RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 ORMDL2Q53FV1 153 aa3.79□□□□□ -1.8
LINC01963-201ENST00000562038 OR5A1Q8NGJ0 315 aa3.79□□□□□ -1.8
LINC01963-201ENST00000562038 MSRB1Q9NZV6 116 aa3.79□□□□□ -1.8
LINC01963-201ENST00000562038 A0A1B0GWB2 263 aa3.79□□□□□ -1.8
LINC01963-201ENST00000562038 TSHBP01222 138 aa3.79□□□□□ -1.8
LINC01963-201ENST00000562038 MYCBP2O75592 4640 aa3.79□□□□□ -1.8
LINC01963-201ENST00000562038 APCSP02743 223 aa3.79□□□□□ -1.8
LINC01963-201ENST00000562038 IFITM1P13164 125 aa3.79□□□□□ -1.8
LINC01963-201ENST00000562038 C1orf134Q5TEV5 83 aa3.79□□□□□ -1.8
LINC01963-201ENST00000562038 TIMM17AQ99595 171 aa3.79□□□□□ -1.8
LINC01963-201ENST00000562038 IGHV3-38A0A0C4DH36 116 aa3.78□□□□□ -1.8
LINC01963-201ENST00000562038 PRM2P04554 102 aa3.78□□□□□ -1.8
LINC01963-201ENST00000562038 HTN1P15515 57 aa3.78□□□□□ -1.8
LINC01963-201ENST00000562038 PMVKQ15126 192 aa3.78□□□□□ -1.8
LINC01963-201ENST00000562038 MAPKAPK5-AS1Q8N8E1 139 aa3.78□□□□□ -1.8
LINC01963-201ENST00000562038 TMEM141Q96I45 108 aa3.78□□□□□ -1.8
LINC01963-201ENST00000562038 FAM30AQ9NZY2 134 aa3.78□□□□□ -1.8
LINC01963-201ENST00000562038 TMSB15BA0A087X1C1 80 aa3.78□□□□□ -1.8
LINC01963-201ENST00000562038 ANKRD29Q8N6D5 301 aa3.78□□□□□ -1.8
LINC01963-201ENST00000562038 CHCHD1Q96BP2 118 aaKnown RBP3.78□□□□□ -1.8
LINC01963-201ENST00000562038 FAM218AQ96MZ4 157 aa3.78□□□□□ -1.8
LINC01963-201ENST00000562038 SDHAF1A6NFY7 115 aa3.77□□□□□ -1.81
LINC01963-201ENST00000562038 H3BUT2 72 aa3.77□□□□□ -1.81
LINC01963-201ENST00000562038 J3QR89 54 aa3.77□□□□□ -1.81
LINC01963-201ENST00000562038 KRTAP26-1Q6PEX3 210 aa3.77□□□□□ -1.81
LINC01963-201ENST00000562038 NTM-AS1Q6ZSK4 140 aa3.77□□□□□ -1.81
LINC01963-201ENST00000562038 APOBP04114 4563 aaKnown RBP3.77□□□□□ -1.81
LINC01963-201ENST00000562038 K7EP34 96 aa3.77□□□□□ -1.81
LINC01963-201ENST00000562038 COA6Q5JTJ3 125 aaKnown RBP3.77□□□□□ -1.81
LINC01963-201ENST00000562038 Q6ZRU5 148 aa3.77□□□□□ -1.81
LINC01963-201ENST00000562038 C20orf203Q8NBC4 194 aa3.77□□□□□ -1.81
LINC01963-201ENST00000562038 DSCR8Q96T75 97 aa3.77□□□□□ -1.81
LINC01963-201ENST00000562038 EPM2AB3EWF7 344 aa3.77□□□□□ -1.81
LINC01963-201ENST00000562038 LINC00310P59036 64 aa3.77□□□□□ -1.81
LINC01963-201ENST00000562038 GAGE13Q4V321 117 aa3.77□□□□□ -1.81
LINC01963-201ENST00000562038 PMCHL2Q9BQD1 86 aa3.77□□□□□ -1.81
LINC01963-201ENST00000562038 KRTAP29-1A8MX34 341 aaPredicted RBP3.76□□□□□ -1.81
LINC01963-201ENST00000562038 MGPP08493 103 aa3.76□□□□□ -1.81
LINC01963-201ENST00000562038 CNBPP62633 177 aaKnown RBP3.76□□□□□ -1.81
LINC01963-201ENST00000562038 SEC11AP67812 179 aa3.76□□□□□ -1.81
LINC01963-201ENST00000562038 MRPL54Q6P161 138 aaKnown RBP3.76□□□□□ -1.81
LINC01963-201ENST00000562038 SFTA2Q6UW10 78 aa3.76□□□□□ -1.81
LINC01963-201ENST00000562038 PRELID3AQ96N28 172 aa3.76□□□□□ -1.81
LINC01963-201ENST00000562038 STAB2Q8WWQ8 2551 aa3.76□□□□□ -1.81
LINC01963-201ENST00000562038 RTL8CO15255 209 aa3.76□□□□□ -1.81
LINC01963-201ENST00000562038 C3orf79P0CE67 100 aa3.76□□□□□ -1.81
LINC01963-201ENST00000562038 CKS2P33552 79 aa3.76□□□□□ -1.81
LINC01963-201ENST00000562038 Q8N976 141 aa3.76□□□□□ -1.81
LINC01963-201ENST00000562038 TOMM6Q96B49 74 aa3.76□□□□□ -1.81
LINC01963-201ENST00000562038 UBE2D4Q9Y2X8 147 aa3.76□□□□□ -1.81
LINC01963-201ENST00000562038 A0A0J9YY99 117 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 hDV102S1A0JD36 115 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 LY6G6CO95867 125 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 HTN3P15516 51 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 FAM74A4Q5TZK3 123 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 LINC00337Q8N6G1 96 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 AMELXQ99217 191 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 IGLV5-45A0A087WSX0 123 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 LOC100131303A0A0U1RQF7 123 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 LRCOL1A6NCL2 159 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 NDUFC2O95298 119 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 FAT4Q6V0I7 4981 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 GVQW2A0A096LPI5 108 aaPredicted RBP3.75□□□□□ -1.81
LINC01963-201ENST00000562038 D6R8Y8 96 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 GAGE2BQ13066 116 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 SS18Q15532 418 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 PMCHL1Q16048 86 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 GAGE2EQ4V326 116 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 BVES-AS1Q5T3Y7 98 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 GAGE2AQ6NT46 116 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 WFDC10BQ8IUB3 73 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 CDC42SE2Q9NRR3 84 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 GAGE2DQ9UEU5 116 aa3.75□□□□□ -1.81
LINC01963-201ENST00000562038 FAT3Q8TDW7 4589 aa3.74□□□□□ -1.81
LINC01963-201ENST00000562038 WFDC2Q14508 124 aa3.74□□□□□ -1.81
LINC01963-201ENST00000562038 DNAH8Q96JB1 4490 aa3.74□□□□□ -1.81
LINC01963-201ENST00000562038 TRAV12-1A0A0B4J245 112 aa3.74□□□□□ -1.81
LINC01963-201ENST00000562038 UBE2L6O14933 153 aa3.74□□□□□ -1.81
LINC01963-201ENST00000562038 NPYP01303 97 aa3.74□□□□□ -1.81
LINC01963-201ENST00000562038 C9orf153Q5TBE3 101 aa3.74□□□□□ -1.81
LINC01963-201ENST00000562038 MRPL18Q9H0U6 180 aaKnown RBP3.74□□□□□ -1.81
LINC01963-201ENST00000562038 CYSTM1Q9H1C7 97 aa3.74□□□□□ -1.81
LINC01963-201ENST00000562038 FCER1GP30273 86 aa3.73□□□□□ -1.81
LINC01963-201ENST00000562038 SMCPP49901 116 aaPredicted RBP3.73□□□□□ -1.81
LINC01963-201ENST00000562038 CIRBPQ14011 172 aaKnown RBP3.73□□□□□ -1.81
LINC01963-201ENST00000562038 ETDBQ3ZM63 59 aa3.73□□□□□ -1.81
LINC01963-201ENST00000562038 CHCHD5Q9BSY4 110 aa3.73□□□□□ -1.81
LINC01963-201ENST00000562038 KRTAP1-5Q9BYS1 174 aa3.73□□□□□ -1.81
LINC01963-201ENST00000562038 IGIPA6NJ69 53 aa3.73□□□□□ -1.81
LINC01963-201ENST00000562038 TRIAP1O43715 76 aa3.73□□□□□ -1.81
LINC01963-201ENST00000562038 DPM2O94777 84 aa3.73□□□□□ -1.81
LINC01963-201ENST00000562038 ENHOQ6UWT2 76 aa3.73□□□□□ -1.81
LINC01963-201ENST00000562038 RPL39LQ96EH5 51 aaKnown RBP3.73□□□□□ -1.81
LINC01963-201ENST00000562038 A0A087WTM6 91 aa3.73□□□□□ -1.81
LINC01963-201ENST00000562038 A0A087WZ39 114 aa3.73□□□□□ -1.81
LINC01963-201ENST00000562038 SRSF9Q13242 221 aaKnown RBP eCLIP3.73□□□□□ -1.81
LINC01963-201ENST00000562038 SPCS1Q9Y6A9 102 aa3.73□□□□□ -1.81
LINC01963-201ENST00000562038 IGHV1-58A0A0C4DH39 117 aa3.72□□□□□ -1.81
LINC01963-201ENST00000562038 EIF4EBP3O60516 100 aaPredicted RBP3.72□□□□□ -1.81
LINC01963-201ENST00000562038 CRPP02741 224 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms