RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 PDE6GP18545 87 aa3.88□□□□□ -1.79
GABPB1-207ENST00000558335 C10orf99Q6UWK7 81 aa3.88□□□□□ -1.79
GABPB1-207ENST00000558335 Q6ZSN1 163 aa3.88□□□□□ -1.79
GABPB1-207ENST00000558335 Q6ZSV7 163 aa3.88□□□□□ -1.79
GABPB1-207ENST00000558335 PRR26Q8N8Z3 221 aa3.88□□□□□ -1.79
GABPB1-207ENST00000558335 MPLKIPQ8TAP9 179 aa3.88□□□□□ -1.79
GABPB1-207ENST00000558335 CLEC2BQ92478 149 aa3.88□□□□□ -1.79
GABPB1-207ENST00000558335 DIRC1Q969H9 104 aa3.88□□□□□ -1.79
GABPB1-207ENST00000558335 SND1-IT1Q9HBX3 110 aa3.88□□□□□ -1.79
GABPB1-207ENST00000558335 SPENQ96T58 3664 aaKnown RBP3.88□□□□□ -1.79
GABPB1-207ENST00000558335 DMXL1Q9Y485 3027 aa3.88□□□□□ -1.79
GABPB1-207ENST00000558335 MUC3AQ02505 3323 aa3.88□□□□□ -1.79
GABPB1-207ENST00000558335 NACAE9PAV3 2078 aa3.87□□□□□ -1.79
GABPB1-207ENST00000558335 TRAV23DV6A0A075B6W5 121 aa3.87□□□□□ -1.79
GABPB1-207ENST00000558335 EIF4EBP3O60516 100 aaPredicted RBP3.87□□□□□ -1.79
GABPB1-207ENST00000558335 IGLV1-51P01701 117 aa3.87□□□□□ -1.79
GABPB1-207ENST00000558335 PROK1P58294 105 aa3.87□□□□□ -1.79
GABPB1-207ENST00000558335 LINC00158P58513 81 aa3.87□□□□□ -1.79
GABPB1-207ENST00000558335 DEFB136Q30KP8 78 aa3.87□□□□□ -1.79
GABPB1-207ENST00000558335 Q8IZM0 81 aa3.87□□□□□ -1.79
GABPB1-207ENST00000558335 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.87□□□□□ -1.79
GABPB1-207ENST00000558335 NKAPP1Q8N9T2 125 aa3.87□□□□□ -1.79
GABPB1-207ENST00000558335 LIMD2Q9BT23 127 aa3.87□□□□□ -1.79
GABPB1-207ENST00000558335 NOP10Q9NPE3 64 aaKnown RBP3.87□□□□□ -1.79
GABPB1-207ENST00000558335 LINC00846Q9NV44 126 aa3.87□□□□□ -1.79
GABPB1-207ENST00000558335 ADGRG4Q8IZF6 3080 aa3.87□□□□□ -1.79
GABPB1-207ENST00000558335 LRBAP50851 2863 aa3.87□□□□□ -1.79
GABPB1-207ENST00000558335 DOPEY2Q9Y3R5 2298 aa3.87□□□□□ -1.79
GABPB1-207ENST00000558335 DNAJC9-AS1A6NH13 148 aa3.86□□□□□ -1.79
GABPB1-207ENST00000558335 KIAA0087Q14695 138 aa3.86□□□□□ -1.79
GABPB1-207ENST00000558335 RNASE13Q5GAN3 156 aaKnown RBP3.86□□□□□ -1.79
GABPB1-207ENST00000558335 XP32Q5T750 250 aa3.86□□□□□ -1.79
GABPB1-207ENST00000558335 Q6ZTI0 123 aa3.86□□□□□ -1.79
GABPB1-207ENST00000558335 DEFB104AQ8WTQ1 72 aa3.86□□□□□ -1.79
GABPB1-207ENST00000558335 ORMDL1Q9P0S3 153 aa3.86□□□□□ -1.79
GABPB1-207ENST00000558335 MED13LQ71F56 2210 aa3.86□□□□□ -1.79
GABPB1-207ENST00000558335 CFAP47Q6ZTR5 3102 aa3.86□□□□□ -1.79
GABPB1-207ENST00000558335 TACC2O95359 2948 aa3.85□□□□□ -1.79
GABPB1-207ENST00000558335 ATMQ13315 3056 aa3.85□□□□□ -1.79
GABPB1-207ENST00000558335 IGHV3OR16-9A0A0B4J2B5 98 aa3.85□□□□□ -1.79
GABPB1-207ENST00000558335 COX6A2Q02221 97 aa3.85□□□□□ -1.79
GABPB1-207ENST00000558335 MIR7-3HGQ8N6C7 128 aa3.85□□□□□ -1.79
GABPB1-207ENST00000558335 PRO0255Q9UI72 69 aa3.85□□□□□ -1.79
GABPB1-207ENST00000558335 CR1P17927 2039 aa3.85□□□□□ -1.79
GABPB1-207ENST00000558335 DOPEY1Q5JWR5 2465 aa3.84□□□□□ -1.79
GABPB1-207ENST00000558335 A0A087WVE0 104 aa3.84□□□□□ -1.79
GABPB1-207ENST00000558335 TRBV7-4A0A0J9YYF1 115 aa3.84□□□□□ -1.79
GABPB1-207ENST00000558335 hDV103S1A0JD37 113 aa3.84□□□□□ -1.79
GABPB1-207ENST00000558335 A8MUN3 132 aa3.84□□□□□ -1.79
GABPB1-207ENST00000558335 LY6G6DO95868 133 aa3.84□□□□□ -1.79
GABPB1-207ENST00000558335 NTM-AS1Q6ZSK4 140 aa3.84□□□□□ -1.79
GABPB1-207ENST00000558335 LINC00612Q8N6U2 182 aa3.84□□□□□ -1.79
GABPB1-207ENST00000558335 IGF2RP11717 2491 aa3.83□□□□□ -1.8
GABPB1-207ENST00000558335 DMXL2Q8TDJ6 3036 aa3.83□□□□□ -1.8
GABPB1-207ENST00000558335 LINC00959A0A1B0GUT2 108 aa3.83□□□□□ -1.8
GABPB1-207ENST00000558335 PRYO14603 147 aa3.83□□□□□ -1.8
GABPB1-207ENST00000558335 MP68P56378 58 aa3.83□□□□□ -1.8
GABPB1-207ENST00000558335 Q6ZTC4 211 aa3.83□□□□□ -1.8
GABPB1-207ENST00000558335 C18orf65Q6ZTR6 163 aa3.83□□□□□ -1.8
GABPB1-207ENST00000558335 LINC00269Q8N2A0 174 aa3.83□□□□□ -1.8
GABPB1-207ENST00000558335 CSNK1G2-AS1Q8NCQ2 148 aa3.83□□□□□ -1.8
GABPB1-207ENST00000558335 TMEM254Q8TBM7 123 aa3.83□□□□□ -1.8
GABPB1-207ENST00000558335 RMI2Q96E14 147 aa3.83□□□□□ -1.8
GABPB1-207ENST00000558335 TOMM7Q9P0U1 55 aa3.83□□□□□ -1.8
GABPB1-207ENST00000558335 AKAP6Q13023 2319 aa3.83□□□□□ -1.8
GABPB1-207ENST00000558335 SPTAN1Q13813 2472 aaKnown RBP3.82□□□□□ -1.8
GABPB1-207ENST00000558335 IGHV4-28A0A0C4DH34 117 aa3.82□□□□□ -1.8
GABPB1-207ENST00000558335 NDUFB1O75438 58 aa3.82□□□□□ -1.8
GABPB1-207ENST00000558335 CCL18P55774 89 aa3.82□□□□□ -1.8
GABPB1-207ENST00000558335 SYCNQ0VAF6 134 aa3.82□□□□□ -1.8
GABPB1-207ENST00000558335 C9orf66Q5T8R8 295 aa3.82□□□□□ -1.8
GABPB1-207ENST00000558335 ENHOQ6UWT2 76 aa3.82□□□□□ -1.8
GABPB1-207ENST00000558335 SOSTDC1Q6X4U4 206 aa3.82□□□□□ -1.8
GABPB1-207ENST00000558335 ZNF843Q8N446 348 aa3.82□□□□□ -1.8
GABPB1-207ENST00000558335 LINC01006Q8NI28 216 aa3.82□□□□□ -1.8
GABPB1-207ENST00000558335 SMIM11BQ8TCY0 68 aa3.82□□□□□ -1.8
GABPB1-207ENST00000558335 C22orf24Q9Y442 160 aa3.82□□□□□ -1.8
GABPB1-207ENST00000558335 A6NN06 94 aa3.81□□□□□ -1.8
GABPB1-207ENST00000558335 GYPEP15421 78 aa3.81□□□□□ -1.8
GABPB1-207ENST00000558335 ELOF1P60002 83 aaKnown RBP3.81□□□□□ -1.8
GABPB1-207ENST00000558335 MAPK1IP1LQ8NDC0 245 aa3.81□□□□□ -1.8
GABPB1-207ENST00000558335 LINC00167Q96N53 147 aa3.81□□□□□ -1.8
GABPB1-207ENST00000558335 DCHS2Q6V1P9 2916 aa3.81□□□□□ -1.8
GABPB1-207ENST00000558335 NBASA2RRP1 2371 aa3.81□□□□□ -1.8
GABPB1-207ENST00000558335 ANKRD17O75179 2603 aaKnown RBP3.8□□□□□ -1.8
GABPB1-207ENST00000558335 SMG1Q96Q15 3661 aaKnown RBP3.8□□□□□ -1.8
GABPB1-207ENST00000558335 TRAV22A0A0B4J277 110 aa3.8□□□□□ -1.8
GABPB1-207ENST00000558335 A0A1B0GW54 56 aa3.8□□□□□ -1.8
GABPB1-207ENST00000558335 NREPQ16612 68 aa3.8□□□□□ -1.8
GABPB1-207ENST00000558335 LINC00337Q8N6G1 96 aa3.8□□□□□ -1.8
GABPB1-207ENST00000558335 C14orf132Q9NPU4 83 aa3.8□□□□□ -1.8
GABPB1-207ENST00000558335 C19orf73Q9NVV2 129 aa3.8□□□□□ -1.8
GABPB1-207ENST00000558335 SNURFQ9Y675 71 aa3.8□□□□□ -1.8
GABPB1-207ENST00000558335 ASPMQ8IZT6 3477 aa3.79□□□□□ -1.8
GABPB1-207ENST00000558335 ATRXP46100 2492 aa3.79□□□□□ -1.8
GABPB1-207ENST00000558335 IGKV2-28A0A075B6P5 120 aa3.79□□□□□ -1.8
GABPB1-207ENST00000558335 LOC110117498A0A087WWA1 95 aa3.79□□□□□ -1.8
GABPB1-207ENST00000558335 LECT2O14960 151 aa3.79□□□□□ -1.8
GABPB1-207ENST00000558335 IGKV2D-28P01615 120 aa3.79□□□□□ -1.8
GABPB1-207ENST00000558335 GIG44P09565 113 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms