RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 HERV-K104P63124 156 aa13.25□□□□□ -0.29
SSH1-209ENST00000551165 SOSTDC1Q6X4U4 206 aa13.25□□□□□ -0.29
SSH1-209ENST00000551165 RPL24P83731 157 aaKnown RBP13.24□□□□□ -0.29
SSH1-209ENST00000551165 CIRBPQ14011 172 aaKnown RBP13.24□□□□□ -0.29
SSH1-209ENST00000551165 A0A1W2PPM0 123 aa13.24□□□□□ -0.29
SSH1-209ENST00000551165 PCP4P48539 62 aa13.24□□□□□ -0.29
SSH1-209ENST00000551165 LINC01556Q5JQF7 62 aa13.24□□□□□ -0.29
SSH1-209ENST00000551165 LINC00526Q96FQ7 95 aa13.24□□□□□ -0.29
SSH1-209ENST00000551165 PGPEP1Q9NXJ5 209 aa13.24□□□□□ -0.29
SSH1-209ENST00000551165 CBY1Q9Y3M2 126 aa13.24□□□□□ -0.29
SSH1-209ENST00000551165 Q8IZM0 81 aa13.23□□□□□ -0.29
SSH1-209ENST00000551165 LINC01561Q8N1V8 128 aa13.23□□□□□ -0.29
SSH1-209ENST00000551165 LINC00308Q8TCZ7 52 aa13.23□□□□□ -0.29
SSH1-209ENST00000551165 SFTA2Q6UW10 78 aa13.22□□□□□ -0.29
SSH1-209ENST00000551165 KRTAP26-1Q6PEX3 210 aa13.22□□□□□ -0.29
SSH1-209ENST00000551165 UBE2V1Q13404 147 aa13.21□□□□□ -0.29
SSH1-209ENST00000551165 TSPAN13O95857 204 aa13.21□□□□□ -0.3
SSH1-209ENST00000551165 PFN2P35080 140 aa13.21□□□□□ -0.3
SSH1-209ENST00000551165 C6orf223Q8N319 242 aa13.21□□□□□ -0.3
SSH1-209ENST00000551165 DNAH10OSP0CZ25 163 aa13.2□□□□□ -0.3
SSH1-209ENST00000551165 MIR7-3HGQ8N6C7 128 aa13.2□□□□□ -0.3
SSH1-209ENST00000551165 TRAV8-4A0A0B4J246 113 aa13.19□□□□□ -0.3
SSH1-209ENST00000551165 CCL18P55774 89 aa13.18□□□□□ -0.3
SSH1-209ENST00000551165 LINC00158P58513 81 aa13.18□□□□□ -0.3
SSH1-209ENST00000551165 PRO1854Q9UHT4 67 aa13.18□□□□□ -0.3
SSH1-209ENST00000551165 IFITM1P13164 125 aa13.18□□□□□ -0.3
SSH1-209ENST00000551165 H7C2G1 150 aa13.17□□□□□ -0.3
SSH1-209ENST00000551165 CKS1BP61024 79 aa13.17□□□□□ -0.3
SSH1-209ENST00000551165 TENM2Q9NT68 2774 aa13.17□□□□□ -0.3
SSH1-209ENST00000551165 Q9HAA7 133 aa13.17□□□□□ -0.3
SSH1-209ENST00000551165 ERG28Q9UKR5 140 aa13.17□□□□□ -0.3
SSH1-209ENST00000551165 A0A0B4J2C4 111 aa13.16□□□□□ -0.3
SSH1-209ENST00000551165 FABP2P12104 132 aa13.16□□□□□ -0.3
SSH1-209ENST00000551165 C9orf116Q5BN46 136 aaPredicted RBP13.16□□□□□ -0.3
SSH1-209ENST00000551165 C10orf25Q5T742 122 aa13.16□□□□□ -0.3
SSH1-209ENST00000551165 KLK5Q9Y337 293 aaPredicted RBP13.16□□□□□ -0.3
SSH1-209ENST00000551165 GAGE10A6NGK3 116 aa13.16□□□□□ -0.3
SSH1-209ENST00000551165 SPAG11BQ08648 103 aa13.16□□□□□ -0.3
SSH1-209ENST00000551165 CFAP161Q6P656 301 aa13.16□□□□□ -0.3
SSH1-209ENST00000551165 SPCS1Q9Y6A9 102 aa13.16□□□□□ -0.3
SSH1-209ENST00000551165 DYNC2H1Q8NCM8 4307 aaKnown RBP13.16□□□□□ -0.3
SSH1-209ENST00000551165 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.15□□□□□ -0.3
SSH1-209ENST00000551165 IBA57-AS1B1ANH7 110 aa13.15□□□□□ -0.3
SSH1-209ENST00000551165 NHLRC4P0CG21 123 aaPredicted RBP13.15□□□□□ -0.3
SSH1-209ENST00000551165 DNAH1Q9P2D7 4330 aa13.14□□□□□ -0.31
SSH1-209ENST00000551165 K7EP34 96 aa13.14□□□□□ -0.31
SSH1-209ENST00000551165 UNQ6190/PRO20217Q6UXQ8 127 aa13.14□□□□□ -0.31
SSH1-209ENST00000551165 IGKV2D-24A0A075B6R9 120 aa13.14□□□□□ -0.31
SSH1-209ENST00000551165 APLNQ9ULZ1 77 aa13.13□□□□□ -0.31
SSH1-209ENST00000551165 DNAH7Q8WXX0 4024 aa13.13□□□□□ -0.31
SSH1-209ENST00000551165 HIGD2BQ4VC39 106 aa13.13□□□□□ -0.31
SSH1-209ENST00000551165 C1orf43Q9BWL3 253 aa13.12□□□□□ -0.31
SSH1-209ENST00000551165 PLECQ15149 4684 aaKnown RBP13.11□□□□□ -0.31
SSH1-209ENST00000551165 LOC107984156A0A0G2JMH3 177 aa13.1□□□□□ -0.31
SSH1-209ENST00000551165 KRTAP21-3Q3LHN1 58 aa13.1□□□□□ -0.31
SSH1-209ENST00000551165 ARL17AQ8IVW1 177 aa13.1□□□□□ -0.31
SSH1-209ENST00000551165 C15orf56Q8N910 161 aa13.1□□□□□ -0.31
SSH1-209ENST00000551165 UPK3BQ9BT76 320 aa13.1□□□□□ -0.31
SSH1-209ENST00000551165 CXCL5P42830 114 aa13.09□□□□□ -0.31
SSH1-209ENST00000551165 CASC10Q5T4H9 136 aa13.08□□□□□ -0.32
SSH1-209ENST00000551165 GTF2H5Q6ZYL4 71 aa13.08□□□□□ -0.32
SSH1-209ENST00000551165 NTN5Q8WTR8 489 aaPredicted RBP13.08□□□□□ -0.32
SSH1-209ENST00000551165 STARD9Q9P2P6 4700 aa13.07□□□□□ -0.32
SSH1-209ENST00000551165 Q1RN00 199 aa13.07□□□□□ -0.32
SSH1-209ENST00000551165 SND1-IT1Q9HBX3 110 aa13.07□□□□□ -0.32
SSH1-209ENST00000551165 FBN3Q75N90 2809 aa13.06□□□□□ -0.32
SSH1-209ENST00000551165 RPL13AP40429 203 aaKnown RBP13.06□□□□□ -0.32
SSH1-209ENST00000551165 KRTAP1-5Q9BYS1 174 aa13.06□□□□□ -0.32
SSH1-209ENST00000551165 IGKV2-28A0A075B6P5 120 aa13.06□□□□□ -0.32
SSH1-209ENST00000551165 H3BMG7 143 aa13.06□□□□□ -0.32
SSH1-209ENST00000551165 IGKV2D-28P01615 120 aa13.06□□□□□ -0.32
SSH1-209ENST00000551165 PSMB2P49721 201 aa13.05□□□□□ -0.32
SSH1-209ENST00000551165 COPS9Q8WXC6 57 aa13.05□□□□□ -0.32
SSH1-209ENST00000551165 C6orf48Q9UBA6 75 aa13.05□□□□□ -0.32
SSH1-209ENST00000551165 TRIAP1O43715 76 aa13.03□□□□□ -0.32
SSH1-209ENST00000551165 ZNF561-AS1K7EIQ3 104 aa13.03□□□□□ -0.32
SSH1-209ENST00000551165 MTURNQ8N3F0 131 aa13.03□□□□□ -0.32
SSH1-209ENST00000551165 LINC00337Q8N6G1 96 aa13.03□□□□□ -0.32
SSH1-209ENST00000551165 TCL1BO95988 128 aa13.02□□□□□ -0.33
SSH1-209ENST00000551165 UBE2DNLQ8IWF7 75 aa13.02□□□□□ -0.33
SSH1-209ENST00000551165 PPDPFQ9H3Y8 114 aa13.02□□□□□ -0.33
SSH1-209ENST00000551165 DNAH10Q8IVF4 4471 aa13.01□□□□□ -0.33
SSH1-209ENST00000551165 SCGB1C2P0DMR2 95 aa13.01□□□□□ -0.33
SSH1-209ENST00000551165 PRR3P79522 188 aaKnown RBP13.01□□□□□ -0.33
SSH1-209ENST00000551165 COX17Q14061 63 aa13.01□□□□□ -0.33
SSH1-209ENST00000551165 Q8NDZ9 215 aa13.01□□□□□ -0.33
SSH1-209ENST00000551165 NUPR2A6NF83 97 aa13□□□□□ -0.33
SSH1-209ENST00000551165 Q6ZRU5 148 aa13□□□□□ -0.33
SSH1-209ENST00000551165 CAMK2N2Q96S95 79 aa13□□□□□ -0.33
SSH1-209ENST00000551165 TRBV30A0A0K0K1B3 111 aa12.98□□□□□ -0.33
SSH1-209ENST00000551165 LECT2O14960 151 aa12.98□□□□□ -0.33
SSH1-209ENST00000551165 GVQW2A0A096LPI5 108 aaPredicted RBP12.97□□□□□ -0.33
SSH1-209ENST00000551165 TGP01266 2768 aa12.95□□□□□ -0.34
SSH1-209ENST00000551165 USP17L23D6RBM5 183 aa12.95□□□□□ -0.34
SSH1-209ENST00000551165 SLPIP03973 132 aa12.94□□□□□ -0.34
SSH1-209ENST00000551165 XAGE1AQ9HD64 81 aa12.94□□□□□ -0.34
SSH1-209ENST00000551165 PRO0461Q9UI25 63 aa12.94□□□□□ -0.34
SSH1-209ENST00000551165 WFDC2Q14508 124 aa12.93□□□□□ -0.34
SSH1-209ENST00000551165 CLEC2BQ92478 149 aa12.93□□□□□ -0.34
SSH1-209ENST00000551165 C2orf48Q96LS8 159 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms