RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 GCSHP23434 173 aa10.92□□□□□ -0.66
RPL28-211ENST00000560881 RPL24P83731 157 aaKnown RBP10.92□□□□□ -0.66
RPL28-211ENST00000560881 FOXI1Q12951 378 aa10.92□□□□□ -0.66
RPL28-211ENST00000560881 ODF1Q14990 250 aa10.92□□□□□ -0.66
RPL28-211ENST00000560881 APOBP04114 4563 aaKnown RBP10.91□□□□□ -0.66
RPL28-211ENST00000560881 E9PLD3 99 aa10.91□□□□□ -0.66
RPL28-211ENST00000560881 SS18Q15532 418 aa10.91□□□□□ -0.66
RPL28-211ENST00000560881 ZC2HC1BQ5TFG8 222 aa10.91□□□□□ -0.66
RPL28-211ENST00000560881 IGKCP01834 107 aa10.9□□□□□ -0.66
RPL28-211ENST00000560881 FXYD2P54710 66 aa10.9□□□□□ -0.66
RPL28-211ENST00000560881 MRPS36P82909 103 aaKnown RBP10.9□□□□□ -0.66
RPL28-211ENST00000560881 LINC01620Q4KN68 170 aa10.9□□□□□ -0.66
RPL28-211ENST00000560881 CEND1Q8N111 149 aa10.9□□□□□ -0.66
RPL28-211ENST00000560881 PYGO1Q9Y3Y4 419 aa10.9□□□□□ -0.66
RPL28-211ENST00000560881 PRSS1P07477 247 aa10.89□□□□□ -0.67
RPL28-211ENST00000560881 NTN5Q8WTR8 489 aaPredicted RBP10.89□□□□□ -0.67
RPL28-211ENST00000560881 DPM2O94777 84 aa10.89□□□□□ -0.67
RPL28-211ENST00000560881 KRTAP10-1P60331 282 aa10.89□□□□□ -0.67
RPL28-211ENST00000560881 C15orf56Q8N910 161 aa10.89□□□□□ -0.67
RPL28-211ENST00000560881 TOMM6Q96B49 74 aa10.89□□□□□ -0.67
RPL28-211ENST00000560881 SPANXB1Q9NS25 103 aaPredicted RBP10.89□□□□□ -0.67
RPL28-211ENST00000560881 A0A1B0GV72 72 aa10.88□□□□□ -0.67
RPL28-211ENST00000560881 IGIPA6NJ69 53 aa10.88□□□□□ -0.67
RPL28-211ENST00000560881 TMEM141Q96I45 108 aa10.88□□□□□ -0.67
RPL28-211ENST00000560881 IGKV2D-26A0A0A0MRZ7 120 aa10.86□□□□□ -0.67
RPL28-211ENST00000560881 HIGD2BQ4VC39 106 aa10.86□□□□□ -0.67
RPL28-211ENST00000560881 C14orf177Q52M58 125 aa10.86□□□□□ -0.67
RPL28-211ENST00000560881 CD164L2Q6UWJ8 174 aa10.86□□□□□ -0.67
RPL28-211ENST00000560881 HSPG2P98160 4391 aa10.86□□□□□ -0.67
RPL28-211ENST00000560881 RYR1P21817 5038 aa10.85□□□□□ -0.67
RPL28-211ENST00000560881 NHP2Q9NX24 153 aaKnown RBP10.85□□□□□ -0.67
RPL28-211ENST00000560881 C5orf38Q86SI9 138 aa10.84□□□□□ -0.67
RPL28-211ENST00000560881 SCGB3A1Q96QR1 104 aa10.84□□□□□ -0.67
RPL28-211ENST00000560881 DNAH8Q96JB1 4490 aa10.84□□□□□ -0.67
RPL28-211ENST00000560881 K7ERJ3 54 aa10.83□□□□□ -0.68
RPL28-211ENST00000560881 AMELXQ99217 191 aa10.83□□□□□ -0.68
RPL28-211ENST00000560881 TIMM17AQ99595 171 aa10.83□□□□□ -0.68
RPL28-211ENST00000560881 A0A1B0GWB2 263 aa10.82□□□□□ -0.68
RPL28-211ENST00000560881 SLPIP03973 132 aa10.82□□□□□ -0.68
RPL28-211ENST00000560881 HAMPP81172 84 aa10.82□□□□□ -0.68
RPL28-211ENST00000560881 LINC00526Q96FQ7 95 aa10.82□□□□□ -0.68
RPL28-211ENST00000560881 VCX2Q9H322 139 aa10.82□□□□□ -0.68
RPL28-211ENST00000560881 PLNP26678 52 aa10.82□□□□□ -0.68
RPL28-211ENST00000560881 UBE2D1P51668 147 aa10.82□□□□□ -0.68
RPL28-211ENST00000560881 COX6A2Q02221 97 aa10.82□□□□□ -0.68
RPL28-211ENST00000560881 LINC00242Q5T6M2 205 aa10.82□□□□□ -0.68
RPL28-211ENST00000560881 SVIPQ8NHG7 77 aa10.82□□□□□ -0.68
RPL28-211ENST00000560881 COX7A2LO14548 114 aa10.81□□□□□ -0.68
RPL28-211ENST00000560881 CFAP161Q6P656 301 aa10.81□□□□□ -0.68
RPL28-211ENST00000560881 GVQW2A0A096LPI5 108 aaPredicted RBP10.8□□□□□ -0.68
RPL28-211ENST00000560881 IGHV3OR16-9A0A0B4J2B5 98 aa10.8□□□□□ -0.68
RPL28-211ENST00000560881 FAM30AQ9NZY2 134 aa10.8□□□□□ -0.68
RPL28-211ENST00000560881 PRO0461Q9UI25 63 aa10.8□□□□□ -0.68
RPL28-211ENST00000560881 TRAV12-1A0A0B4J245 112 aa10.79□□□□□ -0.68
RPL28-211ENST00000560881 IGHV1-58A0A0C4DH39 117 aa10.79□□□□□ -0.68
RPL28-211ENST00000560881 MALP21145 153 aa10.79□□□□□ -0.68
RPL28-211ENST00000560881 HERC2O95714 4834 aa10.79□□□□□ -0.68
RPL28-211ENST00000560881 TTTY13Q9BZ97 58 aa10.79□□□□□ -0.68
RPL28-211ENST00000560881 MTURNQ8N3F0 131 aa10.78□□□□□ -0.68
RPL28-211ENST00000560881 MRPL35Q9NZE8 188 aaKnown RBP10.78□□□□□ -0.68
RPL28-211ENST00000560881 CNBPP62633 177 aaKnown RBP10.77□□□□□ -0.69
RPL28-211ENST00000560881 PAPPA-AS1Q5QFB9 102 aa10.77□□□□□ -0.69
RPL28-211ENST00000560881 HIST1H4GQ99525 98 aa10.77□□□□□ -0.69
RPL28-211ENST00000560881 LINC01549A6NIU2 74 aa10.76□□□□□ -0.69
RPL28-211ENST00000560881 CDK2AP2O75956 126 aa10.76□□□□□ -0.69
RPL28-211ENST00000560881 C9orf163Q8N9P6 203 aa10.76□□□□□ -0.69
RPL28-211ENST00000560881 H3BMG7 143 aa10.76□□□□□ -0.69
RPL28-211ENST00000560881 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.76□□□□□ -0.69
RPL28-211ENST00000560881 XGP55808 180 aa10.76□□□□□ -0.69
RPL28-211ENST00000560881 A0A0J9YXV3 536 aa10.75□□□□□ -0.69
RPL28-211ENST00000560881 MYMXA0A1B0GTQ4 84 aa10.75□□□□□ -0.69
RPL28-211ENST00000560881 ETDBQ3ZM63 59 aa10.75□□□□□ -0.69
RPL28-211ENST00000560881 KRTAP17-1Q9BYP8 105 aa10.75□□□□□ -0.69
RPL28-211ENST00000560881 IGLV4-69A0A075B6H9 119 aa10.74□□□□□ -0.69
RPL28-211ENST00000560881 F8VRH5 84 aa10.74□□□□□ -0.69
RPL28-211ENST00000560881 ZNF561-AS1K7EIQ3 104 aa10.74□□□□□ -0.69
RPL28-211ENST00000560881 CKS1BP61024 79 aa10.74□□□□□ -0.69
RPL28-211ENST00000560881 A0A087WZ39 114 aa10.73□□□□□ -0.69
RPL28-211ENST00000560881 TMEM238LA0A1B0GVL6 79 aa10.73□□□□□ -0.69
RPL28-211ENST00000560881 A6NJY4 79 aa10.73□□□□□ -0.69
RPL28-211ENST00000560881 SPAG11BQ08648 103 aa10.73□□□□□ -0.69
RPL28-211ENST00000560881 PMVKQ15126 192 aa10.73□□□□□ -0.69
RPL28-211ENST00000560881 Q6ZSA8 131 aa10.73□□□□□ -0.69
RPL28-211ENST00000560881 FAM19A3Q7Z5A8 133 aa10.73□□□□□ -0.69
RPL28-211ENST00000560881 IGHV3-64A0A075B6Q5 118 aa10.73□□□□□ -0.69
RPL28-211ENST00000560881 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.73□□□□□ -0.69
RPL28-211ENST00000560881 APOMO95445 188 aa10.73□□□□□ -0.69
RPL28-211ENST00000560881 LYRM7Q5U5X0 104 aa10.72□□□□□ -0.69
RPL28-211ENST00000560881 CDKN2A-AS1Q9UH64 79 aa10.72□□□□□ -0.69
RPL28-211ENST00000560881 PANO1I0J062 215 aa10.71□□□□□ -0.69
RPL28-211ENST00000560881 HERVK_113P63121 156 aa10.71□□□□□ -0.69
RPL28-211ENST00000560881 GEMIN7Q9H840 131 aaKnown RBP10.71□□□□□ -0.69
RPL28-211ENST00000560881 SDIM1Q6ZPB5 146 aa10.7□□□□□ -0.7
RPL28-211ENST00000560881 Q6ZRU5 148 aa10.7□□□□□ -0.7
RPL28-211ENST00000560881 CARD19Q96LW7 228 aa10.7□□□□□ -0.7
RPL28-211ENST00000560881 FAT1Q14517 4588 aa10.7□□□□□ -0.7
RPL28-211ENST00000560881 SYCNQ0VAF6 134 aa10.69□□□□□ -0.7
RPL28-211ENST00000560881 CAMK2N2Q96S95 79 aa10.69□□□□□ -0.7
RPL28-211ENST00000560881 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.69□□□□□ -0.7
RPL28-211ENST00000560881 TINCRA0A1B0GVN0 87 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms