RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 NAV3Q8IVL0 2385 aa4.03□□□□□ -1.76
SMAD4-203ENST00000585448 IGHV4-30-2A0A087WSY4 118 aa4.03□□□□□ -1.76
SMAD4-203ENST00000585448 ATP6V0E1O15342 81 aa4.03□□□□□ -1.76
SMAD4-203ENST00000585448 MINOS1Q5TGZ0 78 aa4.03□□□□□ -1.76
SMAD4-203ENST00000585448 RETNLBQ9BQ08 111 aa4.03□□□□□ -1.76
SMAD4-203ENST00000585448 KCNQ1DNQ9H478 68 aa4.03□□□□□ -1.76
SMAD4-203ENST00000585448 ZNF706Q9Y5V0 76 aaPredicted RBP4.03□□□□□ -1.76
SMAD4-203ENST00000585448 PRRC2BQ5JSZ5 2229 aaKnown RBP4.02□□□□□ -1.77
SMAD4-203ENST00000585448 SDK2Q58EX2 2172 aa4.02□□□□□ -1.77
SMAD4-203ENST00000585448 PRR14LQ5THK1 2151 aa4.02□□□□□ -1.77
SMAD4-203ENST00000585448 DOCK10Q96BY6 2186 aa4.02□□□□□ -1.77
SMAD4-203ENST00000585448 CNBPP62633 177 aaKnown RBP4.02□□□□□ -1.77
SMAD4-203ENST00000585448 COX17Q14061 63 aa4.02□□□□□ -1.77
SMAD4-203ENST00000585448 HIGD2BQ4VC39 106 aa4.02□□□□□ -1.77
SMAD4-203ENST00000585448 SPINK14Q6IE38 97 aa4.02□□□□□ -1.77
SMAD4-203ENST00000585448 IGHV3OR16-8A0A075B7F1 116 aa4.01□□□□□ -1.77
SMAD4-203ENST00000585448 ODF3BA8MYP8 253 aa4.01□□□□□ -1.77
SMAD4-203ENST00000585448 IGHV4-59P01825 116 aa4.01□□□□□ -1.77
SMAD4-203ENST00000585448 LMO4P61968 165 aa4.01□□□□□ -1.77
SMAD4-203ENST00000585448 ARRDC1-AS1Q9H2J1 176 aa4.01□□□□□ -1.77
SMAD4-203ENST00000585448 IGHV3OR16-13A0A075B7E8 117 aa4□□□□□ -1.77
SMAD4-203ENST00000585448 IGHV3-74A0A0B4J1X5 117 aa4□□□□□ -1.77
SMAD4-203ENST00000585448 SPAG11BQ08648 103 aa4□□□□□ -1.77
SMAD4-203ENST00000585448 PRAC1Q96KF2 57 aa4□□□□□ -1.77
SMAD4-203ENST00000585448 TOMM7Q9P0U1 55 aa4□□□□□ -1.77
SMAD4-203ENST00000585448 SVILO95425 2214 aa4□□□□□ -1.77
SMAD4-203ENST00000585448 MUC4Q99102 2169 aa4□□□□□ -1.77
SMAD4-203ENST00000585448 PDE4DIPQ5VU43 2346 aa3.99□□□□□ -1.77
SMAD4-203ENST00000585448 SEC16AO15027 2179 aa3.99□□□□□ -1.77
SMAD4-203ENST00000585448 MED13Q9UHV7 2174 aa3.99□□□□□ -1.77
SMAD4-203ENST00000585448 COX7A1P24310 79 aa3.99□□□□□ -1.77
SMAD4-203ENST00000585448 PRB3Q04118 309 aaPredicted RBP3.99□□□□□ -1.77
SMAD4-203ENST00000585448 LYPD2Q6UXB3 125 aa3.99□□□□□ -1.77
SMAD4-203ENST00000585448 Q6ZQY7 126 aa3.99□□□□□ -1.77
SMAD4-203ENST00000585448 LINC00612Q8N6U2 182 aa3.99□□□□□ -1.77
SMAD4-203ENST00000585448 CNEP1R1Q8N9A8 125 aa3.99□□□□□ -1.77
SMAD4-203ENST00000585448 BRWD1Q9NSI6 2320 aa3.98□□□□□ -1.77
SMAD4-203ENST00000585448 PRR4Q16378 134 aa3.98□□□□□ -1.77
SMAD4-203ENST00000585448 Q8IZM0 81 aa3.98□□□□□ -1.77
SMAD4-203ENST00000585448 Q8N9L7 120 aa3.98□□□□□ -1.77
SMAD4-203ENST00000585448 PLXNB1O43157 2135 aa3.98□□□□□ -1.77
SMAD4-203ENST00000585448 IGLV1-51P01701 117 aa3.97□□□□□ -1.77
SMAD4-203ENST00000585448 COA5Q86WW8 74 aa3.97□□□□□ -1.77
SMAD4-203ENST00000585448 MINOS1-NBL1R4GNA1 71 aa3.97□□□□□ -1.77
SMAD4-203ENST00000585448 IGHV4-61A0A0C4DH41 118 aa3.96□□□□□ -1.78
SMAD4-203ENST00000585448 RTL8CO15255 209 aa3.96□□□□□ -1.78
SMAD4-203ENST00000585448 PRB1P04280 392 aa3.96□□□□□ -1.78
SMAD4-203ENST00000585448 CADP27708 2225 aa3.96□□□□□ -1.78
SMAD4-203ENST00000585448 IGLV7-46A0A075B6I9 117 aa3.95□□□□□ -1.78
SMAD4-203ENST00000585448 H3BUA1 57 aa3.95□□□□□ -1.78
SMAD4-203ENST00000585448 KRTAP10-7P60409 375 aaPredicted RBP3.95□□□□□ -1.78
SMAD4-203ENST00000585448 Q8N9W7 124 aa3.95□□□□□ -1.78
SMAD4-203ENST00000585448 Q8NAQ8 132 aa3.95□□□□□ -1.78
SMAD4-203ENST00000585448 ST20-AS1Q8NBB2 130 aa3.95□□□□□ -1.78
SMAD4-203ENST00000585448 USMG5Q96IX5 58 aa3.95□□□□□ -1.78
SMAD4-203ENST00000585448 RHPN1-AS1Q9BWJ2 59 aa3.95□□□□□ -1.78
SMAD4-203ENST00000585448 ZNF702PQ9H963 129 aa3.95□□□□□ -1.78
SMAD4-203ENST00000585448 XAGE1AQ9HD64 81 aa3.95□□□□□ -1.78
SMAD4-203ENST00000585448 F5P12259 2224 aa3.95□□□□□ -1.78
SMAD4-203ENST00000585448 IGLV9-49A0A0B4J1Y8 123 aa3.94□□□□□ -1.78
SMAD4-203ENST00000585448 B4DSR2 109 aa3.94□□□□□ -1.78
SMAD4-203ENST00000585448 H0Y9P7 68 aa3.94□□□□□ -1.78
SMAD4-203ENST00000585448 IGLV6-57P01721 117 aa3.94□□□□□ -1.78
SMAD4-203ENST00000585448 IGHV3-11P01762 117 aa3.94□□□□□ -1.78
SMAD4-203ENST00000585448 SPINK7P58062 85 aa3.94□□□□□ -1.78
SMAD4-203ENST00000585448 SPAG11AQ6PDA7 123 aa3.94□□□□□ -1.78
SMAD4-203ENST00000585448 C9orf163Q8N9P6 203 aa3.94□□□□□ -1.78
SMAD4-203ENST00000585448 FAM215AQ9Y5M1 114 aa3.94□□□□□ -1.78
SMAD4-203ENST00000585448 ASCC3Q8N3C0 2202 aaKnown RBP3.93□□□□□ -1.78
SMAD4-203ENST00000585448 TRGV4A0A0C4DH28 118 aa3.93□□□□□ -1.78
SMAD4-203ENST00000585448 A0A1W2PNM2 257 aa3.93□□□□□ -1.78
SMAD4-203ENST00000585448 DEFB1P60022 68 aa3.93□□□□□ -1.78
SMAD4-203ENST00000585448 DEFB112Q30KQ8 113 aa3.93□□□□□ -1.78
SMAD4-203ENST00000585448 KLK12Q9UKR0 248 aa3.92□□□□□ -1.78
SMAD4-203ENST00000585448 PRB2P02812 416 aaPredicted RBP3.91□□□□□ -1.78
SMAD4-203ENST00000585448 SPINK13Q1W4C9 94 aa3.91□□□□□ -1.78
SMAD4-203ENST00000585448 KPRPQ5T749 579 aaPredicted RBP3.91□□□□□ -1.78
SMAD4-203ENST00000585448 C1orf134Q5TEV5 83 aa3.91□□□□□ -1.78
SMAD4-203ENST00000585448 CNTRLQ7Z7A1 2325 aa3.9□□□□□ -1.78
SMAD4-203ENST00000585448 IGLV5-48A0A075B6I7 105 aa3.9□□□□□ -1.79
SMAD4-203ENST00000585448 A8MTW9 85 aa3.9□□□□□ -1.79
SMAD4-203ENST00000585448 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
SMAD4-203ENST00000585448 ADM2Q7Z4H4 148 aa3.9□□□□□ -1.79
SMAD4-203ENST00000585448 DEFB119Q8N690 84 aa3.9□□□□□ -1.79
SMAD4-203ENST00000585448 U3KQA8 63 aa3.9□□□□□ -1.79
SMAD4-203ENST00000585448 CCL5P13501 91 aa3.89□□□□□ -1.79
SMAD4-203ENST00000585448 DSCR10P59022 87 aa3.89□□□□□ -1.79
SMAD4-203ENST00000585448 ROMO1P60602 79 aa3.89□□□□□ -1.79
SMAD4-203ENST00000585448 SPATA8Q6RVD6 105 aa3.89□□□□□ -1.79
SMAD4-203ENST00000585448 A0A0C4DFX4 3053 aa3.89□□□□□ -1.79
SMAD4-203ENST00000585448 IGKV2D-24A0A075B6R9 120 aa3.88□□□□□ -1.79
SMAD4-203ENST00000585448 LINC00959A0A1B0GUT2 108 aa3.88□□□□□ -1.79
SMAD4-203ENST00000585448 G3V318 75 aa3.88□□□□□ -1.79
SMAD4-203ENST00000585448 C11orf71Q6IPW1 123 aa3.88□□□□□ -1.79
SMAD4-203ENST00000585448 CSAG1Q6PB30 78 aa3.88□□□□□ -1.79
SMAD4-203ENST00000585448 CHCHD10Q8WYQ3 142 aaPredicted RBP3.88□□□□□ -1.79
SMAD4-203ENST00000585448 SPRR4Q96PI1 79 aa3.88□□□□□ -1.79
SMAD4-203ENST00000585448 IGKV3-7A0A075B6H7 116 aa3.87□□□□□ -1.79
SMAD4-203ENST00000585448 Q8NBF4 154 aa3.87□□□□□ -1.79
SMAD4-203ENST00000585448 DNAJC13O75165 2243 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms