RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 NDUFC2-KCTD14E9PQ53 114 aa4.5□□□□□ -1.69
SNHG1-225ENST00000545920 PRM2P04554 102 aa4.5□□□□□ -1.69
SNHG1-225ENST00000545920 TMEM258P61165 79 aa4.5□□□□□ -1.69
SNHG1-225ENST00000545920 KRTAP1-1Q07627 177 aa4.5□□□□□ -1.69
SNHG1-225ENST00000545920 SERP2Q8N6R1 65 aa4.5□□□□□ -1.69
SNHG1-225ENST00000545920 TOMM7Q9P0U1 55 aa4.5□□□□□ -1.69
SNHG1-225ENST00000545920 DOPEY1Q5JWR5 2465 aa4.5□□□□□ -1.69
SNHG1-225ENST00000545920 HRNRQ86YZ3 2850 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-225ENST00000545920 BOD1L1Q8NFC6 3051 aa4.49□□□□□ -1.69
SNHG1-225ENST00000545920 hADV29S1A0JD25 119 aa4.49□□□□□ -1.69
SNHG1-225ENST00000545920 J3KT08 172 aa4.49□□□□□ -1.69
SNHG1-225ENST00000545920 LECT2O14960 151 aa4.49□□□□□ -1.69
SNHG1-225ENST00000545920 CD164L2Q6UWJ8 174 aa4.49□□□□□ -1.69
SNHG1-225ENST00000545920 LYPD5Q6UWN5 251 aa4.49□□□□□ -1.69
SNHG1-225ENST00000545920 SMIM20Q8N5G0 67 aa4.49□□□□□ -1.69
SNHG1-225ENST00000545920 PRO0255Q9UI72 69 aa4.49□□□□□ -1.69
SNHG1-225ENST00000545920 IGF2RP11717 2491 aa4.48□□□□□ -1.69
SNHG1-225ENST00000545920 IGLV4-60A0A075B6I1 120 aa4.48□□□□□ -1.69
SNHG1-225ENST00000545920 A0A087WYN8 130 aa4.48□□□□□ -1.69
SNHG1-225ENST00000545920 LOC100131303A0A0U1RQF7 123 aa4.48□□□□□ -1.69
SNHG1-225ENST00000545920 C2orf48Q96LS8 159 aa4.48□□□□□ -1.69
SNHG1-225ENST00000545920 Q9HAA7 133 aa4.48□□□□□ -1.69
SNHG1-225ENST00000545920 CFAP47Q6ZTR5 3102 aa4.48□□□□□ -1.69
SNHG1-225ENST00000545920 CREBBPQ92793 2442 aa4.48□□□□□ -1.69
SNHG1-225ENST00000545920 LOC110117498A0A087WWA1 95 aa4.47□□□□□ -1.69
SNHG1-225ENST00000545920 Q8N814 137 aa4.47□□□□□ -1.69
SNHG1-225ENST00000545920 OR13C6PQ8NH95 151 aa4.47□□□□□ -1.69
SNHG1-225ENST00000545920 NRGNQ92686 78 aa4.47□□□□□ -1.69
SNHG1-225ENST00000545920 UBL5Q9BZL1 73 aa4.47□□□□□ -1.69
SNHG1-225ENST00000545920 SMG1Q96Q15 3661 aaKnown RBP4.47□□□□□ -1.69
SNHG1-225ENST00000545920 ATRXP46100 2492 aa4.47□□□□□ -1.69
SNHG1-225ENST00000545920 DMXL1Q9Y485 3027 aa4.46□□□□□ -1.69
SNHG1-225ENST00000545920 GVQW2A0A096LPI5 108 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-225ENST00000545920 TRBV7-6A0A0J9YX20 115 aa4.46□□□□□ -1.7
SNHG1-225ENST00000545920 MAPK1IP1LQ8NDC0 245 aa4.46□□□□□ -1.7
SNHG1-225ENST00000545920 LINC01006Q8NI28 216 aa4.46□□□□□ -1.7
SNHG1-225ENST00000545920 C14orf132Q9NPU4 83 aa4.46□□□□□ -1.7
SNHG1-225ENST00000545920 LINC00846Q9NV44 126 aa4.46□□□□□ -1.7
SNHG1-225ENST00000545920 CSPG4Q6UVK1 2322 aa4.45□□□□□ -1.7
SNHG1-225ENST00000545920 KALRNO60229 2985 aa4.45□□□□□ -1.7
SNHG1-225ENST00000545920 A0A0J9YWU9 116 aa4.45□□□□□ -1.7
SNHG1-225ENST00000545920 F8WDY8 70 aa4.45□□□□□ -1.7
SNHG1-225ENST00000545920 IGHV4-30-4P0DP06 118 aa4.45□□□□□ -1.7
SNHG1-225ENST00000545920 PFN2P35080 140 aa4.45□□□□□ -1.7
SNHG1-225ENST00000545920 KIAA0087Q14695 138 aa4.45□□□□□ -1.7
SNHG1-225ENST00000545920 ATMQ13315 3056 aa4.44□□□□□ -1.7
SNHG1-225ENST00000545920 RPL35AP18077 110 aaKnown RBP4.44□□□□□ -1.7
SNHG1-225ENST00000545920 HILS1P60008 231 aa4.44□□□□□ -1.7
SNHG1-225ENST00000545920 LINC00575Q6W349 94 aa4.44□□□□□ -1.7
SNHG1-225ENST00000545920 C6orf223Q8N319 242 aa4.44□□□□□ -1.7
SNHG1-225ENST00000545920 DMXL2Q8TDJ6 3036 aa4.44□□□□□ -1.7
SNHG1-225ENST00000545920 LOC107984640A0A0U1RRK4 108 aa4.43□□□□□ -1.7
SNHG1-225ENST00000545920 NCR3O14931 201 aa4.43□□□□□ -1.7
SNHG1-225ENST00000545920 XCL1P47992 114 aa4.43□□□□□ -1.7
SNHG1-225ENST00000545920 APOC4P55056 127 aa4.43□□□□□ -1.7
SNHG1-225ENST00000545920 NANOS2P60321 138 aaKnown RBP4.43□□□□□ -1.7
SNHG1-225ENST00000545920 RBM3P98179 157 aaKnown RBP4.43□□□□□ -1.7
SNHG1-225ENST00000545920 C9orf66Q5T8R8 295 aa4.43□□□□□ -1.7
SNHG1-225ENST00000545920 CHCHD10Q8WYQ3 142 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-225ENST00000545920 UPK3BQ9BT76 320 aa4.43□□□□□ -1.7
SNHG1-225ENST00000545920 ESM1Q9NQ30 184 aa4.43□□□□□ -1.7
SNHG1-225ENST00000545920 SORL1Q92673 2214 aa4.42□□□□□ -1.7
SNHG1-225ENST00000545920 IGKV3OR2-268A0A0C4DH90 116 aa4.42□□□□□ -1.7
SNHG1-225ENST00000545920 IGLV6-57P01721 117 aa4.42□□□□□ -1.7
SNHG1-225ENST00000545920 MIFP14174 115 aa4.42□□□□□ -1.7
SNHG1-225ENST00000545920 CXCL6P80162 114 aa4.42□□□□□ -1.7
SNHG1-225ENST00000545920 REG3AQ06141 175 aa4.42□□□□□ -1.7
SNHG1-225ENST00000545920 LELP1Q5T871 98 aa4.42□□□□□ -1.7
SNHG1-225ENST00000545920 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-225ENST00000545920 ZNF843Q8N446 348 aa4.42□□□□□ -1.7
SNHG1-225ENST00000545920 CR1P17927 2039 aa4.41□□□□□ -1.7
SNHG1-225ENST00000545920 MAST4O15021 2626 aa4.41□□□□□ -1.7
SNHG1-225ENST00000545920 TRAV7A0A075B6U4 112 aa4.41□□□□□ -1.7
SNHG1-225ENST00000545920 IGKV3D-7A0A0C4DH55 119 aa4.41□□□□□ -1.7
SNHG1-225ENST00000545920 A0A1B0GW54 56 aa4.41□□□□□ -1.7
SNHG1-225ENST00000545920 DEFB130BP0DP73 79 aa4.41□□□□□ -1.7
SNHG1-225ENST00000545920 DEFB130AP0DP74 79 aa4.41□□□□□ -1.7
SNHG1-225ENST00000545920 PLA2G2AP14555 144 aa4.41□□□□□ -1.7
SNHG1-225ENST00000545920 Q6ZQT0 140 aa4.41□□□□□ -1.7
SNHG1-225ENST00000545920 DSCR8Q96T75 97 aa4.41□□□□□ -1.7
SNHG1-225ENST00000545920 ASPMQ8IZT6 3477 aa4.4□□□□□ -1.7
SNHG1-225ENST00000545920 NDUFC1O43677 76 aa4.4□□□□□ -1.71
SNHG1-225ENST00000545920 ATP5EP56381 51 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-225ENST00000545920 KRTAP10-9P60411 292 aa4.4□□□□□ -1.71
SNHG1-225ENST00000545920 C6orf99Q4VX62 202 aa4.4□□□□□ -1.71
SNHG1-225ENST00000545920 C5orf47Q569G3 176 aa4.4□□□□□ -1.71
SNHG1-225ENST00000545920 PRR34Q9NV39 138 aa4.4□□□□□ -1.71
SNHG1-225ENST00000545920 DCHS2Q6V1P9 2916 aa4.4□□□□□ -1.71
SNHG1-225ENST00000545920 TACC2O95359 2948 aa4.39□□□□□ -1.71
SNHG1-225ENST00000545920 LRBAP50851 2863 aa4.39□□□□□ -1.71
SNHG1-225ENST00000545920 SPG11Q96JI7 2443 aa4.39□□□□□ -1.71
SNHG1-225ENST00000545920 H3BNG1 76 aa4.39□□□□□ -1.71
SNHG1-225ENST00000545920 ANGP03950 147 aaKnown RBP4.39□□□□□ -1.71
SNHG1-225ENST00000545920 DAD1P61803 113 aa4.39□□□□□ -1.71
SNHG1-225ENST00000545920 SPAG11BQ08648 103 aa4.39□□□□□ -1.71
SNHG1-225ENST00000545920 C9orf129Q5T035 196 aaKnown RBP4.39□□□□□ -1.71
SNHG1-225ENST00000545920 LINC00269Q8N2A0 174 aa4.39□□□□□ -1.71
SNHG1-225ENST00000545920 DIRC1Q969H9 104 aa4.39□□□□□ -1.71
SNHG1-225ENST00000545920 DPH3Q96FX2 82 aa4.39□□□□□ -1.71
SNHG1-225ENST00000545920 ERC2-IT1O76042 136 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms