RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 TSPEAR-AS2P59090 65 aa6.12□□□□□ -1.43
HERC1-206ENST00000559996 ANKRD39Q53RE8 183 aa6.12□□□□□ -1.43
HERC1-206ENST00000559996 LINC00526Q96FQ7 95 aa6.12□□□□□ -1.43
HERC1-206ENST00000559996 GVQW2A0A096LPI5 108 aaPredicted RBP6.11□□□□□ -1.43
HERC1-206ENST00000559996 KRTAP9-7A8MTY7 169 aa6.11□□□□□ -1.43
HERC1-206ENST00000559996 E9PLD3 99 aa6.11□□□□□ -1.43
HERC1-206ENST00000559996 KRTAP4-11Q9BYQ6 195 aa6.11□□□□□ -1.43
HERC1-206ENST00000559996 DNAH11Q96DT5 4516 aa6.1□□□□□ -1.43
HERC1-206ENST00000559996 HECTD4Q9Y4D8 3996 aa6.1□□□□□ -1.43
HERC1-206ENST00000559996 C20orf202A1L168 122 aa6.1□□□□□ -1.43
HERC1-206ENST00000559996 H3BRM9 83 aa6.1□□□□□ -1.43
HERC1-206ENST00000559996 PSCAO43653 123 aa6.1□□□□□ -1.43
HERC1-206ENST00000559996 MALP21145 153 aa6.1□□□□□ -1.43
HERC1-206ENST00000559996 HIGD2BQ4VC39 106 aa6.1□□□□□ -1.43
HERC1-206ENST00000559996 C10orf25Q5T742 122 aa6.1□□□□□ -1.43
HERC1-206ENST00000559996 ORAOV1Q8WV07 137 aa6.1□□□□□ -1.43
HERC1-206ENST00000559996 A0A1B0GVY2 172 aa6.09□□□□□ -1.43
HERC1-206ENST00000559996 LEPROTO15243 131 aa6.09□□□□□ -1.43
HERC1-206ENST00000559996 AKR1D1P51857 326 aa6.09□□□□□ -1.43
HERC1-206ENST00000559996 KRTAP19-4Q3LI73 84 aa6.09□□□□□ -1.43
HERC1-206ENST00000559996 CFAP161Q6P656 301 aa6.09□□□□□ -1.43
HERC1-206ENST00000559996 C2orf82Q6UX34 121 aa6.09□□□□□ -1.43
HERC1-206ENST00000559996 Q8IZM0 81 aa6.09□□□□□ -1.43
HERC1-206ENST00000559996 Q8N814 137 aa6.09□□□□□ -1.43
HERC1-206ENST00000559996 COX7B2Q8TF08 81 aa6.09□□□□□ -1.43
HERC1-206ENST00000559996 ZNF625Q96I27 306 aaPredicted RBP6.09□□□□□ -1.43
HERC1-206ENST00000559996 TTTY13Q9BZ97 58 aa6.09□□□□□ -1.43
HERC1-206ENST00000559996 PKD1P98161 4303 aa6.08□□□□□ -1.44
HERC1-206ENST00000559996 APOMO95445 188 aa6.08□□□□□ -1.44
HERC1-206ENST00000559996 FUSP35637 526 aaKnown RBP eCLIP6.08□□□□□ -1.44
HERC1-206ENST00000559996 KRTAP10-2P60368 255 aa6.08□□□□□ -1.44
HERC1-206ENST00000559996 UNQ6190/PRO20217Q6UXQ8 127 aa6.08□□□□□ -1.44
HERC1-206ENST00000559996 J3QQQ9 107 aa6.07□□□□□ -1.44
HERC1-206ENST00000559996 CNBPP62633 177 aaKnown RBP6.07□□□□□ -1.44
HERC1-206ENST00000559996 SPAG11BQ08648 103 aa6.07□□□□□ -1.44
HERC1-206ENST00000559996 Q6ZRU5 148 aa6.07□□□□□ -1.44
HERC1-206ENST00000559996 C2orf48Q96LS8 159 aa6.07□□□□□ -1.44
HERC1-206ENST00000559996 ZNF561-AS1K7EIQ3 104 aa6.06□□□□□ -1.44
HERC1-206ENST00000559996 C6orf226Q5I0X4 101 aa6.06□□□□□ -1.44
HERC1-206ENST00000559996 LINC00336Q6ZUF6 198 aa6.06□□□□□ -1.44
HERC1-206ENST00000559996 PCP2Q8IVA1 136 aa6.06□□□□□ -1.44
HERC1-206ENST00000559996 TOMM7Q9P0U1 55 aa6.06□□□□□ -1.44
HERC1-206ENST00000559996 C6orf48Q9UBA6 75 aa6.06□□□□□ -1.44
HERC1-206ENST00000559996 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.05□□□□□ -1.44
HERC1-206ENST00000559996 F8WDY8 70 aa6.05□□□□□ -1.44
HERC1-206ENST00000559996 C9orf116Q5BN46 136 aaPredicted RBP6.05□□□□□ -1.44
HERC1-206ENST00000559996 C9orf163Q8N9P6 203 aa6.05□□□□□ -1.44
HERC1-206ENST00000559996 PLEKHB2Q96CS7 222 aa6.05□□□□□ -1.44
HERC1-206ENST00000559996 NDUFA1O15239 70 aa6.04□□□□□ -1.44
HERC1-206ENST00000559996 HERVK_113P61574 105 aa6.04□□□□□ -1.44
HERC1-206ENST00000559996 SYCNQ0VAF6 134 aa6.04□□□□□ -1.44
HERC1-206ENST00000559996 RNF151Q2KHN1 245 aa6.04□□□□□ -1.44
HERC1-206ENST00000559996 C14orf177Q52M58 125 aa6.04□□□□□ -1.44
HERC1-206ENST00000559996 TP73-AS1Q9UF72 201 aa6.04□□□□□ -1.44
HERC1-206ENST00000559996 NDUFA12Q9UI09 145 aa6.04□□□□□ -1.44
HERC1-206ENST00000559996 PAM16Q9Y3D7 125 aa6.04□□□□□ -1.44
HERC1-206ENST00000559996 PRSS2P07478 247 aa6.03□□□□□ -1.44
HERC1-206ENST00000559996 SMIM6P0DI80 62 aa6.03□□□□□ -1.44
HERC1-206ENST00000559996 SPATA45Q537H7 98 aa6.03□□□□□ -1.44
HERC1-206ENST00000559996 SDIM1Q6ZPB5 146 aa6.03□□□□□ -1.44
HERC1-206ENST00000559996 BOD1L2Q8IYS8 172 aa6.03□□□□□ -1.44
HERC1-206ENST00000559996 CAMK2N2Q96S95 79 aa6.03□□□□□ -1.44
HERC1-206ENST00000559996 DNAH5Q8TE73 4624 aa6.03□□□□□ -1.44
HERC1-206ENST00000559996 A0A0J9YXY3 114 aa6.02□□□□□ -1.45
HERC1-206ENST00000559996 TRBV30A0A0K0K1B3 111 aa6.02□□□□□ -1.45
HERC1-206ENST00000559996 COX8AP10176 69 aa6.02□□□□□ -1.45
HERC1-206ENST00000559996 CXCL5P42830 114 aa6.02□□□□□ -1.45
HERC1-206ENST00000559996 NMUP48645 174 aa6.02□□□□□ -1.45
HERC1-206ENST00000559996 LINC01620Q4KN68 170 aa6.02□□□□□ -1.45
HERC1-206ENST00000559996 LINC00518Q8N0U6 118 aa6.02□□□□□ -1.45
HERC1-206ENST00000559996 C14orf144Q96I85 54 aa6.02□□□□□ -1.45
HERC1-206ENST00000559996 LITAFQ99732 161 aa6.02□□□□□ -1.45
HERC1-206ENST00000559996 VAMP8Q9BV40 100 aa6.02□□□□□ -1.45
HERC1-206ENST00000559996 MYMXA0A1B0GTQ4 84 aa6.01□□□□□ -1.45
HERC1-206ENST00000559996 TLX1NBP0CAT3 122 aa6.01□□□□□ -1.45
HERC1-206ENST00000559996 LGALS3P17931 250 aaKnown RBP6.01□□□□□ -1.45
HERC1-206ENST00000559996 CKS1BP61024 79 aa6.01□□□□□ -1.45
HERC1-206ENST00000559996 ADAMTSL4-AS1Q5T5F5 129 aa6.01□□□□□ -1.45
HERC1-206ENST00000559996 CARD19Q96LW7 228 aa6.01□□□□□ -1.45
HERC1-206ENST00000559996 KRTAP4-5Q9BYR2 181 aa6.01□□□□□ -1.45
HERC1-206ENST00000559996 ZNF815PA8K554 130 aa6□□□□□ -1.45
HERC1-206ENST00000559996 HSBP1L1C9JCN9 74 aa6□□□□□ -1.45
HERC1-206ENST00000559996 PANO1I0J062 215 aa6□□□□□ -1.45
HERC1-206ENST00000559996 DLEU1O43261 78 aa6□□□□□ -1.45
HERC1-206ENST00000559996 Q6ZRP5 223 aa6□□□□□ -1.45
HERC1-206ENST00000559996 H3BS24 57 aa5.99□□□□□ -1.45
HERC1-206ENST00000559996 SMIM13P0DJ93 91 aa5.99□□□□□ -1.45
HERC1-206ENST00000559996 HERV-K104P63124 156 aa5.99□□□□□ -1.45
HERC1-206ENST00000559996 C2orf91Q6ZV80 131 aa5.99□□□□□ -1.45
HERC1-206ENST00000559996 C12orf57Q99622 126 aa5.99□□□□□ -1.45
HERC1-206ENST00000559996 ERG28Q9UKR5 140 aa5.99□□□□□ -1.45
HERC1-206ENST00000559996 IGLV5-52A0A0A0MRZ9 124 aa5.98□□□□□ -1.45
HERC1-206ENST00000559996 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.98□□□□□ -1.45
HERC1-206ENST00000559996 KRTAP10-1P60331 282 aa5.98□□□□□ -1.45
HERC1-206ENST00000559996 SFTA2Q6UW10 78 aa5.98□□□□□ -1.45
HERC1-206ENST00000559996 KRTAP7-1Q8IUC3 87 aa5.98□□□□□ -1.45
HERC1-206ENST00000559996 FAM30AQ9NZY2 134 aa5.98□□□□□ -1.45
HERC1-206ENST00000559996 PKHD1P08F94 4074 aa5.97□□□□□ -1.45
HERC1-206ENST00000559996 A0A096LNI7 61 aa5.97□□□□□ -1.45
HERC1-206ENST00000559996 LOC107984156A0A0G2JMH3 177 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms