RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 RPL37AP8A6NKH3 93 aa6.77□□□□□ -1.33
CTDNEP1-212ENST00000576613 NPSP0C0P6 89 aa6.77□□□□□ -1.33
CTDNEP1-212ENST00000576613 CXCL5P42830 114 aa6.77□□□□□ -1.33
CTDNEP1-212ENST00000576613 UBE2AP49459 152 aa6.77□□□□□ -1.33
CTDNEP1-212ENST00000576613 SEC11AP67812 179 aa6.77□□□□□ -1.33
CTDNEP1-212ENST00000576613 KRTAP13-2Q52LG2 175 aa6.77□□□□□ -1.33
CTDNEP1-212ENST00000576613 LINC00173Q6ZV60 143 aa6.77□□□□□ -1.33
CTDNEP1-212ENST00000576613 AMELXQ99217 191 aa6.77□□□□□ -1.33
CTDNEP1-212ENST00000576613 ANAPC11Q9NYG5 84 aa6.77□□□□□ -1.33
CTDNEP1-212ENST00000576613 IGKV2D-26A0A0A0MRZ7 120 aa6.76□□□□□ -1.33
CTDNEP1-212ENST00000576613 HERVK_113P63121 156 aa6.76□□□□□ -1.33
CTDNEP1-212ENST00000576613 CTAG1AP78358 180 aa6.76□□□□□ -1.33
CTDNEP1-212ENST00000576613 ZC2HC1BQ5TFG8 222 aa6.76□□□□□ -1.33
CTDNEP1-212ENST00000576613 C2orf66Q6UXQ4 117 aa6.76□□□□□ -1.33
CTDNEP1-212ENST00000576613 LINC00167Q96N53 147 aa6.76□□□□□ -1.33
CTDNEP1-212ENST00000576613 MAP1LC3AQ9H492 121 aa6.76□□□□□ -1.33
CTDNEP1-212ENST00000576613 LAMTOR2Q9Y2Q5 125 aa6.76□□□□□ -1.33
CTDNEP1-212ENST00000576613 LOC389332A0A1B0GUA5 103 aa6.75□□□□□ -1.33
CTDNEP1-212ENST00000576613 PRSS47A8MTI9 375 aa6.75□□□□□ -1.33
CTDNEP1-212ENST00000576613 PAPPA-AS1Q5QFB9 102 aa6.75□□□□□ -1.33
CTDNEP1-212ENST00000576613 ATP5L2Q7Z4Y8 100 aa6.75□□□□□ -1.33
CTDNEP1-212ENST00000576613 FAM19A3Q7Z5A8 133 aa6.75□□□□□ -1.33
CTDNEP1-212ENST00000576613 AKAP14Q86UN6 197 aa6.75□□□□□ -1.33
CTDNEP1-212ENST00000576613 GEMIN7Q9H840 131 aaKnown RBP6.75□□□□□ -1.33
CTDNEP1-212ENST00000576613 GAGE10A6NGK3 116 aa6.74□□□□□ -1.33
CTDNEP1-212ENST00000576613 ORMDL2Q53FV1 153 aa6.74□□□□□ -1.33
CTDNEP1-212ENST00000576613 KRTAP13-1Q8IUC0 172 aa6.74□□□□□ -1.33
CTDNEP1-212ENST00000576613 NKAPP1Q8N9T2 125 aa6.74□□□□□ -1.33
CTDNEP1-212ENST00000576613 CDKN2A-AS1Q9UH64 79 aa6.74□□□□□ -1.33
CTDNEP1-212ENST00000576613 K7EMI3 77 aa6.73□□□□□ -1.33
CTDNEP1-212ENST00000576613 Q8N8P6 123 aa6.73□□□□□ -1.33
CTDNEP1-212ENST00000576613 MUC17Q685J3 4493 aa6.73□□□□□ -1.33
CTDNEP1-212ENST00000576613 IGLV5-37A0A075B6J1 123 aa6.72□□□□□ -1.33
CTDNEP1-212ENST00000576613 IGIPA6NJ69 53 aa6.72□□□□□ -1.33
CTDNEP1-212ENST00000576613 PNRC1Q12796 327 aaPredicted RBP6.72□□□□□ -1.33
CTDNEP1-212ENST00000576613 C9JQL5 133 aa6.71□□□□□ -1.34
CTDNEP1-212ENST00000576613 G0S2P27469 103 aa6.71□□□□□ -1.34
CTDNEP1-212ENST00000576613 PEA15Q15121 130 aa6.71□□□□□ -1.34
CTDNEP1-212ENST00000576613 PPDPFQ9H3Y8 114 aa6.71□□□□□ -1.34
CTDNEP1-212ENST00000576613 IGKV2-28A0A075B6P5 120 aa6.7□□□□□ -1.34
CTDNEP1-212ENST00000576613 IGKV2D-28P01615 120 aa6.7□□□□□ -1.34
CTDNEP1-212ENST00000576613 COX7B2Q8TF08 81 aa6.7□□□□□ -1.34
CTDNEP1-212ENST00000576613 SMIM1B2RUZ4 78 aa6.69□□□□□ -1.34
CTDNEP1-212ENST00000576613 PDZD11Q5EBL8 140 aa6.69□□□□□ -1.34
CTDNEP1-212ENST00000576613 TIMM17AQ99595 171 aa6.69□□□□□ -1.34
CTDNEP1-212ENST00000576613 NXT2Q9NPJ8 142 aaKnown RBP6.69□□□□□ -1.34
CTDNEP1-212ENST00000576613 LINC01547P58512 204 aaPredicted RBP6.68□□□□□ -1.34
CTDNEP1-212ENST00000576613 RAB5BP61020 215 aa6.68□□□□□ -1.34
CTDNEP1-212ENST00000576613 PRLHP81277 87 aa6.68□□□□□ -1.34
CTDNEP1-212ENST00000576613 SRSF3P84103 164 aaKnown RBP6.67□□□□□ -1.34
CTDNEP1-212ENST00000576613 SPAG11AQ6PDA7 123 aa6.67□□□□□ -1.34
CTDNEP1-212ENST00000576613 FP248Q71RG6 208 aaPredicted RBP6.67□□□□□ -1.34
CTDNEP1-212ENST00000576613 FAM19A1Q7Z5A9 133 aa6.67□□□□□ -1.34
CTDNEP1-212ENST00000576613 LINC00337Q8N6G1 96 aa6.67□□□□□ -1.34
CTDNEP1-212ENST00000576613 TINCRA0A1B0GVN0 87 aa6.66□□□□□ -1.34
CTDNEP1-212ENST00000576613 ATP5LO75964 103 aa6.66□□□□□ -1.34
CTDNEP1-212ENST00000576613 ERASQ7Z444 233 aa6.66□□□□□ -1.34
CTDNEP1-212ENST00000576613 TOMM6Q96B49 74 aa6.66□□□□□ -1.34
CTDNEP1-212ENST00000576613 TMEM126AQ9H061 195 aa6.66□□□□□ -1.34
CTDNEP1-212ENST00000576613 IGLV5-45A0A087WSX0 123 aa6.65□□□□□ -1.34
CTDNEP1-212ENST00000576613 SCO1O75880 301 aa6.65□□□□□ -1.34
CTDNEP1-212ENST00000576613 hCG_2014768A0A024R1R8 64 aa6.64□□□□□ -1.35
CTDNEP1-212ENST00000576613 TMEM238C9JI98 176 aa6.64□□□□□ -1.35
CTDNEP1-212ENST00000576613 ASB16-AS1Q495Z4 193 aa6.64□□□□□ -1.35
CTDNEP1-212ENST00000576613 C4orf48Q5BLP8 95 aa6.64□□□□□ -1.35
CTDNEP1-212ENST00000576613 LCE2DQ5TA82 110 aaPredicted RBP6.64□□□□□ -1.35
CTDNEP1-212ENST00000576613 CBLN2Q8IUK8 224 aa6.64□□□□□ -1.35
CTDNEP1-212ENST00000576613 C3orf22Q8N5N4 141 aa6.64□□□□□ -1.35
CTDNEP1-212ENST00000576613 PLEKHB2Q96CS7 222 aa6.64□□□□□ -1.35
CTDNEP1-212ENST00000576613 SCGB3A1Q96QR1 104 aa6.64□□□□□ -1.35
CTDNEP1-212ENST00000576613 GNB1LQ9BYB4 327 aa6.64□□□□□ -1.35
CTDNEP1-212ENST00000576613 SPINK8P0C7L1 97 aa6.63□□□□□ -1.35
CTDNEP1-212ENST00000576613 RPL24P83731 157 aaKnown RBP6.63□□□□□ -1.35
CTDNEP1-212ENST00000576613 LINC01549A6NIU2 74 aa6.62□□□□□ -1.35
CTDNEP1-212ENST00000576613 H3BRM9 83 aa6.62□□□□□ -1.35
CTDNEP1-212ENST00000576613 PFN2P35080 140 aa6.62□□□□□ -1.35
CTDNEP1-212ENST00000576613 HIGD2AQ9BW72 106 aa6.62□□□□□ -1.35
CTDNEP1-212ENST00000576613 MRPL18Q9H0U6 180 aaKnown RBP6.62□□□□□ -1.35
CTDNEP1-212ENST00000576613 M0R378 163 aa6.61□□□□□ -1.35
CTDNEP1-212ENST00000576613 MT-ND4LP03901 98 aa6.61□□□□□ -1.35
CTDNEP1-212ENST00000576613 VPREB1P12018 145 aa6.61□□□□□ -1.35
CTDNEP1-212ENST00000576613 SEC61BP60468 96 aaKnown RBP6.61□□□□□ -1.35
CTDNEP1-212ENST00000576613 KRTAP13-3Q3SY46 172 aa6.61□□□□□ -1.35
CTDNEP1-212ENST00000576613 ANAPC16Q96DE5 110 aa6.61□□□□□ -1.35
CTDNEP1-212ENST00000576613 ADCYAP1P18509 176 aa6.6□□□□□ -1.35
CTDNEP1-212ENST00000576613 CST9LQ9H4G1 147 aa6.6□□□□□ -1.35
CTDNEP1-212ENST00000576613 SND1-IT1Q9HBX3 110 aa6.6□□□□□ -1.35
CTDNEP1-212ENST00000576613 CRCT1Q9UGL9 99 aa6.6□□□□□ -1.35
CTDNEP1-212ENST00000576613 ZNF706Q9Y5V0 76 aaPredicted RBP6.6□□□□□ -1.35
CTDNEP1-212ENST00000576613 COX17Q14061 63 aa6.59□□□□□ -1.35
CTDNEP1-212ENST00000576613 PMVKQ15126 192 aa6.59□□□□□ -1.35
CTDNEP1-212ENST00000576613 SPRR4Q96PI1 79 aa6.59□□□□□ -1.35
CTDNEP1-212ENST00000576613 ERG28Q9UKR5 140 aa6.59□□□□□ -1.35
CTDNEP1-212ENST00000576613 RAB14P61106 215 aa6.58□□□□□ -1.36
CTDNEP1-212ENST00000576613 SPINK1P00995 79 aa6.57□□□□□ -1.36
CTDNEP1-212ENST00000576613 Q8NBF4 154 aa6.57□□□□□ -1.36
CTDNEP1-212ENST00000576613 NDUFA12Q9UI09 145 aa6.57□□□□□ -1.36
CTDNEP1-212ENST00000576613 IGLV5-39A0A0G2JS06 123 aa6.56□□□□□ -1.36
CTDNEP1-212ENST00000576613 SFTA2Q6UW10 78 aa6.56□□□□□ -1.36
CTDNEP1-212ENST00000576613 DAND5Q8N907 189 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms