□□□ -0.73
MBD1-217ENST00000588937 C11orf68Q9H3H3 251 aaKnown RBP10.47□□□□□ -0.73
MBD1-217ENST00000588937 SND1-IT1Q9HBX3 110 aa10.47□□□□□ -0.73
MBD1-217ENST00000588937 LST1O00453 97 aa10.47□□□□□ -0.73
MBD1-217ENST00000588937 CRPP02741 224 aa10.46□□□□□ -0.74
MBD1-217ENST00000588937 MALP21145 153 aa10.46□□□□□ -0.74
MBD1-217ENST00000588937 CKS1BP61024 79 aa10.46□□□□□ -0.74
MBD1-217ENST00000588937 CFAP161Q6P656 301 aa10.46□□□□□ -0.74
MBD1-217ENST00000588937 NBEAL2Q6ZNJ1 2754 aa10.46□□□□□ -0.74
MBD1-217ENST00000588937 PFN2P35080 140 aa10.44□□□□□ -0.74
MBD1-217ENST00000588937 LYPD5Q6UWN5 251 aa10.44□□□□□ -0.74
MBD1-217ENST00000588937 RETNQ9HD89 108 aa10.44□□□□□ -0.74
MBD1-217ENST00000588937 H3BT86 120 aa10.44□□□□□ -0.74
MBD1-217ENST00000588937 CLEC2BQ92478 149 aa10.44□□□□□ -0.74
MBD1-217ENST00000588937 IGLV10-54A0A075B6I4 117 aa10.43□□□□□ -0.74
MBD1-217ENST00000588937 PCP4P48539 62 aa10.43□□□□□ -0.74
MBD1-217ENST00000588937 CCL18P55774 89 aa10.43□□□□□ -0.74
MBD1-217ENST00000588937 COX17Q14061 63 aa10.43□□□□□ -0.74
MBD1-217ENST00000588937 GAGE12HA6NDE8 117 aa10.42□□□□□ -0.74
MBD1-217ENST00000588937 Q8N3U1 123 aa10.42□□□□□ -0.74
MBD1-217ENST00000588937 SPATA25Q9BR10 227 aa10.42□□□□□ -0.74
MBD1-217ENST00000588937 PRR34Q9NV39 138 aa10.42□□□□□ -0.74
MBD1-217ENST00000588937 DNHD1Q96M86 4753 aa10.42□□□□□ -0.74
MBD1-217ENST00000588937 KIAA0087Q14695 138 aa10.42□□□□□ -0.74
MBD1-217ENST00000588937 KPRPQ5T749 579 aaPredicted RBP10.42□□□□□ -0.74
MBD1-217ENST00000588937 C2orf82Q6UX34 121 aa10.42□□□□□ -0.74
MBD1-217ENST00000588937 CARD19Q96LW7 228 aa10.42□□□□□ -0.74
MBD1-217ENST00000588937 RPL28P46779 137 aaKnown RBP10.41□□□□□ -0.74
MBD1-217ENST00000588937 IGKV2-28A0A075B6P5 120 aa10.4□□□□□ -0.74
MBD1-217ENST00000588937 IGKV2D-28P01615 120 aa10.4□□□□□ -0.74
MBD1-217ENST00000588937 KLK12Q9UKR0 248 aa10.4□□□□□ -0.74
MBD1-217ENST00000588937 KLK5Q9Y337 293 aaPredicted RBP10.4□□□□□ -0.74
MBD1-217ENST00000588937 Q6ZTC4 211 aa10.39□□□□□ -0.75
MBD1-217ENST00000588937 TRAV8-4A0A0B4J246 113 aa10.39□□□□□ -0.75
MBD1-217ENST00000588937 LINC00337Q8N6G1 96 aa10.39□□□□□ -0.75
MBD1-217ENST00000588937 NTN5Q8WTR8 489 aaPredicted RBP10.39□□□□□ -0.75
MBD1-217ENST00000588937 SIGMAR1Q99720 223 aa10.39□□□□□ -0.75
MBD1-217ENST00000588937 TRACP01848 142 aa10.38□□□□□ -0.75
MBD1-217ENST00000588937 MUC7Q8TAX7 377 aa10.37□□□□□ -0.75
MBD1-217ENST00000588937 UBE2WQ96B02 151 aa10.37□□□□□ -0.75
MBD1-217ENST00000588937 A0A0J9YWU9 116 aa10.37□□□□□ -0.75
MBD1-217ENST00000588937 ENHOQ6UWT2 76 aa10.37□□□□□ -0.75
MBD1-217ENST00000588937 SPAG11BQ08648 103 aa10.36□□□□□ -0.75
MBD1-217ENST00000588937 C11orf45Q8TAV5 145 aa10.36□□□□□ -0.75
MBD1-217ENST00000588937 NBEAL1Q6ZS30 2694 aa10.36□□□□□ -0.75
MBD1-217ENST00000588937 H0YGX0 51 aa10.34□□□□□ -0.75
MBD1-217ENST00000588937 NDUFC2O95298 119 aa10.34□□□□□ -0.75
MBD1-217ENST00000588937 NOTCH1P46531 2555 aa10.34□□□□□ -0.75
MBD1-217ENST00000588937 DEFB131BA0A096LNP1 70 aa10.34□□□□□ -0.75
MBD1-217ENST00000588937 SMIM11BQ8TCY0 68 aa10.34□□□□□ -0.75
MBD1-217ENST00000588937 MGAM2Q2M2H8 2515 aa10.33□□□□□ -0.76
MBD1-217ENST00000588937 OR13C6PQ8NH95 151 aa10.33□□□□□ -0.76
MBD1-217ENST00000588937 NANOS2P60321 138 aaKnown RBP10.32□□□□□ -0.76
MBD1-217ENST00000588937 WFDC10BQ8IUB3 73 aa10.32□□□□□ -0.76
MBD1-217ENST00000588937 TEX49A0A1B0GTD5 131 aa10.31□□□□□ -0.76
MBD1-217ENST00000588937 CDIP1Q9H305 208 aa10.31□□□□□ -0.76
MBD1-217ENST00000588937 SCGB1A1P11684 91 aa10.3□□□□□ -0.76
MBD1-217ENST00000588937 ESRGQ1W209 222 aa10.3□□□□□ -0.76
MBD1-217ENST00000588937 GVQW2A0A096LPI5 108 aaPredicted RBP10.29□□□□□ -0.76
MBD1-217ENST00000588937 DEFB121Q5J5C9 76 aa10.29□□□□□ -0.76
MBD1-217ENST00000588937 UNQ6190/PRO20217Q6UXQ8 127 aa10.29□□□□□ -0.76
MBD1-217ENST00000588937 FAM218AQ96MZ4 157 aa10.29□□□□□ -0.76
MBD1-217ENST00000588937 DNAL4O96015 105 aa10.28□□□□□ -0.76
MBD1-217ENST00000588937 C9orf116Q5BN46 136 aaPredicted RBP10.28□□□□□ -0.76
MBD1-217ENST00000588937 C6orf223Q8N319 242 aa10.28□□□□□ -0.76
MBD1-217ENST00000588937 BAALC-AS2P0C853 105 aa10.27□□□□□ -0.77
MBD1-217ENST00000588937 C21orf62-AS1Q17RA5 79 aa10.27□□□□□ -0.77
MBD1-217ENST00000588937 LINC01556Q5JQF7 62 aa10.27□□□□□ -0.77
MBD1-217ENST00000588937 TMEM126AQ9H061 195 aa10.27□□□□□ -0.77
MBD1-217ENST00000588937 TRAV10A0A0B4J240 114 aa10.26□□□□□ -0.77
MBD1-217ENST00000588937 C10orf25Q5T742 122 aa10.26□□□□□ -0.77
MBD1-217ENST00000588937 TM2D3Q9BRN9 247 aa10.26□□□□□ -0.77
MBD1-217ENST00000588937 C15orf53Q8NAA6 179 aa10.26□□□□□ -0.77
MBD1-217ENST00000588937 ZNF561-AS1K7EIQ3 104 aa10.25□□□□□ -0.77
MBD1-217ENST00000588937 K7EIL1 84 aa10.24□□□□□ -0.77
MBD1-217ENST00000588937 C1orf43Q9BWL3 253 aa10.24□□□□□ -0.77
MBD1-217ENST00000588937 A0A087WYN8 130 aa10.23□□□□□ -0.77
MBD1-217ENST00000588937 FAM240AA0A1B0GVK7 77 aa10.23□□□□□ -0.77
MBD1-217ENST00000588937 A0A1B0GX51 115 aa10.23□□□□□ -0.77
MBD1-217ENST00000588937 KRTAP26-1Q6PEX3 210 aa10.23□□□□□ -0.77
MBD1-217ENST00000588937 LINC00526Q96FQ7 95 aa10.23□□□□□ -0.77
MBD1-217ENST00000588937 PRR3P79522 188 aaKnown RBP10.22□□□□□ -0.77
MBD1-217ENST00000588937 S100A7L2Q5SY68 101 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms