RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 DEFB132Q7Z7B7 95 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 FAM223AQ8IWN6 122 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 Q8TAT8 98 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 SMIM11BQ8TCY0 68 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 ZC2HC1AQ96GY0 325 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 USMG5Q96IX5 58 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 GAFA1Q96PS6 74 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 TMEM167BQ9NRX6 74 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 LINC01558Q9Y6Z2 57 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 NFAT5O94916 1531 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 ATP7AQ04656 1500 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 LTN1O94822 1766 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 RGPD4Q7Z3J3 1758 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 DOCK3Q8IZD9 2030 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 RAPGEF6Q8TEU7 1601 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 ABCA5Q8WWZ7 1642 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 CDK5RAP2Q96SN8 1893 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 PHRF1Q9P1Y6 1649 aaKnown RBP0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 EIF2AK4Q9P2K8 1649 aaKnown RBP0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 MYO5CQ9NQX4 1742 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 FOCADQ5VW36 1801 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 KIF13AQ9H1H9 1805 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 MYH3P11055 1940 aa0.4□□□□□ -2.34
SUPT16H-206ENST00000556309 ATG2AQ2TAZ0 1938 aa0.4□□□□□ -2.34
SUPT16H-206ENST00000556309 DENND4CQ5VZ89 1909 aa0.4□□□□□ -2.34
SUPT16H-206ENST00000556309 ZNF142P52746 1687 aaPredicted RBP0.4□□□□□ -2.34
SUPT16H-206ENST00000556309 KIF1AQ12756 1690 aa0.4□□□□□ -2.34
SUPT16H-206ENST00000556309 PPRC1Q5VV67 1664 aaKnown RBP0.4□□□□□ -2.34
SUPT16H-206ENST00000556309 RREB1Q92766 1687 aa0.4□□□□□ -2.34
SUPT16H-206ENST00000556309 ITSN2Q9NZM3 1697 aa0.4□□□□□ -2.34
SUPT16H-206ENST00000556309 FAM208AQ9UK61 1670 aaKnown RBP0.4□□□□□ -2.34
SUPT16H-206ENST00000556309 USP24Q9UPU5 2620 aa0.4□□□□□ -2.34
SUPT16H-206ENST00000556309 RGPD3A6NKT7 1758 aaPredicted RBP0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 LAMB1P07942 1786 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 SNRNP200O75643 2136 aaKnown RBP0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 AHNAKQ09666 5890 aaKnown RBP0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 ABCC6O95255 1503 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 NEXMIFQ5QGS0 1516 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 NUP210LQ5VU65 1888 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 KIAA0556O60303 1618 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 NHSL1Q5SYE7 1610 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 CICQ96RK0 1608 aaPredicted RBP0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 ALKQ9UM73 1620 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 TRGV1A0A0A0MS02 117 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 A0A1B0GU69 56 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 CPSF4LA6NMK7 179 aaKnown RBP0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 CCL22O00626 93 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 SPINT3P49223 89 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 SNRPGP62308 76 aaKnown RBP0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 FXYD3Q14802 87 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 PIGYQ3MUY2 71 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 CSAG1Q6PB30 78 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 C10orf99Q6UWK7 81 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 COX6B2Q6YFQ2 88 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 UBE2DNLQ8IWF7 75 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 PROK2Q9HC23 129 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 LINC00474Q9P2X8 69 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 HILPDAQ9Y5L2 63 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 LRRC37A2A6NM11 1700 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 RGPD1P0DJD0 1748 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 KNDC1Q76NI1 1749 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 LRRIQ1Q96JM4 1722 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 AFDNP55196 1824 aaKnown RBP0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 WNK3Q9BYP7 1800 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 MYH7BA7E2Y1 1941 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 MYH8P13535 1937 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 AKAP11Q9UKA4 1901 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 NWD1Q149M9 1564 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 SAMD9LQ8IVG5 1584 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 SCN3AQ9NY46 2000 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 MROH2AA6NES4 1674 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 C3P01024 1663 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 SHPRHQ149N8 1683 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 ALS2Q96Q42 1657 aa0.4□□□□□ -2.35
SUPT16H-206ENST00000556309 DOCK4Q8N1I0 1966 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 TULP4Q9NRJ4 1543 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 LRP5O75197 1615 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 A0A0G2JMZ2 1700 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 LRRC37AA6NMS7 1700 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 XRN1Q8IZH2 1706 aaKnown RBP0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 IFT172Q9UG01 1749 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 KIAA1549LQ6ZVL6 1849 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 MYH4Q9Y623 1939 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 A0A087WVE0 104 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 DEFB131BA0A096LNP1 70 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 LCE6AA0A183 80 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 ETDCA0A1B0GVM5 59 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 SMIM27A0A1W2PRY6 76 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 I3L3M4 83 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 NDUFA4O00483 81 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 COX7BP24311 80 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 ZNF137PP52743 207 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 FXYD4P59646 89 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 HAMPP81172 84 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 SPATA8Q6RVD6 105 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 ENHOQ6UWT2 76 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 KCNQ1DNQ9H478 68 aa0.39□□□□□ -2.35
SUPT16H-206ENST00000556309 TP53AIP1Q9HCN2 124 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms