RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 LEPROTO15243 131 aa3.79□□□□□ -1.8
ABCF1-207ENST00000542772 TLX1NBP0CAT3 122 aa3.79□□□□□ -1.8
ABCF1-207ENST00000542772 CXCL5P42830 114 aa3.79□□□□□ -1.8
ABCF1-207ENST00000542772 SPAG11BQ08648 103 aa3.79□□□□□ -1.8
ABCF1-207ENST00000542772 SYCNQ0VAF6 134 aa3.79□□□□□ -1.8
ABCF1-207ENST00000542772 HIGD2BQ4VC39 106 aa3.79□□□□□ -1.8
ABCF1-207ENST00000542772 C10orf25Q5T742 122 aa3.79□□□□□ -1.8
ABCF1-207ENST00000542772 UNQ6190/PRO20217Q6UXQ8 127 aa3.79□□□□□ -1.8
ABCF1-207ENST00000542772 SDIM1Q6ZPB5 146 aa3.79□□□□□ -1.8
ABCF1-207ENST00000542772 Q6ZRU5 148 aa3.79□□□□□ -1.8
ABCF1-207ENST00000542772 STPG4Q8N801 248 aa3.79□□□□□ -1.8
ABCF1-207ENST00000542772 LINC00526Q96FQ7 95 aa3.79□□□□□ -1.8
ABCF1-207ENST00000542772 VAMP8Q9BV40 100 aa3.79□□□□□ -1.8
ABCF1-207ENST00000542772 PRO1933Q9H354 126 aa3.79□□□□□ -1.8
ABCF1-207ENST00000542772 DNAH8Q96JB1 4490 aa3.78□□□□□ -1.8
ABCF1-207ENST00000542772 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.78□□□□□ -1.8
ABCF1-207ENST00000542772 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.78□□□□□ -1.8
ABCF1-207ENST00000542772 NDUFA1O15239 70 aa3.78□□□□□ -1.8
ABCF1-207ENST00000542772 PRSS2P07478 247 aa3.78□□□□□ -1.8
ABCF1-207ENST00000542772 SFTA2Q6UW10 78 aa3.78□□□□□ -1.8
ABCF1-207ENST00000542772 C2orf82Q6UX34 121 aa3.78□□□□□ -1.8
ABCF1-207ENST00000542772 PLEKHB2Q96CS7 222 aa3.78□□□□□ -1.8
ABCF1-207ENST00000542772 ZNF625Q96I27 306 aaPredicted RBP3.78□□□□□ -1.8
ABCF1-207ENST00000542772 CAMK2N2Q96S95 79 aa3.78□□□□□ -1.8
ABCF1-207ENST00000542772 C6orf48Q9UBA6 75 aa3.78□□□□□ -1.8
ABCF1-207ENST00000542772 DYNC1H1Q14204 4646 aaKnown RBP3.78□□□□□ -1.8
ABCF1-207ENST00000542772 IGKV2D-26A0A0A0MRZ7 120 aa3.77□□□□□ -1.81
ABCF1-207ENST00000542772 IGLV5-52A0A0A0MRZ9 124 aa3.77□□□□□ -1.81
ABCF1-207ENST00000542772 J3QQQ9 107 aa3.77□□□□□ -1.81
ABCF1-207ENST00000542772 GCSHP23434 173 aa3.77□□□□□ -1.81
ABCF1-207ENST00000542772 NMUP48645 174 aa3.77□□□□□ -1.81
ABCF1-207ENST00000542772 CKS1BP61024 79 aa3.77□□□□□ -1.81
ABCF1-207ENST00000542772 HERVK_113P61574 105 aa3.77□□□□□ -1.81
ABCF1-207ENST00000542772 COX17Q14061 63 aa3.77□□□□□ -1.81
ABCF1-207ENST00000542772 C14orf144Q96I85 54 aa3.77□□□□□ -1.81
ABCF1-207ENST00000542772 TOMM7Q9P0U1 55 aa3.77□□□□□ -1.81
ABCF1-207ENST00000542772 LRP1BQ9NZR2 4599 aa3.76□□□□□ -1.81
ABCF1-207ENST00000542772 MYMXA0A1B0GTQ4 84 aa3.76□□□□□ -1.81
ABCF1-207ENST00000542772 EPM2AB3EWF7 344 aa3.76□□□□□ -1.81
ABCF1-207ENST00000542772 FUSP35637 526 aaKnown RBP eCLIP3.76□□□□□ -1.81
ABCF1-207ENST00000542772 TSPEAR-AS2P59090 65 aa3.76□□□□□ -1.81
ABCF1-207ENST00000542772 HERV-K104P63124 156 aa3.76□□□□□ -1.81
ABCF1-207ENST00000542772 CIRBPQ14011 172 aaKnown RBP3.76□□□□□ -1.81
ABCF1-207ENST00000542772 MAJINQ3KP22 176 aa3.76□□□□□ -1.81
ABCF1-207ENST00000542772 ANKRD39Q53RE8 183 aa3.76□□□□□ -1.81
ABCF1-207ENST00000542772 Q6ZSA8 131 aa3.76□□□□□ -1.81
ABCF1-207ENST00000542772 ATOH7Q8N100 152 aa3.76□□□□□ -1.81
ABCF1-207ENST00000542772 CARD19Q96LW7 228 aa3.76□□□□□ -1.81
ABCF1-207ENST00000542772 NDUFA12Q9UI09 145 aa3.76□□□□□ -1.81
ABCF1-207ENST00000542772 LOC107984156A0A0G2JMH3 177 aa3.75□□□□□ -1.81
ABCF1-207ENST00000542772 LOC107984640A0A0U1RRK4 108 aa3.75□□□□□ -1.81
ABCF1-207ENST00000542772 C16orf90A8MZG2 172 aa3.75□□□□□ -1.81
ABCF1-207ENST00000542772 NDUFC2-KCTD14E9PQ53 114 aa3.75□□□□□ -1.81
ABCF1-207ENST00000542772 M0R143 59 aa3.75□□□□□ -1.81
ABCF1-207ENST00000542772 KRTAP10-1P60331 282 aa3.75□□□□□ -1.81
ABCF1-207ENST00000542772 C9orf116Q5BN46 136 aaPredicted RBP3.75□□□□□ -1.81
ABCF1-207ENST00000542772 Q6ZRP5 223 aa3.75□□□□□ -1.81
ABCF1-207ENST00000542772 ARL17AQ8IVW1 177 aa3.75□□□□□ -1.81
ABCF1-207ENST00000542772 MIEN1Q9BRT3 115 aa3.75□□□□□ -1.81
ABCF1-207ENST00000542772 PKIGQ9Y2B9 76 aa3.75□□□□□ -1.81
ABCF1-207ENST00000542772 PAM16Q9Y3D7 125 aa3.75□□□□□ -1.81
ABCF1-207ENST00000542772 EPPK1P58107 5090 aaKnown RBP3.75□□□□□ -1.81
ABCF1-207ENST00000542772 PKHD1P08F94 4074 aa3.75□□□□□ -1.81
ABCF1-207ENST00000542772 A0A0J9YXY3 114 aa3.74□□□□□ -1.81
ABCF1-207ENST00000542772 HSBP1L1C9JCN9 74 aa3.74□□□□□ -1.81
ABCF1-207ENST00000542772 DLEU1O43261 78 aa3.74□□□□□ -1.81
ABCF1-207ENST00000542772 LGALS3P17931 250 aaKnown RBP3.74□□□□□ -1.81
ABCF1-207ENST00000542772 LINC01620Q4KN68 170 aa3.74□□□□□ -1.81
ABCF1-207ENST00000542772 SPATA45Q537H7 98 aa3.74□□□□□ -1.81
ABCF1-207ENST00000542772 FAM30AQ9NZY2 134 aa3.74□□□□□ -1.81
ABCF1-207ENST00000542772 LINC00474Q9P2X8 69 aa3.74□□□□□ -1.81
ABCF1-207ENST00000542772 UQCR10Q9UDW1 63 aa3.74□□□□□ -1.81
ABCF1-207ENST00000542772 ERG28Q9UKR5 140 aa3.74□□□□□ -1.81
ABCF1-207ENST00000542772 PLA2G2DQ9UNK4 145 aa3.74□□□□□ -1.81
ABCF1-207ENST00000542772 A0A096LNI7 61 aa3.73□□□□□ -1.81
ABCF1-207ENST00000542772 PANO1I0J062 215 aa3.73□□□□□ -1.81
ABCF1-207ENST00000542772 TIMM17BO60830 172 aa3.73□□□□□ -1.81
ABCF1-207ENST00000542772 COX8AP10176 69 aa3.73□□□□□ -1.81
ABCF1-207ENST00000542772 PTTG1IPP53801 180 aa3.73□□□□□ -1.81
ABCF1-207ENST00000542772 XGP55808 180 aa3.73□□□□□ -1.81
ABCF1-207ENST00000542772 PCP2Q8IVA1 136 aa3.73□□□□□ -1.81
ABCF1-207ENST00000542772 BOD1L2Q8IYS8 172 aa3.73□□□□□ -1.81
ABCF1-207ENST00000542772 ZNF815PA8K554 130 aa3.72□□□□□ -1.81
ABCF1-207ENST00000542772 SMIM13P0DJ93 91 aa3.72□□□□□ -1.81
ABCF1-207ENST00000542772 HNRNPA3P51991 378 aaKnown RBP3.72□□□□□ -1.81
ABCF1-207ENST00000542772 C9orf129Q5T035 196 aaKnown RBP3.72□□□□□ -1.81
ABCF1-207ENST00000542772 ADAMTSL4-AS1Q5T5F5 129 aa3.72□□□□□ -1.81
ABCF1-207ENST00000542772 KRTAP7-1Q8IUC3 87 aa3.72□□□□□ -1.81
ABCF1-207ENST00000542772 SPACA4Q8TDM5 124 aa3.72□□□□□ -1.81
ABCF1-207ENST00000542772 LITAFQ99732 161 aa3.72□□□□□ -1.81
ABCF1-207ENST00000542772 TTTY13Q9BZ97 58 aa3.72□□□□□ -1.81
ABCF1-207ENST00000542772 PPDPFQ9H3Y8 114 aa3.72□□□□□ -1.81
ABCF1-207ENST00000542772 PLAC8Q9NZF1 115 aa3.72□□□□□ -1.81
ABCF1-207ENST00000542772 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.72□□□□□ -1.81
ABCF1-207ENST00000542772 APOBP04114 4563 aaKnown RBP3.72□□□□□ -1.81
ABCF1-207ENST00000542772 A0A087WYN8 130 aa3.71□□□□□ -1.82
ABCF1-207ENST00000542772 A0A1B0GV90 55 aa3.71□□□□□ -1.82
ABCF1-207ENST00000542772 A0A1W2PNN7 141 aa3.71□□□□□ -1.82
ABCF1-207ENST00000542772 CDK2AP2O75956 126 aa3.71□□□□□ -1.82
ABCF1-207ENST00000542772 PFN2P35080 140 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms