RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 C15orf56Q8N910 161 aa10.77□□□□□ -0.69
PCNX4-213ENST00000556907 EPPK1P58107 5090 aaKnown RBP10.76□□□□□ -0.69
PCNX4-213ENST00000556907 LECT2O14960 151 aa10.76□□□□□ -0.69
PCNX4-213ENST00000556907 KRTAP10-2P60368 255 aa10.76□□□□□ -0.69
PCNX4-213ENST00000556907 SLC25A34Q6PIV7 304 aa10.76□□□□□ -0.69
PCNX4-213ENST00000556907 TTTY13Q9BZ97 58 aa10.76□□□□□ -0.69
PCNX4-213ENST00000556907 PRO1933Q9H354 126 aa10.76□□□□□ -0.69
PCNX4-213ENST00000556907 ZNF815PA8K554 130 aa10.75□□□□□ -0.69
PCNX4-213ENST00000556907 C16orf90A8MZG2 172 aa10.75□□□□□ -0.69
PCNX4-213ENST00000556907 NDUFA1O15239 70 aa10.75□□□□□ -0.69
PCNX4-213ENST00000556907 SPAG11BQ08648 103 aa10.75□□□□□ -0.69
PCNX4-213ENST00000556907 C14orf144Q96I85 54 aa10.75□□□□□ -0.69
PCNX4-213ENST00000556907 UQCR10Q9UDW1 63 aa10.75□□□□□ -0.69
PCNX4-213ENST00000556907 GVQW2A0A096LPI5 108 aaPredicted RBP10.74□□□□□ -0.69
PCNX4-213ENST00000556907 IGLV5-52A0A0A0MRZ9 124 aa10.74□□□□□ -0.69
PCNX4-213ENST00000556907 MYMXA0A1B0GTQ4 84 aa10.74□□□□□ -0.69
PCNX4-213ENST00000556907 CXCL5P42830 114 aa10.74□□□□□ -0.69
PCNX4-213ENST00000556907 KIAA0087Q14695 138 aa10.74□□□□□ -0.69
PCNX4-213ENST00000556907 SFTA2Q6UW10 78 aa10.74□□□□□ -0.69
PCNX4-213ENST00000556907 TOMM7Q9P0U1 55 aa10.74□□□□□ -0.69
PCNX4-213ENST00000556907 NDUFA12Q9UI09 145 aa10.74□□□□□ -0.69
PCNX4-213ENST00000556907 PRSS2P07478 247 aa10.73□□□□□ -0.69
PCNX4-213ENST00000556907 ZNF625Q96I27 306 aaPredicted RBP10.73□□□□□ -0.69
PCNX4-213ENST00000556907 TP73-AS1Q9UF72 201 aa10.73□□□□□ -0.69
PCNX4-213ENST00000556907 MIEN1Q9BRT3 115 aa10.71□□□□□ -0.69
PCNX4-213ENST00000556907 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.7□□□□□ -0.7
PCNX4-213ENST00000556907 F8WDY8 70 aa10.7□□□□□ -0.7
PCNX4-213ENST00000556907 GCSHP23434 173 aa10.7□□□□□ -0.7
PCNX4-213ENST00000556907 HERV-K104P63124 156 aa10.7□□□□□ -0.7
PCNX4-213ENST00000556907 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.69□□□□□ -0.7
PCNX4-213ENST00000556907 CNBPP62633 177 aaKnown RBP10.69□□□□□ -0.7
PCNX4-213ENST00000556907 C6orf226Q5I0X4 101 aa10.69□□□□□ -0.7
PCNX4-213ENST00000556907 C2orf91Q6ZV80 131 aa10.69□□□□□ -0.7
PCNX4-213ENST00000556907 C2orf48Q96LS8 159 aa10.69□□□□□ -0.7
PCNX4-213ENST00000556907 HIGD2BQ4VC39 106 aa10.68□□□□□ -0.7
PCNX4-213ENST00000556907 HIGD1BQ9P298 99 aa10.68□□□□□ -0.7
PCNX4-213ENST00000556907 PKHD1P08F94 4074 aa10.68□□□□□ -0.7
PCNX4-213ENST00000556907 A0A0J9YXY3 114 aa10.67□□□□□ -0.7
PCNX4-213ENST00000556907 ZNF561-AS1K7EIQ3 104 aa10.67□□□□□ -0.7
PCNX4-213ENST00000556907 HNRNPA3P51991 378 aaKnown RBP10.67□□□□□ -0.7
PCNX4-213ENST00000556907 CKS1BP61024 79 aa10.67□□□□□ -0.7
PCNX4-213ENST00000556907 DYNC1H1Q14204 4646 aaKnown RBP10.67□□□□□ -0.7
PCNX4-213ENST00000556907 TIMM17BO60830 172 aa10.66□□□□□ -0.7
PCNX4-213ENST00000556907 C2orf82Q6UX34 121 aa10.66□□□□□ -0.7
PCNX4-213ENST00000556907 SCGB1D4Q6XE38 83 aa10.66□□□□□ -0.7
PCNX4-213ENST00000556907 DNAH5Q8TE73 4624 aa10.66□□□□□ -0.7
PCNX4-213ENST00000556907 DDTP30046 118 aa10.65□□□□□ -0.7
PCNX4-213ENST00000556907 C9orf163Q8N9P6 203 aa10.65□□□□□ -0.7
PCNX4-213ENST00000556907 LINC00526Q96FQ7 95 aa10.65□□□□□ -0.7
PCNX4-213ENST00000556907 CAMK2N2Q96S95 79 aa10.64□□□□□ -0.71
PCNX4-213ENST00000556907 SPANXB1Q9NS25 103 aaPredicted RBP10.64□□□□□ -0.71
PCNX4-213ENST00000556907 BIRC6Q9NR09 4857 aa10.63□□□□□ -0.71
PCNX4-213ENST00000556907 TRBV30A0A0K0K1B3 111 aa10.63□□□□□ -0.71
PCNX4-213ENST00000556907 TMEM238C9JI98 176 aa10.63□□□□□ -0.71
PCNX4-213ENST00000556907 FUSP35637 526 aaKnown RBP eCLIP10.63□□□□□ -0.71
PCNX4-213ENST00000556907 LITAFQ99732 161 aa10.63□□□□□ -0.71
PCNX4-213ENST00000556907 PKIGQ9Y2B9 76 aa10.63□□□□□ -0.71
PCNX4-213ENST00000556907 MEIG1Q5JSS6 88 aa10.62□□□□□ -0.71
PCNX4-213ENST00000556907 C10orf25Q5T742 122 aa10.62□□□□□ -0.71
PCNX4-213ENST00000556907 UNQ6190/PRO20217Q6UXQ8 127 aa10.62□□□□□ -0.71
PCNX4-213ENST00000556907 ERG28Q9UKR5 140 aa10.62□□□□□ -0.71
PCNX4-213ENST00000556907 LINC00587B1AMM8 73 aa10.61□□□□□ -0.71
PCNX4-213ENST00000556907 CDK2AP2O75956 126 aa10.61□□□□□ -0.71
PCNX4-213ENST00000556907 SLPIP03973 132 aa10.61□□□□□ -0.71
PCNX4-213ENST00000556907 KRTAP10-1P60331 282 aa10.61□□□□□ -0.71
PCNX4-213ENST00000556907 SYCNQ0VAF6 134 aa10.61□□□□□ -0.71
PCNX4-213ENST00000556907 Q6ZRU5 148 aa10.61□□□□□ -0.71
PCNX4-213ENST00000556907 SPANXDQ9BXN6 97 aa10.61□□□□□ -0.71
PCNX4-213ENST00000556907 SPANXCQ9NY87 97 aa10.61□□□□□ -0.71
PCNX4-213ENST00000556907 C6orf48Q9UBA6 75 aa10.61□□□□□ -0.71
PCNX4-213ENST00000556907 LRP1BQ9NZR2 4599 aa10.61□□□□□ -0.71
PCNX4-213ENST00000556907 COX17Q14061 63 aa10.6□□□□□ -0.71
PCNX4-213ENST00000556907 TAL2Q16559 108 aa10.6□□□□□ -0.71
PCNX4-213ENST00000556907 RNF151Q2KHN1 245 aa10.6□□□□□ -0.71
PCNX4-213ENST00000556907 CARD19Q96LW7 228 aa10.6□□□□□ -0.71
PCNX4-213ENST00000556907 HSD52Q0P140 79 aa10.59□□□□□ -0.71
PCNX4-213ENST00000556907 CIRBPQ14011 172 aaKnown RBP10.59□□□□□ -0.71
PCNX4-213ENST00000556907 SMIM13P0DJ93 91 aa10.58□□□□□ -0.72
PCNX4-213ENST00000556907 Q6ZVH6 145 aa10.58□□□□□ -0.72
PCNX4-213ENST00000556907 PCP4L1A6NKN8 68 aa10.57□□□□□ -0.72
PCNX4-213ENST00000556907 SDIM1Q6ZPB5 146 aa10.57□□□□□ -0.72
PCNX4-213ENST00000556907 Q6ZSA8 131 aa10.57□□□□□ -0.72
PCNX4-213ENST00000556907 CTAG1AP78358 180 aa10.56□□□□□ -0.72
PCNX4-213ENST00000556907 ADAMTSL4-AS1Q5T5F5 129 aa10.56□□□□□ -0.72
PCNX4-213ENST00000556907 PPDPFQ9H3Y8 114 aa10.56□□□□□ -0.72
PCNX4-213ENST00000556907 C9orf116Q5BN46 136 aaPredicted RBP10.55□□□□□ -0.72
PCNX4-213ENST00000556907 HIST1H4GQ99525 98 aa10.55□□□□□ -0.72
PCNX4-213ENST00000556907 TLX1NBP0CAT3 122 aa10.54□□□□□ -0.72
PCNX4-213ENST00000556907 IFITM1P13164 125 aa10.54□□□□□ -0.72
PCNX4-213ENST00000556907 PFN2P35080 140 aa10.54□□□□□ -0.72
PCNX4-213ENST00000556907 PTTG1IPP53801 180 aa10.54□□□□□ -0.72
PCNX4-213ENST00000556907 LINC00158P58513 81 aa10.54□□□□□ -0.72
PCNX4-213ENST00000556907 SRSF9Q13242 221 aaKnown RBP eCLIP10.54□□□□□ -0.72
PCNX4-213ENST00000556907 LINC01620Q4KN68 170 aa10.54□□□□□ -0.72
PCNX4-213ENST00000556907 MIR7-3HGQ8N6C7 128 aa10.54□□□□□ -0.72
PCNX4-213ENST00000556907 A0A0U1RRA0 63 aa10.53□□□□□ -0.72
PCNX4-213ENST00000556907 NDUFC2-KCTD14E9PQ53 114 aa10.52□□□□□ -0.73
PCNX4-213ENST00000556907 M0R143 59 aa10.52□□□□□ -0.73
PCNX4-213ENST00000556907 CEND1Q8N111 149 aa10.52□□□□□ -0.73
PCNX4-213ENST00000556907 DAND5Q8N907 189 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms