RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 CXCL5P42830 114 aa12.41□□□□□ -0.42
COMMD4-213ENST00000565834 CKS1BP61024 79 aa12.41□□□□□ -0.42
COMMD4-213ENST00000565834 SFTA2Q6UW10 78 aa12.41□□□□□ -0.42
COMMD4-213ENST00000565834 A0A0J9YXY3 114 aa12.4□□□□□ -0.42
COMMD4-213ENST00000565834 HERV-K104P63124 156 aa12.4□□□□□ -0.42
COMMD4-213ENST00000565834 HIGD2BQ4VC39 106 aa12.4□□□□□ -0.42
COMMD4-213ENST00000565834 HIGD1BQ9P298 99 aa12.4□□□□□ -0.42
COMMD4-213ENST00000565834 DNAH6Q9C0G6 4158 aa12.39□□□□□ -0.43
COMMD4-213ENST00000565834 ZNF561-AS1K7EIQ3 104 aa12.39□□□□□ -0.43
COMMD4-213ENST00000565834 USP17L23D6RBM5 183 aa12.38□□□□□ -0.43
COMMD4-213ENST00000565834 HINT1P49773 126 aaPredicted RBP12.38□□□□□ -0.43
COMMD4-213ENST00000565834 C2orf82Q6UX34 121 aa12.38□□□□□ -0.43
COMMD4-213ENST00000565834 LINC00526Q96FQ7 95 aa12.38□□□□□ -0.43
COMMD4-213ENST00000565834 GVQW2A0A096LPI5 108 aaPredicted RBP12.38□□□□□ -0.43
COMMD4-213ENST00000565834 C6orf223Q8N319 242 aa12.38□□□□□ -0.43
COMMD4-213ENST00000565834 NTN5Q8WTR8 489 aaPredicted RBP12.37□□□□□ -0.43
COMMD4-213ENST00000565834 KMT2AQ03164 3969 aa12.37□□□□□ -0.43
COMMD4-213ENST00000565834 Q6ZRN7 208 aaPredicted RBP12.36□□□□□ -0.43
COMMD4-213ENST00000565834 LECT2O14960 151 aa12.35□□□□□ -0.43
COMMD4-213ENST00000565834 MEIG1Q5JSS6 88 aa12.35□□□□□ -0.43
COMMD4-213ENST00000565834 TMEM238C9JI98 176 aa12.35□□□□□ -0.43
COMMD4-213ENST00000565834 DNAH10Q8IVF4 4471 aa12.34□□□□□ -0.43
COMMD4-213ENST00000565834 CIRBPQ14011 172 aaKnown RBP12.34□□□□□ -0.43
COMMD4-213ENST00000565834 C2orf48Q96LS8 159 aa12.34□□□□□ -0.43
COMMD4-213ENST00000565834 CAMK2N2Q96S95 79 aa12.34□□□□□ -0.43
COMMD4-213ENST00000565834 TIMM17BO60830 172 aa12.33□□□□□ -0.44
COMMD4-213ENST00000565834 BVES-AS1Q5T3Y7 98 aa12.33□□□□□ -0.44
COMMD4-213ENST00000565834 UNQ6190/PRO20217Q6UXQ8 127 aa12.33□□□□□ -0.44
COMMD4-213ENST00000565834 F8WDY8 70 aa12.32□□□□□ -0.44
COMMD4-213ENST00000565834 C10orf25Q5T742 122 aa12.32□□□□□ -0.44
COMMD4-213ENST00000565834 C1orf134Q5TEV5 83 aa12.32□□□□□ -0.44
COMMD4-213ENST00000565834 HIST1H4GQ99525 98 aa12.32□□□□□ -0.44
COMMD4-213ENST00000565834 HSD52Q0P140 79 aa12.32□□□□□ -0.44
COMMD4-213ENST00000565834 SRSF9Q13242 221 aaKnown RBP eCLIP12.32□□□□□ -0.44
COMMD4-213ENST00000565834 WFDC2Q14508 124 aa12.32□□□□□ -0.44
COMMD4-213ENST00000565834 LITAFQ99732 161 aa12.32□□□□□ -0.44
COMMD4-213ENST00000565834 SPANXB1Q9NS25 103 aaPredicted RBP12.32□□□□□ -0.44
COMMD4-213ENST00000565834 SMIM13P0DJ93 91 aa12.31□□□□□ -0.44
COMMD4-213ENST00000565834 ERG28Q9UKR5 140 aa12.31□□□□□ -0.44
COMMD4-213ENST00000565834 A0A0U1RRA0 63 aa12.3□□□□□ -0.44
COMMD4-213ENST00000565834 TAL2Q16559 108 aa12.29□□□□□ -0.44
COMMD4-213ENST00000565834 C14orf177Q52M58 125 aa12.29□□□□□ -0.44
COMMD4-213ENST00000565834 ADAMTSL4-AS1Q5T5F5 129 aa12.29□□□□□ -0.44
COMMD4-213ENST00000565834 TRBV30A0A0K0K1B3 111 aa12.29□□□□□ -0.44
COMMD4-213ENST00000565834 PFN2P35080 140 aa12.29□□□□□ -0.44
COMMD4-213ENST00000565834 LINC00158P58513 81 aa12.29□□□□□ -0.44
COMMD4-213ENST00000565834 SYCNQ0VAF6 134 aa12.29□□□□□ -0.44
COMMD4-213ENST00000565834 Q6ZRU5 148 aa12.29□□□□□ -0.44
COMMD4-213ENST00000565834 C6orf48Q9UBA6 75 aa12.29□□□□□ -0.44
COMMD4-213ENST00000565834 LRCOL1A6NCL2 159 aa12.28□□□□□ -0.44
COMMD4-213ENST00000565834 A6NDN8 102 aa12.28□□□□□ -0.44
COMMD4-213ENST00000565834 C9orf116Q5BN46 136 aaPredicted RBP12.28□□□□□ -0.44
COMMD4-213ENST00000565834 SPANXDQ9BXN6 97 aa12.28□□□□□ -0.44
COMMD4-213ENST00000565834 SPANXCQ9NY87 97 aa12.28□□□□□ -0.44
COMMD4-213ENST00000565834 LCE6AA0A183 80 aa12.27□□□□□ -0.45
COMMD4-213ENST00000565834 Q6ZVH6 145 aa12.27□□□□□ -0.45
COMMD4-213ENST00000565834 DAND5Q8N907 189 aa12.27□□□□□ -0.45
COMMD4-213ENST00000565834 COX17Q14061 63 aa12.26□□□□□ -0.45
COMMD4-213ENST00000565834 CARD19Q96LW7 228 aa12.26□□□□□ -0.45
COMMD4-213ENST00000565834 GCSHP23434 173 aa12.26□□□□□ -0.45
COMMD4-213ENST00000565834 UBE2V1Q13404 147 aa12.26□□□□□ -0.45
COMMD4-213ENST00000565834 CEND1Q8N111 149 aa12.26□□□□□ -0.45
COMMD4-213ENST00000565834 SLPIP03973 132 aa12.24□□□□□ -0.45
COMMD4-213ENST00000565834 MIR7-3HGQ8N6C7 128 aa12.24□□□□□ -0.45
COMMD4-213ENST00000565834 KMT2CQ8NEZ4 4911 aaKnown RBP12.24□□□□□ -0.45
COMMD4-213ENST00000565834 PTTG1IPP53801 180 aa12.23□□□□□ -0.45
COMMD4-213ENST00000565834 NPC2P61916 151 aa12.23□□□□□ -0.45
COMMD4-213ENST00000565834 DNAH2Q9P225 4427 aa12.23□□□□□ -0.45
COMMD4-213ENST00000565834 TAX1BP3O14907 124 aa12.22□□□□□ -0.45
COMMD4-213ENST00000565834 MUSTN1Q8IVN3 82 aa12.22□□□□□ -0.45
COMMD4-213ENST00000565834 SACSQ9NZJ4 4579 aa12.22□□□□□ -0.45
COMMD4-213ENST00000565834 A0A087WTM6 91 aa12.22□□□□□ -0.45
COMMD4-213ENST00000565834 IFITM1P13164 125 aa12.22□□□□□ -0.45
COMMD4-213ENST00000565834 RNF151Q2KHN1 245 aa12.22□□□□□ -0.45
COMMD4-213ENST00000565834 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-213ENST00000565834 CNBPP62633 177 aaKnown RBP12.21□□□□□ -0.45
COMMD4-213ENST00000565834 LINC00308Q8TCZ7 52 aa12.21□□□□□ -0.45
COMMD4-213ENST00000565834 COPS9Q8WXC6 57 aa12.21□□□□□ -0.45
COMMD4-213ENST00000565834 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.2□□□□□ -0.46
COMMD4-213ENST00000565834 FXYD2P54710 66 aa12.2□□□□□ -0.46
COMMD4-213ENST00000565834 VAMP3Q15836 100 aa12.2□□□□□ -0.46
COMMD4-213ENST00000565834 RPL24P83731 157 aaKnown RBP12.19□□□□□ -0.46
COMMD4-213ENST00000565834 Q8N814 137 aa12.19□□□□□ -0.46
COMMD4-213ENST00000565834 HYDINQ4G0P3 5121 aa12.19□□□□□ -0.46
COMMD4-213ENST00000565834 NDUFC2-KCTD14E9PQ53 114 aa12.18□□□□□ -0.46
COMMD4-213ENST00000565834 SOSTDC1Q6X4U4 206 aa12.18□□□□□ -0.46
COMMD4-213ENST00000565834 TMEM238LA0A1B0GVL6 79 aa12.17□□□□□ -0.46
COMMD4-213ENST00000565834 A6NJY4 79 aa12.17□□□□□ -0.46
COMMD4-213ENST00000565834 EIF4EBP3O60516 100 aaPredicted RBP12.17□□□□□ -0.46
COMMD4-213ENST00000565834 RTL8CO15255 209 aa12.16□□□□□ -0.46
COMMD4-213ENST00000565834 PPDPFQ9H3Y8 114 aa12.16□□□□□ -0.46
COMMD4-213ENST00000565834 SND1-IT1Q9HBX3 110 aa12.16□□□□□ -0.46
COMMD4-213ENST00000565834 A4D1N5 150 aa12.16□□□□□ -0.46
COMMD4-213ENST00000565834 FRAS1Q86XX4 4008 aa12.15□□□□□ -0.46
COMMD4-213ENST00000565834 TLX1NBP0CAT3 122 aa12.15□□□□□ -0.46
COMMD4-213ENST00000565834 TNP2Q05952 138 aa12.14□□□□□ -0.47
COMMD4-213ENST00000565834 GTF2H5Q6ZYL4 71 aa12.14□□□□□ -0.47
COMMD4-213ENST00000565834 DNAH17Q9UFH2 4485 aa12.14□□□□□ -0.47
COMMD4-213ENST00000565834 C9orf118A6NHY6 69 aa12.13□□□□□ -0.47
COMMD4-213ENST00000565834 RPL18AQ02543 176 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms