RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 FAM236BA0A1B0GV22 79 aa12.14□□□□□ -0.47
PTPN21-208ENST00000556564 WFDC9Q8NEX5 89 aa12.14□□□□□ -0.47
PTPN21-208ENST00000556564 TSPEAR-AS2P59090 65 aa12.13□□□□□ -0.47
PTPN21-208ENST00000556564 CIRBP-AS1Q8TBR5 109 aa12.13□□□□□ -0.47
PTPN21-208ENST00000556564 MYO9AB2RTY4 2548 aa12.12□□□□□ -0.47
PTPN21-208ENST00000556564 Q6ZRU5 148 aa12.12□□□□□ -0.47
PTPN21-208ENST00000556564 C2orf91Q6ZV80 131 aa12.12□□□□□ -0.47
PTPN21-208ENST00000556564 NDUFC2-KCTD14E9PQ53 114 aa12.12□□□□□ -0.47
PTPN21-208ENST00000556564 MUC7Q8TAX7 377 aa12.11□□□□□ -0.47
PTPN21-208ENST00000556564 USP9XQ93008 2570 aaPredicted RBP12.11□□□□□ -0.47
PTPN21-208ENST00000556564 LINC00310P59036 64 aa12.1□□□□□ -0.47
PTPN21-208ENST00000556564 C10orf25Q5T742 122 aa12.1□□□□□ -0.47
PTPN21-208ENST00000556564 KRTAP10-3P60369 221 aa12.1□□□□□ -0.47
PTPN21-208ENST00000556564 KIF25-AS1Q9Y6Z4 181 aa12.1□□□□□ -0.47
PTPN21-208ENST00000556564 KRTAP10-11P60412 298 aa12.09□□□□□ -0.47
PTPN21-208ENST00000556564 FN1P02751 2386 aaKnown RBP12.09□□□□□ -0.47
PTPN21-208ENST00000556564 MRPL55Q7Z7F7 128 aaKnown RBP12.09□□□□□ -0.47
PTPN21-208ENST00000556564 C2orf48Q96LS8 159 aa12.09□□□□□ -0.47
PTPN21-208ENST00000556564 SDIM1Q6ZPB5 146 aa12.08□□□□□ -0.48
PTPN21-208ENST00000556564 Q8NAQ8 132 aa12.07□□□□□ -0.48
PTPN21-208ENST00000556564 KRTAP1-3Q8IUG1 177 aa12.06□□□□□ -0.48
PTPN21-208ENST00000556564 SS18L2Q9UHA2 77 aa12.06□□□□□ -0.48
PTPN21-208ENST00000556564 ATOX1O00244 68 aa12.06□□□□□ -0.48
PTPN21-208ENST00000556564 NTM-AS1Q6ZSK4 140 aa12.06□□□□□ -0.48
PTPN21-208ENST00000556564 ENHOQ6UWT2 76 aa12.05□□□□□ -0.48
PTPN21-208ENST00000556564 ADAMTSL4-AS1Q5T5F5 129 aa12.05□□□□□ -0.48
PTPN21-208ENST00000556564 POLQO75417 2590 aa12.05□□□□□ -0.48
PTPN21-208ENST00000556564 F8WDY8 70 aa12.04□□□□□ -0.48
PTPN21-208ENST00000556564 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.04□□□□□ -0.48
PTPN21-208ENST00000556564 Q8N3U1 123 aa12.04□□□□□ -0.48
PTPN21-208ENST00000556564 WWC2-AS2Q96NR7 200 aa12.04□□□□□ -0.48
PTPN21-208ENST00000556564 FASNP49327 2511 aaKnown RBP12.04□□□□□ -0.48
PTPN21-208ENST00000556564 MKI67P46013 3256 aaKnown RBP12.03□□□□□ -0.48
PTPN21-208ENST00000556564 NDUFV3P56181 108 aaKnown RBP12.03□□□□□ -0.48
PTPN21-208ENST00000556564 A0A096LNJ9 63 aa12.03□□□□□ -0.48
PTPN21-208ENST00000556564 LINC00315P59091 139 aa12.02□□□□□ -0.49
PTPN21-208ENST00000556564 LST1O00453 97 aa12.02□□□□□ -0.49
PTPN21-208ENST00000556564 LINC00643Q86TS7 51 aa12.02□□□□□ -0.49
PTPN21-208ENST00000556564 K7EIL1 84 aa12.01□□□□□ -0.49
PTPN21-208ENST00000556564 DOPEY1Q5JWR5 2465 aa12.01□□□□□ -0.49
PTPN21-208ENST00000556564 Q9UF83 564 aa12.01□□□□□ -0.49
PTPN21-208ENST00000556564 CASC2Q6XLA1 102 aa12□□□□□ -0.49
PTPN21-208ENST00000556564 LINC00588Q9Y4M8 146 aa12□□□□□ -0.49
PTPN21-208ENST00000556564 USP9YO00507 2555 aaPredicted RBP12□□□□□ -0.49
PTPN21-208ENST00000556564 WFDC13Q8IUB5 93 aa11.99□□□□□ -0.49
PTPN21-208ENST00000556564 H3BNG1 76 aa11.99□□□□□ -0.49
PTPN21-208ENST00000556564 PRLHP81277 87 aa11.98□□□□□ -0.49
PTPN21-208ENST00000556564 A0A087WYN8 130 aa11.98□□□□□ -0.49
PTPN21-208ENST00000556564 NBDYA0A0U1RRE5 68 aa11.98□□□□□ -0.49
PTPN21-208ENST00000556564 LINC01561Q8N1V8 128 aa11.98□□□□□ -0.49
PTPN21-208ENST00000556564 Q8N814 137 aa11.98□□□□□ -0.49
PTPN21-208ENST00000556564 C22orf24Q9Y442 160 aa11.98□□□□□ -0.49
PTPN21-208ENST00000556564 C5orf47Q569G3 176 aa11.97□□□□□ -0.49
PTPN21-208ENST00000556564 Q9BRP9 147 aa11.97□□□□□ -0.49
PTPN21-208ENST00000556564 SMIM20Q8N5G0 67 aa11.97□□□□□ -0.49
PTPN21-208ENST00000556564 C2CD3Q4AC94 2353 aa11.96□□□□□ -0.49
PTPN21-208ENST00000556564 PRYO14603 147 aa11.96□□□□□ -0.49
PTPN21-208ENST00000556564 A8MTW9 85 aa11.96□□□□□ -0.5
PTPN21-208ENST00000556564 CHD9Q3L8U1 2897 aa11.94□□□□□ -0.5
PTPN21-208ENST00000556564 KRTAP1-1Q07627 177 aa11.94□□□□□ -0.5
PTPN21-208ENST00000556564 RTL8CO15255 209 aa11.93□□□□□ -0.5
PTPN21-208ENST00000556564 KLK9Q2XQG4 91 aa11.93□□□□□ -0.5
PTPN21-208ENST00000556564 EPG5Q9HCE0 2579 aa11.92□□□□□ -0.5
PTPN21-208ENST00000556564 B5MCH6 92 aa11.92□□□□□ -0.5
PTPN21-208ENST00000556564 TMEM258P61165 79 aa11.92□□□□□ -0.5
PTPN21-208ENST00000556564 ACANP16112 2415 aa11.92□□□□□ -0.5
PTPN21-208ENST00000556564 C16orf90A8MZG2 172 aa11.92□□□□□ -0.5
PTPN21-208ENST00000556564 SPATA3Q8NHX4 192 aa11.9□□□□□ -0.5
PTPN21-208ENST00000556564 RANBP2P49792 3224 aaKnown RBP11.9□□□□□ -0.5
PTPN21-208ENST00000556564 XGP55808 180 aa11.9□□□□□ -0.5
PTPN21-208ENST00000556564 LAMA3Q16787 3333 aa11.9□□□□□ -0.5
PTPN21-208ENST00000556564 BRCA2P51587 3418 aa11.9□□□□□ -0.5
PTPN21-208ENST00000556564 NDUFC2O95298 119 aa11.9□□□□□ -0.5
PTPN21-208ENST00000556564 C6orf48Q9UBA6 75 aa11.89□□□□□ -0.51
PTPN21-208ENST00000556564 SETD2Q9BYW2 2564 aaPredicted RBP11.89□□□□□ -0.51
PTPN21-208ENST00000556564 SEC61GP60059 68 aa11.88□□□□□ -0.51
PTPN21-208ENST00000556564 ATP5EP2Q5VTU8 51 aa11.88□□□□□ -0.51
PTPN21-208ENST00000556564 IGHV3OR16-9A0A0B4J2B5 98 aa11.88□□□□□ -0.51
PTPN21-208ENST00000556564 MT-ATP8P03928 68 aa11.88□□□□□ -0.51
PTPN21-208ENST00000556564 SMCR5Q8TEV8 140 aa11.87□□□□□ -0.51
PTPN21-208ENST00000556564 CSNK1G2-AS1Q8NCQ2 148 aa11.86□□□□□ -0.51
PTPN21-208ENST00000556564 MTORP42345 2549 aa11.86□□□□□ -0.51
PTPN21-208ENST00000556564 RETNLBQ9BQ08 111 aa11.86□□□□□ -0.51
PTPN21-208ENST00000556564 C19orf73Q9NVV2 129 aa11.86□□□□□ -0.51
PTPN21-208ENST00000556564 IGHV6-1A0A0B4J1U7 121 aa11.85□□□□□ -0.51
PTPN21-208ENST00000556564 FAM19A3Q7Z5A8 133 aa11.85□□□□□ -0.51
PTPN21-208ENST00000556564 LINC01546A6NGU7 62 aa11.85□□□□□ -0.51
PTPN21-208ENST00000556564 PHF5AQ7RTV0 110 aaKnown RBP11.85□□□□□ -0.51
PTPN21-208ENST00000556564 F8P00451 2351 aa11.84□□□□□ -0.51
PTPN21-208ENST00000556564 FAM229AH3BQW9 127 aa11.84□□□□□ -0.51
PTPN21-208ENST00000556564 IGLV5-39A0A0G2JS06 123 aa11.83□□□□□ -0.52
PTPN21-208ENST00000556564 CHTF8P0CG12 524 aa11.83□□□□□ -0.52
PTPN21-208ENST00000556564 FAM30AQ9NZY2 134 aa11.83□□□□□ -0.52
PTPN21-208ENST00000556564 LINC00167Q96N53 147 aa11.83□□□□□ -0.52
PTPN21-208ENST00000556564 DEFB116Q30KQ4 102 aa11.81□□□□□ -0.52
PTPN21-208ENST00000556564 LINC00337Q8N6G1 96 aa11.81□□□□□ -0.52
PTPN21-208ENST00000556564 Q6JHZ5 121 aa11.81□□□□□ -0.52
PTPN21-208ENST00000556564 C20orf197Q8N268 126 aa11.81□□□□□ -0.52
PTPN21-208ENST00000556564 LINC00575Q6W349 94 aa11.8□□□□□ -0.52
PTPN21-208ENST00000556564 A0A087WSZ3 146 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms