RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 RNF185Q96GF1 192 aa4.99□□□□□ -1.61
SRGAP1-206ENST00000543397 CHCHD7Q9BUK0 85 aa4.99□□□□□ -1.61
SRGAP1-206ENST00000543397 LINC00474Q9P2X8 69 aa4.99□□□□□ -1.61
SRGAP1-206ENST00000543397 TSHBP01222 138 aa4.99□□□□□ -1.61
SRGAP1-206ENST00000543397 ACYP1P07311 99 aa4.99□□□□□ -1.61
SRGAP1-206ENST00000543397 ATG2AQ2TAZ0 1938 aa4.99□□□□□ -1.61
SRGAP1-206ENST00000543397 PDE6GP18545 87 aa4.98□□□□□ -1.61
SRGAP1-206ENST00000543397 TEN1Q86WV5 123 aa4.98□□□□□ -1.61
SRGAP1-206ENST00000543397 C1orf158Q8N1D5 194 aa4.98□□□□□ -1.61
SRGAP1-206ENST00000543397 UPK3BQ9BT76 320 aa4.98□□□□□ -1.61
SRGAP1-206ENST00000543397 MGAM2Q2M2H8 2515 aa4.98□□□□□ -1.61
SRGAP1-206ENST00000543397 CPAMD8Q8IZJ3 1885 aa4.98□□□□□ -1.61
SRGAP1-206ENST00000543397 TMEM223A0PJW6 202 aa4.98□□□□□ -1.61
SRGAP1-206ENST00000543397 IGKV2-28A0A075B6P5 120 aa4.97□□□□□ -1.61
SRGAP1-206ENST00000543397 IGKV2D-28P01615 120 aa4.97□□□□□ -1.61
SRGAP1-206ENST00000543397 TET2Q6N021 2002 aaPredicted RBP4.97□□□□□ -1.61
SRGAP1-206ENST00000543397 POLR2KP53803 58 aaKnown RBP4.97□□□□□ -1.61
SRGAP1-206ENST00000543397 UBE2D4Q9Y2X8 147 aa4.97□□□□□ -1.61
SRGAP1-206ENST00000543397 KRTAP24-1Q3LI83 254 aa4.97□□□□□ -1.61
SRGAP1-206ENST00000543397 Q8N2B8 174 aa4.97□□□□□ -1.61
SRGAP1-206ENST00000543397 USP24Q9UPU5 2620 aa4.97□□□□□ -1.61
SRGAP1-206ENST00000543397 IGKV2D-26A0A0A0MRZ7 120 aa4.97□□□□□ -1.61
SRGAP1-206ENST00000543397 MRPS12O15235 138 aaKnown RBP4.97□□□□□ -1.61
SRGAP1-206ENST00000543397 C8orf87E5RJ46 101 aa4.96□□□□□ -1.61
SRGAP1-206ENST00000543397 PRR4Q16378 134 aa4.96□□□□□ -1.62
SRGAP1-206ENST00000543397 C20orf197Q8N268 126 aa4.96□□□□□ -1.62
SRGAP1-206ENST00000543397 LINC00308Q8TCZ7 52 aa4.96□□□□□ -1.62
SRGAP1-206ENST00000543397 C1orf134Q5TEV5 83 aa4.96□□□□□ -1.62
SRGAP1-206ENST00000543397 MAST4O15021 2626 aa4.95□□□□□ -1.62
SRGAP1-206ENST00000543397 TRBV10-2A0A0K0K1G8 114 aa4.95□□□□□ -1.62
SRGAP1-206ENST00000543397 CDC42SE2Q9NRR3 84 aa4.95□□□□□ -1.62
SRGAP1-206ENST00000543397 TRAV23DV6A0A075B6W5 121 aa4.95□□□□□ -1.62
SRGAP1-206ENST00000543397 IGLV5-52A0A0A0MRZ9 124 aa4.95□□□□□ -1.62
SRGAP1-206ENST00000543397 M0R378 163 aa4.95□□□□□ -1.62
SRGAP1-206ENST00000543397 LST1O00453 97 aa4.95□□□□□ -1.62
SRGAP1-206ENST00000543397 CNFNQ9BYD5 112 aa4.95□□□□□ -1.62
SRGAP1-206ENST00000543397 SERP2Q8N6R1 65 aa4.94□□□□□ -1.62
SRGAP1-206ENST00000543397 MAPKAPK5-AS1Q8N8E1 139 aa4.94□□□□□ -1.62
SRGAP1-206ENST00000543397 PRRC2CQ9Y520 2896 aaKnown RBP4.94□□□□□ -1.62
SRGAP1-206ENST00000543397 FHL2Q14192 279 aa4.94□□□□□ -1.62
SRGAP1-206ENST00000543397 CYSRT1A8MQ03 144 aa4.94□□□□□ -1.62
SRGAP1-206ENST00000543397 TMEM254Q8TBM7 123 aa4.94□□□□□ -1.62
SRGAP1-206ENST00000543397 COL4A2P08572 1712 aa4.94□□□□□ -1.62
SRGAP1-206ENST00000543397 IGKV3D-7A0A0C4DH55 119 aa4.94□□□□□ -1.62
SRGAP1-206ENST00000543397 Q8IZM0 81 aa4.94□□□□□ -1.62
SRGAP1-206ENST00000543397 Q6ZRU5 148 aa4.93□□□□□ -1.62
SRGAP1-206ENST00000543397 MUC7Q8TAX7 377 aa4.93□□□□□ -1.62
SRGAP1-206ENST00000543397 RPL37AP8A6NKH3 93 aa4.93□□□□□ -1.62
SRGAP1-206ENST00000543397 AGRNO00468 2067 aa4.93□□□□□ -1.62
SRGAP1-206ENST00000543397 BPY2O14599 106 aa4.93□□□□□ -1.62
SRGAP1-206ENST00000543397 TCL1BO95988 128 aa4.93□□□□□ -1.62
SRGAP1-206ENST00000543397 WFDC9Q8NEX5 89 aa4.93□□□□□ -1.62
SRGAP1-206ENST00000543397 DHRS4-AS1Q9P1J3 65 aa4.93□□□□□ -1.62
SRGAP1-206ENST00000543397 NDUFC1O43677 76 aa4.92□□□□□ -1.62
SRGAP1-206ENST00000543397 FSHBP01225 129 aa4.92□□□□□ -1.62
SRGAP1-206ENST00000543397 C14orf132Q9NPU4 83 aa4.92□□□□□ -1.62
SRGAP1-206ENST00000543397 PTPRBP23467 1997 aa4.92□□□□□ -1.62
SRGAP1-206ENST00000543397 COX17Q14061 63 aa4.92□□□□□ -1.62
SRGAP1-206ENST00000543397 ATRQ13535 2644 aa4.92□□□□□ -1.62
SRGAP1-206ENST00000543397 A8MUN3 132 aa4.92□□□□□ -1.62
SRGAP1-206ENST00000543397 EGFEM1PQ0D2K5 195 aa4.92□□□□□ -1.62
SRGAP1-206ENST00000543397 HELZ2Q9BYK8 2649 aaKnown RBP4.92□□□□□ -1.62
SRGAP1-206ENST00000543397 GAS8-AS1O95177 125 aa4.92□□□□□ -1.62
SRGAP1-206ENST00000543397 C7orf65Q6ZTY9 151 aa4.92□□□□□ -1.62
SRGAP1-206ENST00000543397 SPINK6Q6UWN8 80 aa4.91□□□□□ -1.62
SRGAP1-206ENST00000543397 TRBV30A0A0K0K1B3 111 aa4.91□□□□□ -1.62
SRGAP1-206ENST00000543397 RPL28P46779 137 aaKnown RBP4.91□□□□□ -1.62
SRGAP1-206ENST00000543397 UNQ6190/PRO20217Q6UXQ8 127 aa4.91□□□□□ -1.62
SRGAP1-206ENST00000543397 IGKV4-1P06312 121 aa4.91□□□□□ -1.62
SRGAP1-206ENST00000543397 WFDC10BQ8IUB3 73 aa4.91□□□□□ -1.62
SRGAP1-206ENST00000543397 C6orf223Q8N319 242 aa4.91□□□□□ -1.62
SRGAP1-206ENST00000543397 LINC00242Q5T6M2 205 aa4.9□□□□□ -1.62
SRGAP1-206ENST00000543397 LYPD5Q6UWN5 251 aa4.9□□□□□ -1.62
SRGAP1-206ENST00000543397 Q6ZQY7 126 aa4.9□□□□□ -1.62
SRGAP1-206ENST00000543397 PRAC1Q96KF2 57 aa4.9□□□□□ -1.62
SRGAP1-206ENST00000543397 IGLV4-60A0A075B6I1 120 aa4.9□□□□□ -1.63
SRGAP1-206ENST00000543397 LINC00643Q86TS7 51 aa4.9□□□□□ -1.63
SRGAP1-206ENST00000543397 SLPIP03973 132 aa4.9□□□□□ -1.63
SRGAP1-206ENST00000543397 UTRNP46939 3433 aa4.9□□□□□ -1.63
SRGAP1-206ENST00000543397 CCKP06307 115 aa4.89□□□□□ -1.63
SRGAP1-206ENST00000543397 IGIPA6NJ69 53 aa4.88□□□□□ -1.63
SRGAP1-206ENST00000543397 KRTAP16-1A8MUX0 517 aa4.88□□□□□ -1.63
SRGAP1-206ENST00000543397 CRYGAP11844 174 aa4.88□□□□□ -1.63
SRGAP1-206ENST00000543397 ZFHX4Q86UP3 3567 aa4.88□□□□□ -1.63
SRGAP1-206ENST00000543397 PSPHP1O15172 72 aa4.88□□□□□ -1.63
SRGAP1-206ENST00000543397 COX6A2Q02221 97 aa4.88□□□□□ -1.63
SRGAP1-206ENST00000543397 A0A1B0GUV1 79 aa4.88□□□□□ -1.63
SRGAP1-206ENST00000543397 MUC4Q99102 2169 aa4.87□□□□□ -1.63
SRGAP1-206ENST00000543397 SMIM1B2RUZ4 78 aa4.87□□□□□ -1.63
SRGAP1-206ENST00000543397 PRR15Q8IV56 129 aa4.87□□□□□ -1.63
SRGAP1-206ENST00000543397 SBSPONQ8IVN8 264 aa4.87□□□□□ -1.63
SRGAP1-206ENST00000543397 C9orf116Q5BN46 136 aaPredicted RBP4.87□□□□□ -1.63
SRGAP1-206ENST00000543397 TRBV7-6A0A0J9YX20 115 aa4.86□□□□□ -1.63
SRGAP1-206ENST00000543397 LINC01554Q52M75 96 aa4.86□□□□□ -1.63
SRGAP1-206ENST00000543397 POM121L12Q8N7R1 296 aa4.86□□□□□ -1.63
SRGAP1-206ENST00000543397 TP73-AS1Q9UF72 201 aa4.86□□□□□ -1.63
SRGAP1-206ENST00000543397 C3orf84H3BNL1 204 aa4.86□□□□□ -1.63
SRGAP1-206ENST00000543397 IGLV5-39A0A0G2JS06 123 aa4.86□□□□□ -1.63
SRGAP1-206ENST00000543397 LINC01556Q5JQF7 62 aa4.86□□□□□ -1.63
SRGAP1-206ENST00000543397 Q6ZSN1 163 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms