RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 CKS1BP61024 79 aa11.02□□□□□ -0.65
PRKCSH-203ENST00000586486 STPG4Q8N801 248 aa11.02□□□□□ -0.65
PRKCSH-203ENST00000586486 IGLV5-52A0A0A0MRZ9 124 aa11.01□□□□□ -0.65
PRKCSH-203ENST00000586486 C4orf48Q5BLP8 95 aa11.01□□□□□ -0.65
PRKCSH-203ENST00000586486 PLEKHB2Q96CS7 222 aa11.01□□□□□ -0.65
PRKCSH-203ENST00000586486 CARD19Q96LW7 228 aa11.01□□□□□ -0.65
PRKCSH-203ENST00000586486 HECTD4Q9Y4D8 3996 aa11.01□□□□□ -0.65
PRKCSH-203ENST00000586486 SFTA2Q6UW10 78 aa11□□□□□ -0.65
PRKCSH-203ENST00000586486 C2orf82Q6UX34 121 aa11□□□□□ -0.65
PRKCSH-203ENST00000586486 Q6ZRU5 148 aa11□□□□□ -0.65
PRKCSH-203ENST00000586486 C9orf163Q8N9P6 203 aa10.99□□□□□ -0.65
PRKCSH-203ENST00000586486 TRBV30A0A0K0K1B3 111 aa10.98□□□□□ -0.65
PRKCSH-203ENST00000586486 RNF151Q2KHN1 245 aa10.98□□□□□ -0.65
PRKCSH-203ENST00000586486 C10orf25Q5T742 122 aa10.98□□□□□ -0.65
PRKCSH-203ENST00000586486 UNQ6190/PRO20217Q6UXQ8 127 aa10.98□□□□□ -0.65
PRKCSH-203ENST00000586486 J3QQQ9 107 aa10.98□□□□□ -0.65
PRKCSH-203ENST00000586486 TSPEAR-AS2P59090 65 aa10.98□□□□□ -0.65
PRKCSH-203ENST00000586486 PYY3Q5JQD4 70 aa10.98□□□□□ -0.65
PRKCSH-203ENST00000586486 ZNF625Q96I27 306 aaPredicted RBP10.98□□□□□ -0.65
PRKCSH-203ENST00000586486 FUSP35637 526 aaKnown RBP eCLIP10.97□□□□□ -0.65
PRKCSH-203ENST00000586486 C6orf48Q9UBA6 75 aa10.97□□□□□ -0.65
PRKCSH-203ENST00000586486 ANKRD39Q53RE8 183 aa10.96□□□□□ -0.65
PRKCSH-203ENST00000586486 DNAH5Q8TE73 4624 aa10.95□□□□□ -0.66
PRKCSH-203ENST00000586486 IGKV2D-26A0A0A0MRZ7 120 aa10.95□□□□□ -0.66
PRKCSH-203ENST00000586486 HSBP1L1C9JCN9 74 aa10.95□□□□□ -0.66
PRKCSH-203ENST00000586486 LGALS3P17931 250 aaKnown RBP10.95□□□□□ -0.66
PRKCSH-203ENST00000586486 NMUP48645 174 aa10.95□□□□□ -0.66
PRKCSH-203ENST00000586486 MAJINQ3KP22 176 aa10.95□□□□□ -0.66
PRKCSH-203ENST00000586486 NDUFA12Q9UI09 145 aa10.95□□□□□ -0.66
PRKCSH-203ENST00000586486 PKIGQ9Y2B9 76 aa10.95□□□□□ -0.66
PRKCSH-203ENST00000586486 GCSHP23434 173 aa10.93□□□□□ -0.66
PRKCSH-203ENST00000586486 HERV-K104P63124 156 aa10.93□□□□□ -0.66
PRKCSH-203ENST00000586486 PKHD1P08F94 4074 aa10.93□□□□□ -0.66
PRKCSH-203ENST00000586486 MYMXA0A1B0GTQ4 84 aa10.92□□□□□ -0.66
PRKCSH-203ENST00000586486 LOC105371267A0A1B0GV96 52 aa10.92□□□□□ -0.66
PRKCSH-203ENST00000586486 TLX1NBP0CAT3 122 aa10.92□□□□□ -0.66
PRKCSH-203ENST00000586486 LINC01620Q4KN68 170 aa10.92□□□□□ -0.66
PRKCSH-203ENST00000586486 SDIM1Q6ZPB5 146 aa10.91□□□□□ -0.66
PRKCSH-203ENST00000586486 C16orf90A8MZG2 172 aa10.91□□□□□ -0.66
PRKCSH-203ENST00000586486 C9orf116Q5BN46 136 aaPredicted RBP10.91□□□□□ -0.66
PRKCSH-203ENST00000586486 LOC107984640A0A0U1RRK4 108 aa10.9□□□□□ -0.66
PRKCSH-203ENST00000586486 NDUFC2-KCTD14E9PQ53 114 aa10.9□□□□□ -0.66
PRKCSH-203ENST00000586486 VAMP8Q9BV40 100 aa10.9□□□□□ -0.66
PRKCSH-203ENST00000586486 COX17Q14061 63 aa10.89□□□□□ -0.67
PRKCSH-203ENST00000586486 ERG28Q9UKR5 140 aa10.89□□□□□ -0.67
PRKCSH-203ENST00000586486 ZNF815PA8K554 130 aa10.87□□□□□ -0.67
PRKCSH-203ENST00000586486 KRTAP10-1P60331 282 aa10.87□□□□□ -0.67
PRKCSH-203ENST00000586486 TTTY13Q9BZ97 58 aa10.87□□□□□ -0.67
PRKCSH-203ENST00000586486 LINC00587B1AMM8 73 aa10.87□□□□□ -0.67
PRKCSH-203ENST00000586486 Q6ZRP5 223 aa10.87□□□□□ -0.67
PRKCSH-203ENST00000586486 PCP2Q8IVA1 136 aa10.87□□□□□ -0.67
PRKCSH-203ENST00000586486 PAM16Q9Y3D7 125 aa10.87□□□□□ -0.67
PRKCSH-203ENST00000586486 SMIM6P0DI80 62 aa10.86□□□□□ -0.67
PRKCSH-203ENST00000586486 RPL18AQ02543 176 aaKnown RBP10.86□□□□□ -0.67
PRKCSH-203ENST00000586486 SPATA45Q537H7 98 aa10.86□□□□□ -0.67
PRKCSH-203ENST00000586486 A0A096LNI7 61 aa10.85□□□□□ -0.67
PRKCSH-203ENST00000586486 A0A0J9YXY3 114 aa10.85□□□□□ -0.67
PRKCSH-203ENST00000586486 PTTG1IPP53801 180 aa10.85□□□□□ -0.67
PRKCSH-203ENST00000586486 Q6ZSA8 131 aa10.85□□□□□ -0.67
PRKCSH-203ENST00000586486 PFN2P35080 140 aa10.84□□□□□ -0.67
PRKCSH-203ENST00000586486 CIRBPQ14011 172 aaKnown RBP10.84□□□□□ -0.67
PRKCSH-203ENST00000586486 MEIG1Q5JSS6 88 aa10.84□□□□□ -0.67
PRKCSH-203ENST00000586486 LINC00474Q9P2X8 69 aa10.84□□□□□ -0.67
PRKCSH-203ENST00000586486 DYNC1H1Q14204 4646 aaKnown RBP10.84□□□□□ -0.67
PRKCSH-203ENST00000586486 LRP1BQ9NZR2 4599 aa10.83□□□□□ -0.68
PRKCSH-203ENST00000586486 EPPK1P58107 5090 aaKnown RBP10.83□□□□□ -0.68
PRKCSH-203ENST00000586486 COX8AP10176 69 aa10.83□□□□□ -0.68
PRKCSH-203ENST00000586486 GAGE2BQ13066 116 aa10.83□□□□□ -0.68
PRKCSH-203ENST00000586486 TIMM17BO60830 172 aa10.82□□□□□ -0.68
PRKCSH-203ENST00000586486 SMIM13P0DJ93 91 aa10.82□□□□□ -0.68
PRKCSH-203ENST00000586486 SPACA4Q8TDM5 124 aa10.82□□□□□ -0.68
PRKCSH-203ENST00000586486 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.82□□□□□ -0.68
PRKCSH-203ENST00000586486 IGKV2-24A0A0C4DH68 120 aa10.81□□□□□ -0.68
PRKCSH-203ENST00000586486 CHTF8P0CG12 524 aa10.81□□□□□ -0.68
PRKCSH-203ENST00000586486 LINC00158P58513 81 aa10.81□□□□□ -0.68
PRKCSH-203ENST00000586486 S100A12P80511 92 aa10.81□□□□□ -0.68
PRKCSH-203ENST00000586486 GAGE2EQ4V326 116 aa10.81□□□□□ -0.68
PRKCSH-203ENST00000586486 BOD1L2Q8IYS8 172 aa10.81□□□□□ -0.68
PRKCSH-203ENST00000586486 GAGE2DQ9UEU5 116 aa10.81□□□□□ -0.68
PRKCSH-203ENST00000586486 PANO1I0J062 215 aa10.8□□□□□ -0.68
PRKCSH-203ENST00000586486 DLEU1O43261 78 aa10.8□□□□□ -0.68
PRKCSH-203ENST00000586486 SCGB1D4Q6XE38 83 aa10.8□□□□□ -0.68
PRKCSH-203ENST00000586486 LITAFQ99732 161 aa10.8□□□□□ -0.68
PRKCSH-203ENST00000586486 FAM30AQ9NZY2 134 aa10.8□□□□□ -0.68
PRKCSH-203ENST00000586486 DNAH8Q96JB1 4490 aa10.79□□□□□ -0.68
PRKCSH-203ENST00000586486 A0A0U1RRA0 63 aa10.79□□□□□ -0.68
PRKCSH-203ENST00000586486 C9orf129Q5T035 196 aaKnown RBP10.79□□□□□ -0.68
PRKCSH-203ENST00000586486 SND1-IT1Q9HBX3 110 aa10.79□□□□□ -0.68
PRKCSH-203ENST00000586486 MIR7-3HGQ8N6C7 128 aa10.78□□□□□ -0.68
PRKCSH-203ENST00000586486 C14orf144Q96I85 54 aa10.78□□□□□ -0.68
PRKCSH-203ENST00000586486 XAGE1AQ9HD64 81 aa10.78□□□□□ -0.68
PRKCSH-203ENST00000586486 TMEM238C9JI98 176 aa10.76□□□□□ -0.69
PRKCSH-203ENST00000586486 ADAMTSL4-AS1Q5T5F5 129 aa10.76□□□□□ -0.69
PRKCSH-203ENST00000586486 SLC25A34Q6PIV7 304 aa10.76□□□□□ -0.69
PRKCSH-203ENST00000586486 TP73-AS1Q9UF72 201 aa10.76□□□□□ -0.69
PRKCSH-203ENST00000586486 DAND5Q8N907 189 aa10.75□□□□□ -0.69
PRKCSH-203ENST00000586486 LOC107984156A0A0G2JMH3 177 aa10.74□□□□□ -0.69
PRKCSH-203ENST00000586486 EPM2AB3EWF7 344 aa10.74□□□□□ -0.69
PRKCSH-203ENST00000586486 ARL17AQ8IVW1 177 aa10.74□□□□□ -0.69
PRKCSH-203ENST00000586486 SPANXDQ9BXN6 97 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms