RNA–Protein interactions for RNA: ENST00000555824.5

SEL1L-204, Transcript of SEL1L, ERAD E3 ligase adaptor subunit, humanhuman

TSL 1 (best) BASIC

Gene SEL1L, Length 1,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L-204ENST00000555824 A0A0J9YXY3 114 aa11.84□□□□□ -0.51
SEL1L-204ENST00000555824 PCP4L1A6NKN8 68 aa11.84□□□□□ -0.51
SEL1L-204ENST00000555824 NTN5Q8WTR8 489 aaPredicted RBP11.84□□□□□ -0.51
SEL1L-204ENST00000555824 ZNF561-AS1K7EIQ3 104 aa11.83□□□□□ -0.52
SEL1L-204ENST00000555824 CKS1BP61024 79 aa11.83□□□□□ -0.52
SEL1L-204ENST00000555824 SCGB1D4Q6XE38 83 aa11.83□□□□□ -0.52
SEL1L-204ENST00000555824 SACSQ9NZJ4 4579 aa11.83□□□□□ -0.52
SEL1L-204ENST00000555824 DDTP30046 118 aa11.82□□□□□ -0.52
SEL1L-204ENST00000555824 HNRNPA3P51991 378 aaKnown RBP11.82□□□□□ -0.52
SEL1L-204ENST00000555824 C10orf25Q5T742 122 aa11.82□□□□□ -0.52
SEL1L-204ENST00000555824 UNQ6190/PRO20217Q6UXQ8 127 aa11.82□□□□□ -0.52
SEL1L-204ENST00000555824 LCE6AA0A183 80 aa11.81□□□□□ -0.52
SEL1L-204ENST00000555824 CXCL5P42830 114 aa11.81□□□□□ -0.52
SEL1L-204ENST00000555824 HERV-K104P63124 156 aa11.81□□□□□ -0.52
SEL1L-204ENST00000555824 C1orf134Q5TEV5 83 aa11.81□□□□□ -0.52
SEL1L-204ENST00000555824 LRCOL1A6NCL2 159 aa11.8□□□□□ -0.52
SEL1L-204ENST00000555824 HIGD1BQ9P298 99 aa11.8□□□□□ -0.52
SEL1L-204ENST00000555824 SFTA2Q6UW10 78 aa11.79□□□□□ -0.52
SEL1L-204ENST00000555824 C2orf48Q96LS8 159 aa11.79□□□□□ -0.52
SEL1L-204ENST00000555824 SLPIP03973 132 aa11.78□□□□□ -0.52
SEL1L-204ENST00000555824 CAMK2N2Q96S95 79 aa11.78□□□□□ -0.52
SEL1L-204ENST00000555824 LITAFQ99732 161 aa11.78□□□□□ -0.52
SEL1L-204ENST00000555824 CTAG1AP78358 180 aa11.77□□□□□ -0.53
SEL1L-204ENST00000555824 C9orf116Q5BN46 136 aaPredicted RBP11.77□□□□□ -0.53
SEL1L-204ENST00000555824 ADAMTSL4-AS1Q5T5F5 129 aa11.77□□□□□ -0.53
SEL1L-204ENST00000555824 Q6ZRU5 148 aa11.77□□□□□ -0.53
SEL1L-204ENST00000555824 A0A0U1RRA0 63 aa11.76□□□□□ -0.53
SEL1L-204ENST00000555824 SMIM13P0DJ93 91 aa11.76□□□□□ -0.53
SEL1L-204ENST00000555824 MEIG1Q5JSS6 88 aa11.76□□□□□ -0.53
SEL1L-204ENST00000555824 C6orf48Q9UBA6 75 aa11.76□□□□□ -0.53
SEL1L-204ENST00000555824 TIMM17BO60830 172 aa11.75□□□□□ -0.53
SEL1L-204ENST00000555824 FRAS1Q86XX4 4008 aa11.75□□□□□ -0.53
SEL1L-204ENST00000555824 F8WDY8 70 aa11.75□□□□□ -0.53
SEL1L-204ENST00000555824 SYCNQ0VAF6 134 aa11.75□□□□□ -0.53
SEL1L-204ENST00000555824 ERG28Q9UKR5 140 aa11.75□□□□□ -0.53
SEL1L-204ENST00000555824 PFN2P35080 140 aa11.74□□□□□ -0.53
SEL1L-204ENST00000555824 DAND5Q8N907 189 aa11.74□□□□□ -0.53
SEL1L-204ENST00000555824 KMT2CQ8NEZ4 4911 aaKnown RBP11.74□□□□□ -0.53
SEL1L-204ENST00000555824 DNAH17Q9UFH2 4485 aa11.74□□□□□ -0.53
SEL1L-204ENST00000555824 TMEM238C9JI98 176 aa11.73□□□□□ -0.53
SEL1L-204ENST00000555824 CIRBPQ14011 172 aaKnown RBP11.73□□□□□ -0.53
SEL1L-204ENST00000555824 SPANXB1Q9NS25 103 aaPredicted RBP11.73□□□□□ -0.53
SEL1L-204ENST00000555824 A0A087WTM6 91 aa11.72□□□□□ -0.53
SEL1L-204ENST00000555824 TRBV30A0A0K0K1B3 111 aa11.72□□□□□ -0.53
SEL1L-204ENST00000555824 RTL8CO15255 209 aa11.72□□□□□ -0.53
SEL1L-204ENST00000555824 C14orf177Q52M58 125 aa11.72□□□□□ -0.53
SEL1L-204ENST00000555824 LINC00158P58513 81 aa11.71□□□□□ -0.53
SEL1L-204ENST00000555824 SRSF9Q13242 221 aaKnown RBP eCLIP11.71□□□□□ -0.53
SEL1L-204ENST00000555824 HIST1H4GQ99525 98 aa11.71□□□□□ -0.53
SEL1L-204ENST00000555824 LINC00587B1AMM8 73 aa11.71□□□□□ -0.54
SEL1L-204ENST00000555824 CARD19Q96LW7 228 aa11.71□□□□□ -0.54
SEL1L-204ENST00000555824 SPANXDQ9BXN6 97 aa11.71□□□□□ -0.54
SEL1L-204ENST00000555824 SPANXCQ9NY87 97 aa11.71□□□□□ -0.54
SEL1L-204ENST00000555824 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.7□□□□□ -0.54
SEL1L-204ENST00000555824 HSD52Q0P140 79 aa11.7□□□□□ -0.54
SEL1L-204ENST00000555824 COX17Q14061 63 aa11.7□□□□□ -0.54
SEL1L-204ENST00000555824 Q8N814 137 aa11.7□□□□□ -0.54
SEL1L-204ENST00000555824 EIF4EBP3O60516 100 aaPredicted RBP11.69□□□□□ -0.54
SEL1L-204ENST00000555824 MIR7-3HGQ8N6C7 128 aa11.69□□□□□ -0.54
SEL1L-204ENST00000555824 CNBPP62633 177 aaKnown RBP11.68□□□□□ -0.54
SEL1L-204ENST00000555824 TNP2Q05952 138 aa11.68□□□□□ -0.54
SEL1L-204ENST00000555824 TAL2Q16559 108 aa11.68□□□□□ -0.54
SEL1L-204ENST00000555824 RYR2Q92736 4967 aa11.68□□□□□ -0.54
SEL1L-204ENST00000555824 NPC2P61916 151 aa11.68□□□□□ -0.54
SEL1L-204ENST00000555824 RNF151Q2KHN1 245 aa11.68□□□□□ -0.54
SEL1L-204ENST00000555824 HINT1P49773 126 aaPredicted RBP11.67□□□□□ -0.54
SEL1L-204ENST00000555824 Q6ZVH6 145 aa11.67□□□□□ -0.54
SEL1L-204ENST00000555824 MUSTN1Q8IVN3 82 aa11.67□□□□□ -0.54
SEL1L-204ENST00000555824 CEND1Q8N111 149 aa11.67□□□□□ -0.54
SEL1L-204ENST00000555824 GCSHP23434 173 aa11.66□□□□□ -0.54
SEL1L-204ENST00000555824 SOSTDC1Q6X4U4 206 aa11.66□□□□□ -0.54
SEL1L-204ENST00000555824 LINC00308Q8TCZ7 52 aa11.66□□□□□ -0.54
SEL1L-204ENST00000555824 HECTD4Q9Y4D8 3996 aa11.65□□□□□ -0.54
SEL1L-204ENST00000555824 BVES-AS1Q5T3Y7 98 aa11.65□□□□□ -0.54
SEL1L-204ENST00000555824 NDUFC2-KCTD14E9PQ53 114 aa11.64□□□□□ -0.55
SEL1L-204ENST00000555824 PTTG1IPP53801 180 aa11.64□□□□□ -0.55
SEL1L-204ENST00000555824 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.64□□□□□ -0.55
SEL1L-204ENST00000555824 FXYD2P54710 66 aa11.64□□□□□ -0.55
SEL1L-204ENST00000555824 Q6ZRP5 223 aa11.64□□□□□ -0.55
SEL1L-204ENST00000555824 SND1-IT1Q9HBX3 110 aa11.64□□□□□ -0.55
SEL1L-204ENST00000555824 FAT2Q9NYQ8 4349 aa11.63□□□□□ -0.55
SEL1L-204ENST00000555824 IFITM1P13164 125 aa11.63□□□□□ -0.55
SEL1L-204ENST00000555824 TLX1NBP0CAT3 122 aa11.62□□□□□ -0.55
SEL1L-204ENST00000555824 M0R143 59 aa11.61□□□□□ -0.55
SEL1L-204ENST00000555824 FUSP35637 526 aaKnown RBP eCLIP11.61□□□□□ -0.55
SEL1L-204ENST00000555824 SNHG12Q9BXW3 62 aa11.61□□□□□ -0.55
SEL1L-204ENST00000555824 BATFQ16520 125 aa11.6□□□□□ -0.55
SEL1L-204ENST00000555824 C9orf163Q8N9P6 203 aa11.6□□□□□ -0.55
SEL1L-204ENST00000555824 DNAH11Q96DT5 4516 aa11.6□□□□□ -0.55
SEL1L-204ENST00000555824 LOC107984156A0A0G2JMH3 177 aa11.6□□□□□ -0.55
SEL1L-204ENST00000555824 GAGE2EQ4V326 116 aa11.6□□□□□ -0.55
SEL1L-204ENST00000555824 ARL17AQ8IVW1 177 aa11.6□□□□□ -0.55
SEL1L-204ENST00000555824 XAGE1AQ9HD64 81 aa11.6□□□□□ -0.55
SEL1L-204ENST00000555824 GAGE2DQ9UEU5 116 aa11.6□□□□□ -0.55
SEL1L-204ENST00000555824 A4D1N5 150 aa11.59□□□□□ -0.55
SEL1L-204ENST00000555824 RPL24P83731 157 aaKnown RBP11.59□□□□□ -0.55
SEL1L-204ENST00000555824 RPL18AQ02543 176 aaKnown RBP11.59□□□□□ -0.55
SEL1L-204ENST00000555824 LINC01620Q4KN68 170 aa11.59□□□□□ -0.55
SEL1L-204ENST00000555824 LOC107984640A0A0U1RRK4 108 aa11.58□□□□□ -0.56
SEL1L-204ENST00000555824 EREGO14944 169 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms