RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 CXCL5P42830 114 aa19.64■□□□□ 0.73
CTDNEP1-208ENST00000573600 CFAP161Q6P656 301 aa19.63■□□□□ 0.73
CTDNEP1-208ENST00000573600 KLK5Q9Y337 293 aaPredicted RBP19.63■□□□□ 0.73
CTDNEP1-208ENST00000573600 DAND5Q8N907 189 aa19.62■□□□□ 0.73
CTDNEP1-208ENST00000573600 A0A0B4J2C4 111 aa19.62■□□□□ 0.73
CTDNEP1-208ENST00000573600 A0A1W2PPM0 123 aa19.62■□□□□ 0.73
CTDNEP1-208ENST00000573600 IBA57-AS1B1ANH7 110 aa19.62■□□□□ 0.73
CTDNEP1-208ENST00000573600 KIAA0087Q14695 138 aa19.62■□□□□ 0.73
CTDNEP1-208ENST00000573600 NAA38Q9BRA0 125 aaKnown RBP19.62■□□□□ 0.73
CTDNEP1-208ENST00000573600 A0A0U1RRA0 63 aa19.61■□□□□ 0.73
CTDNEP1-208ENST00000573600 LINC00308Q8TCZ7 52 aa19.61■□□□□ 0.73
CTDNEP1-208ENST00000573600 PPDPFQ9H3Y8 114 aa19.61■□□□□ 0.73
CTDNEP1-208ENST00000573600 CKS1BP61024 79 aa19.6■□□□□ 0.73
CTDNEP1-208ENST00000573600 NPC2P61916 151 aa19.6■□□□□ 0.73
CTDNEP1-208ENST00000573600 UPK3BQ9BT76 320 aa19.59■□□□□ 0.73
CTDNEP1-208ENST00000573600 PGPEP1Q9NXJ5 209 aa19.59■□□□□ 0.73
CTDNEP1-208ENST00000573600 PRO1854Q9UHT4 67 aa19.59■□□□□ 0.73
CTDNEP1-208ENST00000573600 FABP2P12104 132 aa19.58■□□□□ 0.72
CTDNEP1-208ENST00000573600 UBE2V1Q13404 147 aa19.58■□□□□ 0.72
CTDNEP1-208ENST00000573600 LINC00158P58513 81 aa19.55■□□□□ 0.72
CTDNEP1-208ENST00000573600 C1orf43Q9BWL3 253 aa19.55■□□□□ 0.72
CTDNEP1-208ENST00000573600 ERG28Q9UKR5 140 aa19.55■□□□□ 0.72
CTDNEP1-208ENST00000573600 KRTAP26-1Q6PEX3 210 aa19.54■□□□□ 0.72
CTDNEP1-208ENST00000573600 SPAG11BQ08648 103 aa19.54■□□□□ 0.72
CTDNEP1-208ENST00000573600 C2orf82Q6UX34 121 aa19.54■□□□□ 0.72
CTDNEP1-208ENST00000573600 TSPAN13O95857 204 aa19.53■□□□□ 0.72
CTDNEP1-208ENST00000573600 GTF2H5Q6ZYL4 71 aa19.53■□□□□ 0.72
CTDNEP1-208ENST00000573600 MIR7-3HGQ8N6C7 128 aa19.53■□□□□ 0.72
CTDNEP1-208ENST00000573600 GAGE10A6NGK3 116 aa19.52■□□□□ 0.72
CTDNEP1-208ENST00000573600 EIF4EBP3O60516 100 aaPredicted RBP19.52■□□□□ 0.72
CTDNEP1-208ENST00000573600 SOSTDC1Q6X4U4 206 aa19.51■□□□□ 0.71
CTDNEP1-208ENST00000573600 APLNQ9ULZ1 77 aa19.51■□□□□ 0.71
CTDNEP1-208ENST00000573600 K7EP34 96 aa19.5■□□□□ 0.71
CTDNEP1-208ENST00000573600 PFN2P35080 140 aa19.49■□□□□ 0.71
CTDNEP1-208ENST00000573600 SPCS1Q9Y6A9 102 aa19.49■□□□□ 0.71
CTDNEP1-208ENST00000573600 COX17Q14061 63 aa19.48■□□□□ 0.71
CTDNEP1-208ENST00000573600 IGKV2D-24A0A075B6R9 120 aa19.48■□□□□ 0.71
CTDNEP1-208ENST00000573600 NUPR2A6NF83 97 aa19.48■□□□□ 0.71
CTDNEP1-208ENST00000573600 COL7A1Q02388 2944 aa19.47■□□□□ 0.71
CTDNEP1-208ENST00000573600 LYRM7Q5U5X0 104 aa19.43■□□□□ 0.7
CTDNEP1-208ENST00000573600 STAB2Q8WWQ8 2551 aa19.43■□□□□ 0.7
CTDNEP1-208ENST00000573600 C6orf223Q8N319 242 aa19.42■□□□□ 0.7
CTDNEP1-208ENST00000573600 NTN5Q8WTR8 489 aaPredicted RBP19.42■□□□□ 0.7
CTDNEP1-208ENST00000573600 Q9HAA7 133 aa19.42■□□□□ 0.7
CTDNEP1-208ENST00000573600 RMI2Q96E14 147 aa19.42■□□□□ 0.7
CTDNEP1-208ENST00000573600 ZNF561-AS1K7EIQ3 104 aa19.41■□□□□ 0.7
CTDNEP1-208ENST00000573600 UBE2DNLQ8IWF7 75 aa19.4■□□□□ 0.7
CTDNEP1-208ENST00000573600 MUC7Q8TAX7 377 aa19.4■□□□□ 0.7
CTDNEP1-208ENST00000573600 Q1RN00 199 aa19.39■□□□□ 0.7
CTDNEP1-208ENST00000573600 UNQ6190/PRO20217Q6UXQ8 127 aa19.39■□□□□ 0.7
CTDNEP1-208ENST00000573600 GVQW2A0A096LPI5 108 aaPredicted RBP19.39■□□□□ 0.69
CTDNEP1-208ENST00000573600 LOC107984156A0A0G2JMH3 177 aa19.39■□□□□ 0.69
CTDNEP1-208ENST00000573600 ARL17AQ8IVW1 177 aa19.39■□□□□ 0.69
CTDNEP1-208ENST00000573600 SND1-IT1Q9HBX3 110 aa19.39■□□□□ 0.69
CTDNEP1-208ENST00000573600 H7C2G1 150 aa19.38■□□□□ 0.69
CTDNEP1-208ENST00000573600 C15orf56Q8N910 161 aa19.38■□□□□ 0.69
CTDNEP1-208ENST00000573600 LINC00526Q96FQ7 95 aa19.38■□□□□ 0.69
CTDNEP1-208ENST00000573600 C10orf25Q5T742 122 aa19.37■□□□□ 0.69
CTDNEP1-208ENST00000573600 PSMB2P49721 201 aa19.36■□□□□ 0.69
CTDNEP1-208ENST00000573600 C2orf48Q96LS8 159 aa19.36■□□□□ 0.69
CTDNEP1-208ENST00000573600 FBN3Q75N90 2809 aa19.35■□□□□ 0.69
CTDNEP1-208ENST00000573600 F8WDY8 70 aa19.35■□□□□ 0.69
CTDNEP1-208ENST00000573600 RPL13AP40429 203 aaKnown RBP19.35■□□□□ 0.69
CTDNEP1-208ENST00000573600 HIGD2BQ4VC39 106 aa19.34■□□□□ 0.69
CTDNEP1-208ENST00000573600 DYNC2H1Q8NCM8 4307 aaKnown RBP19.34■□□□□ 0.69
CTDNEP1-208ENST00000573600 C9orf116Q5BN46 136 aaPredicted RBP19.34■□□□□ 0.69
CTDNEP1-208ENST00000573600 TRBV30A0A0K0K1B3 111 aa19.33■□□□□ 0.68
CTDNEP1-208ENST00000573600 SCGB1C2P0DMR2 95 aa19.32■□□□□ 0.68
CTDNEP1-208ENST00000573600 CAMK2N2Q96S95 79 aa19.32■□□□□ 0.68
CTDNEP1-208ENST00000573600 TRAV13-2A0A0B4J235 113 aa19.31■□□□□ 0.68
CTDNEP1-208ENST00000573600 TRBV20-1A0A075B6N2 111 aa19.3■□□□□ 0.68
CTDNEP1-208ENST00000573600 C6orf48Q9UBA6 75 aa19.3■□□□□ 0.68
CTDNEP1-208ENST00000573600 PRKDCP78527 4128 aaKnown RBP19.28■□□□□ 0.68
CTDNEP1-208ENST00000573600 IGKV2-28A0A075B6P5 120 aa19.27■□□□□ 0.68
CTDNEP1-208ENST00000573600 IGKV2D-28P01615 120 aa19.27■□□□□ 0.68
CTDNEP1-208ENST00000573600 COX6CP09669 75 aa19.26■□□□□ 0.67
CTDNEP1-208ENST00000573600 TRIAP1O43715 76 aa19.25■□□□□ 0.67
CTDNEP1-208ENST00000573600 H3BMG7 143 aa19.25■□□□□ 0.67
CTDNEP1-208ENST00000573600 NDUFC2O95298 119 aa19.25■□□□□ 0.67
CTDNEP1-208ENST00000573600 LINC00337Q8N6G1 96 aa19.23■□□□□ 0.67
CTDNEP1-208ENST00000573600 TCL1BO95988 128 aa19.22■□□□□ 0.67
CTDNEP1-208ENST00000573600 Q6ZRU5 148 aa19.22■□□□□ 0.67
CTDNEP1-208ENST00000573600 MEGF8Q7Z7M0 2845 aa19.22■□□□□ 0.67
CTDNEP1-208ENST00000573600 USP17L23D6RBM5 183 aa19.2■□□□□ 0.66
CTDNEP1-208ENST00000573600 KRTAP1-5Q9BYS1 174 aa19.2■□□□□ 0.66
CTDNEP1-208ENST00000573600 SYCNQ0VAF6 134 aa19.19■□□□□ 0.66
CTDNEP1-208ENST00000573600 F8W1H4 67 aa19.17■□□□□ 0.66
CTDNEP1-208ENST00000573600 TTC32Q5I0X7 151 aa19.17■□□□□ 0.66
CTDNEP1-208ENST00000573600 CASC10Q5T4H9 136 aa19.17■□□□□ 0.66
CTDNEP1-208ENST00000573600 DNAH1Q9P2D7 4330 aa19.16■□□□□ 0.66
CTDNEP1-208ENST00000573600 ATXN8Q156A1 80 aa19.15■□□□□ 0.66
CTDNEP1-208ENST00000573600 RPL28P46779 137 aaKnown RBP19.14■□□□□ 0.65
CTDNEP1-208ENST00000573600 DNAH7Q8WXX0 4024 aa19.13■□□□□ 0.65
CTDNEP1-208ENST00000573600 NDUFC2-KCTD14E9PQ53 114 aa19.13■□□□□ 0.65
CTDNEP1-208ENST00000573600 RNF151Q2KHN1 245 aa19.13■□□□□ 0.65
CTDNEP1-208ENST00000573600 OR13C6PQ8NH95 151 aa19.12■□□□□ 0.65
CTDNEP1-208ENST00000573600 CARD19Q96LW7 228 aa19.11■□□□□ 0.65
CTDNEP1-208ENST00000573600 CSMD3Q7Z407 3707 aa19.1■□□□□ 0.65
CTDNEP1-208ENST00000573600 NBDYA0A0U1RRE5 68 aa19.1■□□□□ 0.65
CTDNEP1-208ENST00000573600 PRO0461Q9UI25 63 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms