RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 ERG28Q9UKR5 140 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 UBE2D4Q9Y2X8 147 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 CR1P17927 2039 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 CACNA1AO00555 2505 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 NCOR2Q9Y618 2525 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 CHD8Q9HCK8 2581 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 IGSF10Q6WRI0 2623 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 UBR5O95071 2799 aaPredicted RBP2.29□□□□□ -2.04
UBR1-211ENST00000569971 IGHV3-64A0A075B6Q5 118 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 TRGV2A0A075B6R0 118 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.29□□□□□ -2.04
UBR1-211ENST00000569971 TRAV8-4A0A0B4J246 113 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 A0A0B4J2C4 111 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 IGKV2-29A2NJV5 120 aaPredicted RBP2.29□□□□□ -2.04
UBR1-211ENST00000569971 BPY2O14599 106 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 UBE2L6O14933 153 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 TIMM17BO60830 172 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 IGLV1-51P01701 117 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 SCGB1C2P0DMR2 95 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 HERVK_113P63121 156 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 WFDC2Q14508 124 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 C6orf99Q4VX62 202 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 Q6ZUT4 128 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 KRTAP5-5Q701N2 237 aaPredicted RBP2.29□□□□□ -2.04
UBR1-211ENST00000569971 C1orf158Q8N1D5 194 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 C10orf126Q8N4M7 172 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 ATP6V0E2Q8NHE4 81 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 CIRBP-AS1Q8TBR5 109 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 CHCHD7Q9BUK0 85 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 NDUFA12Q9UI09 145 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 SPTBN1Q01082 2364 aaKnown RBP2.29□□□□□ -2.04
UBR1-211ENST00000569971 CACNA1BQ00975 2339 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 MUC4Q99102 2169 aa2.29□□□□□ -2.04
UBR1-211ENST00000569971 CFAP46Q8IYW2 2715 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 NBASA2RRP1 2371 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.28□□□□□ -2.044e-8■■■■■ 30.4
UBR1-211ENST00000569971 TRGV4A0A0C4DH28 118 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 FAM240AA0A1B0GVK7 77 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 NDUFA1O15239 70 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 PRM2P04554 102 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 COX6CP09669 75 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 SPINK8P0C7L1 97 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 IFITM1P13164 125 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 UBE2D3P61077 147 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 UBE2D2P62837 147 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 ATXN8Q156A1 80 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 MIAQ16674 131 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 ETDBQ3ZM63 59 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 LINC00483Q53H64 154 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 RNASE13Q5GAN3 156 aaKnown RBP2.28□□□□□ -2.04
UBR1-211ENST00000569971 ZFAND6Q6FIF0 208 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 SFTA2Q6UW10 78 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 Q6ZTI0 123 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 MUSTN1Q8IVN3 82 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 SPANXDQ9BXN6 97 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 GTSF1LQ9H1H1 148 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 NOP10Q9NPE3 64 aaKnown RBP2.28□□□□□ -2.04
UBR1-211ENST00000569971 SPANXCQ9NY87 97 aa2.28□□□□□ -2.04
UBR1-211ENST00000569971 PIEZO1Q92508 2521 aa2.27□□□□□ -2.05
UBR1-211ENST00000569971 TRAV8-3A0A0A6YYJ7 113 aa2.27□□□□□ -2.05
UBR1-211ENST00000569971 TRBV6-4A0A1B0GX49 114 aa2.27□□□□□ -2.05
UBR1-211ENST00000569971 H7C2G1 150 aa2.27□□□□□ -2.05
UBR1-211ENST00000569971 M0QXV9 152 aa2.27□□□□□ -2.05
UBR1-211ENST00000569971 PSPHP1O15172 72 aa2.27□□□□□ -2.05
UBR1-211ENST00000569971 IGHV3-33P01772 117 aa2.27□□□□□ -2.05
UBR1-211ENST00000569971 INSL3P51460 131 aa2.27□□□□□ -2.05
UBR1-211ENST00000569971 Q5W150 140 aa2.27□□□□□ -2.05
UBR1-211ENST00000569971 FAM19A3Q7Z5A8 133 aa2.27□□□□□ -2.05
UBR1-211ENST00000569971 TEN1Q86WV5 123 aa2.27□□□□□ -2.05
UBR1-211ENST00000569971 PPDPFLQ8WWR9 84 aa2.27□□□□□ -2.05
UBR1-211ENST00000569971 SIGMAR1Q99720 223 aa2.27□□□□□ -2.05
UBR1-211ENST00000569971 CDKN2A-AS1Q9UH64 79 aa2.27□□□□□ -2.05
UBR1-211ENST00000569971 ANKRD17O75179 2603 aaKnown RBP2.27□□□□□ -2.05
UBR1-211ENST00000569971 RELNP78509 3460 aa2.27□□□□□ -2.05
UBR1-211ENST00000569971 AKAP6Q13023 2319 aa2.26□□□□□ -2.05
UBR1-211ENST00000569971 FLNCQ14315 2725 aa2.26□□□□□ -2.05
UBR1-211ENST00000569971 ASH1LQ9NR48 2969 aaKnown RBP2.26□□□□□ -2.05
UBR1-211ENST00000569971 UTP20O75691 2785 aaKnown RBP2.26□□□□□ -2.05
UBR1-211ENST00000569971 TRAV13-1A0A0B4J241 112 aa2.26□□□□□ -2.05
UBR1-211ENST00000569971 TRBV30A0A0K0K1B3 111 aa2.26□□□□□ -2.05
UBR1-211ENST00000569971 SMIM9A6NGZ8 99 aa2.26□□□□□ -2.05
UBR1-211ENST00000569971 C9JAW5 83 aa2.26□□□□□ -2.05
UBR1-211ENST00000569971 SLC25A20O43772 301 aa2.26□□□□□ -2.05
UBR1-211ENST00000569971 TCL1BO95988 128 aa2.26□□□□□ -2.05
UBR1-211ENST00000569971 SCGB1A1P11684 91 aa2.26□□□□□ -2.05
UBR1-211ENST00000569971 TTC32Q5I0X7 151 aa2.26□□□□□ -2.05
UBR1-211ENST00000569971 MEIG1Q5JSS6 88 aa2.26□□□□□ -2.05
UBR1-211ENST00000569971 FAM19A1Q7Z5A9 133 aa2.26□□□□□ -2.05
UBR1-211ENST00000569971 SBSPONQ8IVN8 264 aa2.26□□□□□ -2.05
UBR1-211ENST00000569971 LINC00167Q96N53 147 aa2.26□□□□□ -2.05
UBR1-211ENST00000569971 CDC42SE2Q9NRR3 84 aa2.26□□□□□ -2.05
UBR1-211ENST00000569971 ICOSQ9Y6W8 199 aa2.26□□□□□ -2.05
UBR1-211ENST00000569971 CELSR1Q9NYQ6 3014 aa2.26□□□□□ -2.05
UBR1-211ENST00000569971 MED13LQ71F56 2210 aa2.26□□□□□ -2.05
UBR1-211ENST00000569971 USP9XQ93008 2570 aaPredicted RBP2.25□□□□□ -2.05
UBR1-211ENST00000569971 TRBV6-8A0A0A6YYG3 113 aa2.25□□□□□ -2.05
UBR1-211ENST00000569971 TMEM262E9PQX1 116 aa2.25□□□□□ -2.05
UBR1-211ENST00000569971 NDUFS5O43920 106 aa2.25□□□□□ -2.05
UBR1-211ENST00000569971 LINC00694P0DN24 101 aa2.25□□□□□ -2.05
UBR1-211ENST00000569971 DEFB130BP0DP73 79 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms