RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 C9orf129Q5T035 196 aaKnown RBP10.42□□□□□ -0.74
MAP1LC3B-208ENST00000570189 CDKN2A-AS1Q9UH64 79 aa10.42□□□□□ -0.74
MAP1LC3B-208ENST00000570189 IGLV5-45A0A087WSX0 123 aa10.41□□□□□ -0.74
MAP1LC3B-208ENST00000570189 CKS1BP61024 79 aa10.41□□□□□ -0.74
MAP1LC3B-208ENST00000570189 FAM19A5Q7Z5A7 132 aaPredicted RBP10.41□□□□□ -0.74
MAP1LC3B-208ENST00000570189 KRTAP11-1Q8IUC1 163 aa10.41□□□□□ -0.74
MAP1LC3B-208ENST00000570189 ALKBH7Q9BT30 221 aaPredicted RBP10.41□□□□□ -0.74
MAP1LC3B-208ENST00000570189 M0QXV9 152 aa10.4□□□□□ -0.74
MAP1LC3B-208ENST00000570189 CXCL5P42830 114 aa10.4□□□□□ -0.74
MAP1LC3B-208ENST00000570189 C6orf226Q5I0X4 101 aa10.4□□□□□ -0.74
MAP1LC3B-208ENST00000570189 DIRC1Q969H9 104 aa10.4□□□□□ -0.74
MAP1LC3B-208ENST00000570189 GEMIN7Q9H840 131 aaKnown RBP10.4□□□□□ -0.74
MAP1LC3B-208ENST00000570189 SCGB3A1Q96QR1 104 aa10.39□□□□□ -0.75
MAP1LC3B-208ENST00000570189 CARHSP1Q9Y2V2 147 aaKnown RBP10.39□□□□□ -0.75
MAP1LC3B-208ENST00000570189 LRP2P98164 4655 aa10.39□□□□□ -0.75
MAP1LC3B-208ENST00000570189 TINCRA0A1B0GVN0 87 aa10.38□□□□□ -0.75
MAP1LC3B-208ENST00000570189 F8VRH5 84 aa10.38□□□□□ -0.75
MAP1LC3B-208ENST00000570189 RHEBQ15382 184 aa10.38□□□□□ -0.75
MAP1LC3B-208ENST00000570189 TOMM7Q9P0U1 55 aa10.38□□□□□ -0.75
MAP1LC3B-208ENST00000570189 SMIM1B2RUZ4 78 aa10.37□□□□□ -0.75
MAP1LC3B-208ENST00000570189 H0Y9J4 135 aa10.37□□□□□ -0.75
MAP1LC3B-208ENST00000570189 PDZD11Q5EBL8 140 aa10.37□□□□□ -0.75
MAP1LC3B-208ENST00000570189 COMMD7Q86VX2 200 aa10.36□□□□□ -0.75
MAP1LC3B-208ENST00000570189 CST9LQ9H4G1 147 aa10.35□□□□□ -0.75
MAP1LC3B-208ENST00000570189 TP73-AS1Q9UF72 201 aa10.35□□□□□ -0.75
MAP1LC3B-208ENST00000570189 UBE2BP63146 152 aa10.34□□□□□ -0.75
MAP1LC3B-208ENST00000570189 LINC00469Q8N7U9 141 aa10.34□□□□□ -0.75
MAP1LC3B-208ENST00000570189 MRPL18Q9H0U6 180 aaKnown RBP10.34□□□□□ -0.75
MAP1LC3B-208ENST00000570189 PMVKQ15126 192 aa10.33□□□□□ -0.76
MAP1LC3B-208ENST00000570189 IGLV1-50A0A075B6I6 118 aa10.32□□□□□ -0.76
MAP1LC3B-208ENST00000570189 NUPR1O60356 82 aa10.32□□□□□ -0.76
MAP1LC3B-208ENST00000570189 KRTAP1-4P0C5Y4 121 aa10.32□□□□□ -0.76
MAP1LC3B-208ENST00000570189 FABP9Q0Z7S8 132 aa10.32□□□□□ -0.76
MAP1LC3B-208ENST00000570189 FA2HQ7L5A8 372 aa10.32□□□□□ -0.76
MAP1LC3B-208ENST00000570189 COX7B2Q8TF08 81 aa10.32□□□□□ -0.76
MAP1LC3B-208ENST00000570189 LBHQ53QV2 105 aaPredicted RBP10.31□□□□□ -0.76
MAP1LC3B-208ENST00000570189 RPS10P5Q9NQ39 176 aa10.31□□□□□ -0.76
MAP1LC3B-208ENST00000570189 SMCO4Q9NRQ5 59 aa10.31□□□□□ -0.76
MAP1LC3B-208ENST00000570189 C22orf24Q9Y442 160 aa10.31□□□□□ -0.76
MAP1LC3B-208ENST00000570189 XAGE1AQ9HD64 81 aa10.3□□□□□ -0.76
MAP1LC3B-208ENST00000570189 A0A096LNJ9 63 aa10.28□□□□□ -0.76
MAP1LC3B-208ENST00000570189 ZNF861PO60384 105 aa10.28□□□□□ -0.76
MAP1LC3B-208ENST00000570189 IGLC3P0DOY3 106 aa10.28□□□□□ -0.76
MAP1LC3B-208ENST00000570189 PRR26Q8N8Z3 221 aa10.28□□□□□ -0.76
MAP1LC3B-208ENST00000570189 H3BRM9 83 aa10.27□□□□□ -0.77
MAP1LC3B-208ENST00000570189 MRPL55Q7Z7F7 128 aaKnown RBP10.27□□□□□ -0.77
MAP1LC3B-208ENST00000570189 C18orf32Q8TCD1 76 aa10.27□□□□□ -0.77
MAP1LC3B-208ENST00000570189 IGLV5-37A0A075B6J1 123 aa10.26□□□□□ -0.77
MAP1LC3B-208ENST00000570189 IGLV5-39A0A0G2JS06 123 aa10.26□□□□□ -0.77
MAP1LC3B-208ENST00000570189 LINC00614P0C842 121 aa10.26□□□□□ -0.77
MAP1LC3B-208ENST00000570189 URB1-AS1Q96HZ7 61 aa10.26□□□□□ -0.77
MAP1LC3B-208ENST00000570189 SPINK8P0C7L1 97 aa10.25□□□□□ -0.77
MAP1LC3B-208ENST00000570189 RPL13AP40429 203 aaKnown RBP10.25□□□□□ -0.77
MAP1LC3B-208ENST00000570189 HBDP02042 147 aa10.24□□□□□ -0.77
MAP1LC3B-208ENST00000570189 TRAPPC1Q9Y5R8 145 aa10.24□□□□□ -0.77
MAP1LC3B-208ENST00000570189 ATP5LO75964 103 aa10.22□□□□□ -0.77
MAP1LC3B-208ENST00000570189 SNAPINO95295 136 aa10.22□□□□□ -0.77
MAP1LC3B-208ENST00000570189 ZNF22P17026 224 aaPredicted RBP10.22□□□□□ -0.77
MAP1LC3B-208ENST00000570189 RAB5BP61020 215 aa10.22□□□□□ -0.77
MAP1LC3B-208ENST00000570189 SVBPQ8N300 66 aa10.22□□□□□ -0.77
MAP1LC3B-208ENST00000570189 BCE1O60756 84 aa10.21□□□□□ -0.77
MAP1LC3B-208ENST00000570189 LINC00167Q96N53 147 aa10.21□□□□□ -0.77
MAP1LC3B-208ENST00000570189 RNF213Q63HN8 5207 aa10.2□□□□□ -0.78
MAP1LC3B-208ENST00000570189 APOC3P02656 99 aa10.2□□□□□ -0.78
MAP1LC3B-208ENST00000570189 COX17Q14061 63 aa10.2□□□□□ -0.78
MAP1LC3B-208ENST00000570189 NDUFA5Q16718 116 aa10.2□□□□□ -0.78
MAP1LC3B-208ENST00000570189 RPL28P46779 137 aaKnown RBP10.19□□□□□ -0.78
MAP1LC3B-208ENST00000570189 SFTA2Q6UW10 78 aa10.19□□□□□ -0.78
MAP1LC3B-208ENST00000570189 YPEL4Q96NS1 127 aa10.18□□□□□ -0.78
MAP1LC3B-208ENST00000570189 KRTAP13-1Q8IUC0 172 aa10.17□□□□□ -0.78
MAP1LC3B-208ENST00000570189 NDUFA6P56556 154 aa10.16□□□□□ -0.78
MAP1LC3B-208ENST00000570189 NKAPP1Q8N9T2 125 aa10.16□□□□□ -0.78
MAP1LC3B-208ENST00000570189 C11orf86A6NJI1 115 aa10.15□□□□□ -0.78
MAP1LC3B-208ENST00000570189 PMCHL1Q16048 86 aa10.15□□□□□ -0.78
MAP1LC3B-208ENST00000570189 CHCHD1Q96BP2 118 aaKnown RBP10.15□□□□□ -0.78
MAP1LC3B-208ENST00000570189 ERG28Q9UKR5 140 aa10.15□□□□□ -0.78
MAP1LC3B-208ENST00000570189 RPL37AP8A6NKH3 93 aa10.14□□□□□ -0.79
MAP1LC3B-208ENST00000570189 BAGE3Q86Y29 109 aa10.14□□□□□ -0.79
MAP1LC3B-208ENST00000570189 ZNF625Q96I27 306 aaPredicted RBP10.14□□□□□ -0.79
MAP1LC3B-208ENST00000570189 TRAV12-1A0A0B4J245 112 aa10.13□□□□□ -0.79
MAP1LC3B-208ENST00000570189 VPREB1P12018 145 aa10.13□□□□□ -0.79
MAP1LC3B-208ENST00000570189 SND1-IT1Q9HBX3 110 aa10.13□□□□□ -0.79
MAP1LC3B-208ENST00000570189 LPAP08519 4548 aa10.12□□□□□ -0.79
MAP1LC3B-208ENST00000570189 PFN2P35080 140 aa10.12□□□□□ -0.79
MAP1LC3B-208ENST00000570189 GAGE10A6NGK3 116 aa10.11□□□□□ -0.79
MAP1LC3B-208ENST00000570189 TMEM170BQ5T4T1 132 aa10.11□□□□□ -0.79
MAP1LC3B-208ENST00000570189 A0A087X002 238 aa10.1□□□□□ -0.79
MAP1LC3B-208ENST00000570189 RPL24P83731 157 aaKnown RBP10.1□□□□□ -0.79
MAP1LC3B-208ENST00000570189 CHTOPQ9Y3Y2 248 aaKnown RBP10.1□□□□□ -0.79
MAP1LC3B-208ENST00000570189 CRYGAP11844 174 aa10.09□□□□□ -0.79
MAP1LC3B-208ENST00000570189 TMEM223A0PJW6 202 aa10.08□□□□□ -0.8
MAP1LC3B-208ENST00000570189 FAM229BQ4G0N7 80 aa10.08□□□□□ -0.8
MAP1LC3B-208ENST00000570189 IFI27L1Q96BM0 104 aa10.08□□□□□ -0.8
MAP1LC3B-208ENST00000570189 IGKV2-28A0A075B6P5 120 aa10.07□□□□□ -0.8
MAP1LC3B-208ENST00000570189 IGKV2D-28P01615 120 aa10.07□□□□□ -0.8
MAP1LC3B-208ENST00000570189 UBE2AP49459 152 aa10.07□□□□□ -0.8
MAP1LC3B-208ENST00000570189 SCO1O75880 301 aa10.06□□□□□ -0.8
MAP1LC3B-208ENST00000570189 TMEM126AQ9H061 195 aa10.06□□□□□ -0.8
MAP1LC3B-208ENST00000570189 Q8NDZ9 215 aa10.05□□□□□ -0.8
MAP1LC3B-208ENST00000570189 TYMSOSQ8TAI1 123 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms