RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 VAMP3Q15836 100 aa6.78□□□□□ -1.32
HNRNPC-219ENST00000555309 TTC32Q5I0X7 151 aa6.78□□□□□ -1.32
HNRNPC-219ENST00000555309 C10orf126Q8N4M7 172 aa6.78□□□□□ -1.32
HNRNPC-219ENST00000555309 CDKN2A-AS1Q9UH64 79 aa6.78□□□□□ -1.32
HNRNPC-219ENST00000555309 A0A1B0GUV1 79 aa6.77□□□□□ -1.33
HNRNPC-219ENST00000555309 K7ERU9 68 aa6.77□□□□□ -1.33
HNRNPC-219ENST00000555309 TIMM17BO60830 172 aa6.77□□□□□ -1.33
HNRNPC-219ENST00000555309 IGHV3-30P01768 117 aa6.77□□□□□ -1.33
HNRNPC-219ENST00000555309 IGHV3-30-5P0DP03 117 aa6.77□□□□□ -1.33
HNRNPC-219ENST00000555309 SRSF9Q13242 221 aaKnown RBP eCLIP6.77□□□□□ -1.334e-16■■■□□ 16.3
HNRNPC-219ENST00000555309 NHP2Q9NX24 153 aaKnown RBP6.77□□□□□ -1.33
HNRNPC-219ENST00000555309 TRAV8-3A0A0A6YYJ7 113 aa6.76□□□□□ -1.33
HNRNPC-219ENST00000555309 A0A0J9YXY3 114 aa6.76□□□□□ -1.33
HNRNPC-219ENST00000555309 A0A1B0GV72 72 aa6.76□□□□□ -1.33
HNRNPC-219ENST00000555309 RNF151Q2KHN1 245 aa6.76□□□□□ -1.33
HNRNPC-219ENST00000555309 SH2D6Q7Z4S9 175 aa6.76□□□□□ -1.33
HNRNPC-219ENST00000555309 Q8N3U1 123 aa6.76□□□□□ -1.33
HNRNPC-219ENST00000555309 KRTAP4-5Q9BYR2 181 aa6.76□□□□□ -1.33
HNRNPC-219ENST00000555309 NDUFA12Q9UI09 145 aa6.76□□□□□ -1.33
HNRNPC-219ENST00000555309 A0A1W2PPM0 123 aa6.76□□□□□ -1.33
HNRNPC-219ENST00000555309 C16orf90A8MZG2 172 aa6.76□□□□□ -1.33
HNRNPC-219ENST00000555309 SMIM1B2RUZ4 78 aa6.76□□□□□ -1.33
HNRNPC-219ENST00000555309 H3BUT2 72 aa6.76□□□□□ -1.33
HNRNPC-219ENST00000555309 NDUFA1O15239 70 aa6.76□□□□□ -1.33
HNRNPC-219ENST00000555309 CCL25O15444 150 aa6.76□□□□□ -1.33
HNRNPC-219ENST00000555309 COX6A2Q02221 97 aa6.76□□□□□ -1.33
HNRNPC-219ENST00000555309 SPANXDQ9BXN6 97 aa6.76□□□□□ -1.33
HNRNPC-219ENST00000555309 SPANXCQ9NY87 97 aa6.76□□□□□ -1.33
HNRNPC-219ENST00000555309 IGHV3-64A0A075B6Q5 118 aa6.75□□□□□ -1.33
HNRNPC-219ENST00000555309 SPINK8P0C7L1 97 aa6.75□□□□□ -1.33
HNRNPC-219ENST00000555309 DNAH10OSP0CZ25 163 aa6.75□□□□□ -1.33
HNRNPC-219ENST00000555309 GTF2H5Q6ZYL4 71 aa6.75□□□□□ -1.33
HNRNPC-219ENST00000555309 LITAFQ99732 161 aa6.75□□□□□ -1.33
HNRNPC-219ENST00000555309 CHCHD5Q9BSY4 110 aa6.75□□□□□ -1.33
HNRNPC-219ENST00000555309 TRAV13-1A0A0B4J241 112 aa6.74□□□□□ -1.33
HNRNPC-219ENST00000555309 K7EP34 96 aa6.74□□□□□ -1.33
HNRNPC-219ENST00000555309 K7ERJ3 54 aa6.74□□□□□ -1.33
HNRNPC-219ENST00000555309 GAGE6Q13070 117 aa6.74□□□□□ -1.33
HNRNPC-219ENST00000555309 OCIAD2Q56VL3 154 aa6.74□□□□□ -1.33
HNRNPC-219ENST00000555309 RAB37Q96AX2 223 aa6.74□□□□□ -1.33
HNRNPC-219ENST00000555309 PPDPFQ9H3Y8 114 aa6.74□□□□□ -1.33
HNRNPC-219ENST00000555309 FAT1Q14517 4588 aa6.73□□□□□ -1.33
HNRNPC-219ENST00000555309 IGLV4-60A0A075B6I1 120 aa6.73□□□□□ -1.33
HNRNPC-219ENST00000555309 FABP2P12104 132 aa6.73□□□□□ -1.33
HNRNPC-219ENST00000555309 RPL24P83731 157 aaKnown RBP6.73□□□□□ -1.33
HNRNPC-219ENST00000555309 GAGE10A6NGK3 116 aa6.73□□□□□ -1.33
HNRNPC-219ENST00000555309 IGHV3-33P01772 117 aa6.73□□□□□ -1.33
HNRNPC-219ENST00000555309 LINC01561Q8N1V8 128 aa6.73□□□□□ -1.33
HNRNPC-219ENST00000555309 IGHV3OR16-9A0A0B4J2B5 98 aa6.72□□□□□ -1.33
HNRNPC-219ENST00000555309 A0A0B4J2C4 111 aa6.72□□□□□ -1.33
HNRNPC-219ENST00000555309 IFITM1P13164 125 aa6.72□□□□□ -1.33
HNRNPC-219ENST00000555309 HERV-K104P63124 156 aa6.72□□□□□ -1.33
HNRNPC-219ENST00000555309 MTURNQ8N3F0 131 aa6.72□□□□□ -1.33
HNRNPC-219ENST00000555309 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.71□□□□□ -1.34
HNRNPC-219ENST00000555309 MIAQ16674 131 aa6.71□□□□□ -1.34
HNRNPC-219ENST00000555309 SFTA2Q6UW10 78 aa6.71□□□□□ -1.34
HNRNPC-219ENST00000555309 ZNF625Q96I27 306 aaPredicted RBP6.71□□□□□ -1.34
HNRNPC-219ENST00000555309 SPCS1Q9Y6A9 102 aa6.71□□□□□ -1.34
HNRNPC-219ENST00000555309 DNAH8Q96JB1 4490 aa6.71□□□□□ -1.34
HNRNPC-219ENST00000555309 A0A087WZ39 114 aa6.7□□□□□ -1.34
HNRNPC-219ENST00000555309 LINC00959A0A1B0GUT2 108 aa6.7□□□□□ -1.34
HNRNPC-219ENST00000555309 LELP1Q5T871 98 aa6.7□□□□□ -1.34
HNRNPC-219ENST00000555309 Q9HAA7 133 aa6.7□□□□□ -1.34
HNRNPC-219ENST00000555309 A0A087WTM6 91 aa6.7□□□□□ -1.34
HNRNPC-219ENST00000555309 CFC1BP0CG36 223 aa6.7□□□□□ -1.34
HNRNPC-219ENST00000555309 CFC1P0CG37 223 aa6.7□□□□□ -1.34
HNRNPC-219ENST00000555309 CIRBPQ14011 172 aaKnown RBP6.7□□□□□ -1.34
HNRNPC-219ENST00000555309 LINC01556Q5JQF7 62 aa6.7□□□□□ -1.34
HNRNPC-219ENST00000555309 MUSTN1Q8IVN3 82 aa6.7□□□□□ -1.34
HNRNPC-219ENST00000555309 A4D1N5 150 aa6.69□□□□□ -1.34
HNRNPC-219ENST00000555309 COPS9Q8WXC6 57 aa6.69□□□□□ -1.34
HNRNPC-219ENST00000555309 NAA38Q9BRA0 125 aaKnown RBP6.69□□□□□ -1.34
HNRNPC-219ENST00000555309 PGPEP1Q9NXJ5 209 aa6.69□□□□□ -1.34
HNRNPC-219ENST00000555309 PRO1854Q9UHT4 67 aa6.69□□□□□ -1.34
HNRNPC-219ENST00000555309 IBA57-AS1B1ANH7 110 aa6.68□□□□□ -1.34
HNRNPC-219ENST00000555309 TSPAN13O95857 204 aa6.68□□□□□ -1.34
HNRNPC-219ENST00000555309 SS18Q15532 418 aa6.68□□□□□ -1.34
HNRNPC-219ENST00000555309 ADAMTSL4-AS1Q5T5F5 129 aa6.68□□□□□ -1.34
HNRNPC-219ENST00000555309 LYRM7Q5U5X0 104 aa6.68□□□□□ -1.34
HNRNPC-219ENST00000555309 WFDC2Q14508 124 aa6.67□□□□□ -1.34
HNRNPC-219ENST00000555309 COX7B2Q8TF08 81 aa6.67□□□□□ -1.34
HNRNPC-219ENST00000555309 LRCOL1A6NCL2 159 aa6.67□□□□□ -1.34
HNRNPC-219ENST00000555309 TMEM262E9PQX1 116 aa6.67□□□□□ -1.34
HNRNPC-219ENST00000555309 APOMO95445 188 aa6.67□□□□□ -1.34
HNRNPC-219ENST00000555309 KRTAP10-1P60331 282 aa6.67□□□□□ -1.34
HNRNPC-219ENST00000555309 EIF4EBP3O60516 100 aaPredicted RBP6.66□□□□□ -1.34
HNRNPC-219ENST00000555309 CDK2AP2O75956 126 aa6.66□□□□□ -1.34
HNRNPC-219ENST00000555309 HAMPP81172 84 aa6.65□□□□□ -1.34
HNRNPC-219ENST00000555309 CD164L2Q6UWJ8 174 aa6.65□□□□□ -1.34
HNRNPC-219ENST00000555309 LECT2O14960 151 aa6.64□□□□□ -1.35
HNRNPC-219ENST00000555309 Q8IZM0 81 aa6.64□□□□□ -1.35
HNRNPC-219ENST00000555309 LINC00308Q8TCZ7 52 aa6.64□□□□□ -1.35
HNRNPC-219ENST00000555309 PRR34Q9NV39 138 aa6.64□□□□□ -1.35
HNRNPC-219ENST00000555309 TRBV20-1A0A075B6N2 111 aa6.64□□□□□ -1.35
HNRNPC-219ENST00000555309 IGKV3OR2-268A0A0C4DH90 116 aa6.64□□□□□ -1.35
HNRNPC-219ENST00000555309 PSCAO43653 123 aa6.64□□□□□ -1.35
HNRNPC-219ENST00000555309 PRSS2P07478 247 aa6.64□□□□□ -1.35
HNRNPC-219ENST00000555309 XGP55808 180 aa6.64□□□□□ -1.35
HNRNPC-219ENST00000555309 REG3AQ06141 175 aa6.64□□□□□ -1.35
HNRNPC-219ENST00000555309 F8W1H4 67 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms