RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-222	ENST00000545308	IMUP	Q9GZP8	106 aa		1.82	□□□□□ -2.12
SNHG1-222	ENST00000545308	PKHD1L1	Q86WI1	4243 aa		1.82	□□□□□ -2.12
SNHG1-222	ENST00000545308		A0A087WWC5	75 aa		1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	TCL1B	O95988	128 aa		1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	PMP2	P02689	132 aa		1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	FXYD2	P54710	66 aa		1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	KRTAP10-4	P60372	401 aa	Predicted RBP	1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	GNG5	P63218	68 aa		1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	HIST1H1A	Q02539	215 aa	Predicted RBP	1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	ZNF846	Q147U1	533 aa		1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	SCGB2B2	Q4G0G5	96 aa		1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	SPINK6	Q6UWN8	80 aa		1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	OR5A1	Q8NGJ0	315 aa		1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	TERB2	Q8NHR7	220 aa		1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	ZCCHC13	Q8WW36	166 aa	Known RBP	1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	S100A16	Q96FQ6	103 aa	Known RBP	1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	ZC2HC1A	Q96GY0	325 aa		1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	ODF3	Q96PU9	254 aa		1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	TRGV9	Q99603	122 aa		1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	HIST1H2BL	Q99880	126 aa		1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	SLC50A1	Q9BRV3	221 aa		1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	PRADC1	Q9BSG0	188 aa		1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	TIMM21	Q9BVV7	248 aa		1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	LYRM2	Q9NU23	88 aa	Predicted RBP	1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	SS18L2	Q9UHA2	77 aa		1.81	□□□□□ -2.12
SNHG1-222	ENST00000545308	TRBV19	A0A075B6N1	114 aa		1.8	□□□□□ -2.12
SNHG1-222	ENST00000545308	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	1.8	□□□□□ -2.12
SNHG1-222	ENST00000545308	SMIM31	A0A1B0GVY4	71 aa		1.8	□□□□□ -2.12
SNHG1-222	ENST00000545308	CEBPZOS	A8MTT3	80 aa		1.8	□□□□□ -2.12
SNHG1-222	ENST00000545308	SPINK4	O60575	86 aa		1.8	□□□□□ -2.12
SNHG1-222	ENST00000545308	GPX1	P07203	203 aa		1.8	□□□□□ -2.12
SNHG1-222	ENST00000545308	NMB	P08949	121 aa		1.8	□□□□□ -2.12
SNHG1-222	ENST00000545308	OR10J4	P0C629	311 aa		1.8	□□□□□ -2.12
SNHG1-222	ENST00000545308	AQP4	P55087	323 aa		1.8	□□□□□ -2.12
SNHG1-222	ENST00000545308	LELP1	Q5T871	98 aa		1.8	□□□□□ -2.12
SNHG1-222	ENST00000545308	LCN15	Q6UWW0	184 aa		1.8	□□□□□ -2.12
SNHG1-222	ENST00000545308	LCA10	Q71F78	164 aa		1.8	□□□□□ -2.12
SNHG1-222	ENST00000545308	WFDC10B	Q8IUB3	73 aa		1.8	□□□□□ -2.12
SNHG1-222	ENST00000545308	C8orf59	Q8N0T1	100 aa	Predicted RBP	1.8	□□□□□ -2.12
SNHG1-222	ENST00000545308	SMIM20	Q8N5G0	67 aa		1.8	□□□□□ -2.12
SNHG1-222	ENST00000545308	SPACA4	Q8TDM5	124 aa		1.8	□□□□□ -2.12
SNHG1-222	ENST00000545308	CRCT1	Q9UGL9	99 aa		1.8	□□□□□ -2.12
SNHG1-222	ENST00000545308	TPRKB	Q9Y3C4	175 aa		1.8	□□□□□ -2.12
SNHG1-222	ENST00000545308	TRAV4	A0A0B4J268	109 aa		1.79	□□□□□ -2.12
SNHG1-222	ENST00000545308	TRAV12-3	A0A0B4J271	114 aa		1.79	□□□□□ -2.12
SNHG1-222	ENST00000545308	C3orf85	A0A1B0GTC6	90 aa		1.79	□□□□□ -2.12
SNHG1-222	ENST00000545308	C7orf71	A4D174	169 aa		1.79	□□□□□ -2.12
SNHG1-222	ENST00000545308	HYPM	O75409	117 aa		1.79	□□□□□ -2.12
SNHG1-222	ENST00000545308	DEFB1	P60022	68 aa		1.79	□□□□□ -2.12
SNHG1-222	ENST00000545308	PKIA	P61925	76 aa		1.79	□□□□□ -2.12
SNHG1-222	ENST00000545308	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		1.79	□□□□□ -2.12
SNHG1-222	ENST00000545308	TMEM91	Q6ZNR0	172 aa		1.79	□□□□□ -2.12
SNHG1-222	ENST00000545308	C9orf163	Q8N9P6	203 aa		1.79	□□□□□ -2.12
SNHG1-222	ENST00000545308	ZNF431	Q8TF32	576 aa	Predicted RBP	1.79	□□□□□ -2.12
SNHG1-222	ENST00000545308	COPZ2	Q9P299	210 aa		1.79	□□□□□ -2.12
SNHG1-222	ENST00000545308	HIGD1A	Q9Y241	93 aa		1.79	□□□□□ -2.12
SNHG1-222	ENST00000545308	TNXB	P22105	4242 aa		1.79	□□□□□ -2.12
SNHG1-222	ENST00000545308	DNAH8	Q96JB1	4490 aa		1.79	□□□□□ -2.12
SNHG1-222	ENST00000545308		A0A087WX48	190 aa		1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	TRBV6-4	A0A1B0GX49	114 aa		1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	TRDV1	A0A1B0GX56	115 aa		1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	IGHV3-30	P01768	117 aa		1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	IGHV3-33	P01772	117 aa		1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	CRP	P02741	224 aa		1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	IL5	P05113	134 aa		1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	OR4E1	P0C645	316 aa		1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	IGHV3-30-5	P0DP03	117 aa		1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	GNGT1	P63211	74 aa		1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	INSL4	Q14641	139 aa		1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	RHOH	Q15669	191 aa		1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	SPINK9	Q5DT21	86 aa		1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	NMS	Q5H8A3	153 aa		1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	SPANXN5	Q5MJ07	72 aa		1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	TMEM78	Q5T7P6	136 aa		1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	C7orf65	Q6ZTY9	151 aa		1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308		Q8TAT8	98 aa		1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	MBD3L1	Q8WWY6	194 aa		1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	CIB3	Q96Q77	187 aa	Predicted RBP	1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	NHP2	Q9NX24	153 aa	Known RBP	1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	MRPL36	Q9P0J6	103 aa	Known RBP	1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	LINC00474	Q9P2X8	69 aa		1.78	□□□□□ -2.12
SNHG1-222	ENST00000545308	TRAV1-1	A0A0B4J248	108 aa		1.77	□□□□□ -2.13
SNHG1-222	ENST00000545308	DUXB	A0A1W2PPF3	345 aa		1.77	□□□□□ -2.13
SNHG1-222	ENST00000545308	MGST1	P10620	155 aa	Known RBP	1.77	□□□□□ -2.13
SNHG1-222	ENST00000545308	RNASE4	P34096	147 aa	Known RBP	1.77	□□□□□ -2.13
SNHG1-222	ENST00000545308	KRTAP21-2	Q3LI59	83 aa		1.77	□□□□□ -2.13
SNHG1-222	ENST00000545308	LINC01554	Q52M75	96 aa		1.77	□□□□□ -2.13
SNHG1-222	ENST00000545308	KRTAP13-1	Q8IUC0	172 aa		1.77	□□□□□ -2.13
SNHG1-222	ENST00000545308	PYDC1	Q8WXC3	89 aa		1.77	□□□□□ -2.13
SNHG1-222	ENST00000545308	NPVF	Q9HCQ7	196 aa		1.77	□□□□□ -2.13
SNHG1-222	ENST00000545308	EPDR1	Q9UM22	224 aa		1.77	□□□□□ -2.13
SNHG1-222	ENST00000545308		M0R2P5	195 aa		1.76	□□□□□ -2.13
SNHG1-222	ENST00000545308	TAX1BP3	O14907	124 aa		1.76	□□□□□ -2.13
SNHG1-222	ENST00000545308	CRYGA	P11844	174 aa		1.76	□□□□□ -2.13
SNHG1-222	ENST00000545308	UBE2B	P63146	152 aa		1.76	□□□□□ -2.13
SNHG1-222	ENST00000545308	SMCO1	Q147U7	214 aa		1.76	□□□□□ -2.13
SNHG1-222	ENST00000545308	MIXL1	Q9H2W2	232 aa		1.76	□□□□□ -2.13
SNHG1-222	ENST00000545308	PAIP2B	Q9ULR5	123 aa	Known RBP	1.76	□□□□□ -2.13
SNHG1-222	ENST00000545308	LSM2	Q9Y333	95 aa	Known RBP	1.76	□□□□□ -2.13
SNHG1-222	ENST00000545308	LENEP	Q9Y5L5	61 aa		1.76	□□□□□ -2.13

Retrieved 100 of 20,778 RNA–protein pairs in 215.5 ms