RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 K7EQD1 137 aa2.95□□□□□ -1.94
SNHG1-219ENST00000542112 IGKV3-15P01624 115 aa2.95□□□□□ -1.94
SNHG1-219ENST00000542112 COX7BP24311 80 aa2.95□□□□□ -1.94
SNHG1-219ENST00000542112 C18orf65Q6ZTR6 163 aa2.95□□□□□ -1.94
SNHG1-219ENST00000542112 ZNRF1Q8ND25 227 aa2.95□□□□□ -1.94
SNHG1-219ENST00000542112 LEAP2Q969E1 77 aa2.95□□□□□ -1.94
SNHG1-219ENST00000542112 GAFA1Q96PS6 74 aa2.95□□□□□ -1.94
SNHG1-219ENST00000542112 PRR15LQ9BU68 103 aa2.95□□□□□ -1.94
SNHG1-219ENST00000542112 CDKN2A-AS1Q9UH64 79 aa2.95□□□□□ -1.94
SNHG1-219ENST00000542112 ZNF580Q9UK33 172 aa2.95□□□□□ -1.94
SNHG1-219ENST00000542112 DIDO1Q9BTC0 2240 aaKnown RBP2.95□□□□□ -1.94
SNHG1-219ENST00000542112 PLCE1Q9P212 2302 aa2.94□□□□□ -1.94
SNHG1-219ENST00000542112 ICE1Q9Y2F5 2266 aa2.94□□□□□ -1.94
SNHG1-219ENST00000542112 MAP1BP46821 2468 aaKnown RBP2.94□□□□□ -1.94
SNHG1-219ENST00000542112 TRGV2A0A075B6R0 118 aa2.94□□□□□ -1.94
SNHG1-219ENST00000542112 IGHV3-73A0A0B4J1V6 119 aa2.94□□□□□ -1.94
SNHG1-219ENST00000542112 PRAC2D3DTV9 90 aa2.94□□□□□ -1.94
SNHG1-219ENST00000542112 IGKV4-1P06312 121 aa2.94□□□□□ -1.94
SNHG1-219ENST00000542112 CCL3P10147 92 aa2.94□□□□□ -1.94
SNHG1-219ENST00000542112 CNBPP62633 177 aaKnown RBP2.94□□□□□ -1.94
SNHG1-219ENST00000542112 BSPH1Q075Z2 132 aa2.94□□□□□ -1.94
SNHG1-219ENST00000542112 NPBQ8NG41 125 aa2.94□□□□□ -1.94
SNHG1-219ENST00000542112 FAM104AQ969W3 186 aa2.94□□□□□ -1.94
SNHG1-219ENST00000542112 A0A0C4DFX4 3053 aa2.94□□□□□ -1.94
SNHG1-219ENST00000542112 DSCAML1Q8TD84 2053 aa2.94□□□□□ -1.94
SNHG1-219ENST00000542112 ARFGEF3Q5TH69 2177 aa2.94□□□□□ -1.94
SNHG1-219ENST00000542112 ANKRD11Q6UB99 2663 aaPredicted RBP2.93□□□□□ -1.94
SNHG1-219ENST00000542112 IGHV3-21A0A0B4J1V1 117 aa2.93□□□□□ -1.94
SNHG1-219ENST00000542112 IGHV3-16A0A0C4DH30 117 aa2.93□□□□□ -1.94
SNHG1-219ENST00000542112 IGLV1-44P01699 117 aa2.93□□□□□ -1.94
SNHG1-219ENST00000542112 IGKV2-30P06310 120 aa2.93□□□□□ -1.94
SNHG1-219ENST00000542112 C11orf71Q6IPW1 123 aa2.93□□□□□ -1.94
SNHG1-219ENST00000542112 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.93□□□□□ -1.94
SNHG1-219ENST00000542112 LINC00575Q6W349 94 aa2.93□□□□□ -1.94
SNHG1-219ENST00000542112 KCNQ1DNQ9H478 68 aa2.93□□□□□ -1.94
SNHG1-219ENST00000542112 PLAC8Q9NZF1 115 aa2.93□□□□□ -1.94
SNHG1-219ENST00000542112 DMXL1Q9Y485 3027 aa2.93□□□□□ -1.94
SNHG1-219ENST00000542112 PIEZO1Q92508 2521 aa2.93□□□□□ -1.94
SNHG1-219ENST00000542112 TNCP24821 2201 aa2.92□□□□□ -1.94
SNHG1-219ENST00000542112 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.92□□□□□ -1.94
SNHG1-219ENST00000542112 IGHV4-30-2A0A087WSY4 118 aa2.92□□□□□ -1.94
SNHG1-219ENST00000542112 IGHV7-81A0A0B4J1V7 117 aa2.92□□□□□ -1.94
SNHG1-219ENST00000542112 CCL18P55774 89 aa2.92□□□□□ -1.94
SNHG1-219ENST00000542112 COX17Q14061 63 aa2.92□□□□□ -1.94
SNHG1-219ENST00000542112 LINC00242Q5T6M2 205 aa2.92□□□□□ -1.94
SNHG1-219ENST00000542112 Q6ZTI0 123 aa2.92□□□□□ -1.94
SNHG1-219ENST00000542112 DEFB124Q8NES8 71 aa2.92□□□□□ -1.94
SNHG1-219ENST00000542112 COX7B2Q8TF08 81 aa2.92□□□□□ -1.94
SNHG1-219ENST00000542112 CHCHD7Q9BUK0 85 aa2.92□□□□□ -1.94
SNHG1-219ENST00000542112 KAAG1Q9UBP8 84 aa2.92□□□□□ -1.94
SNHG1-219ENST00000542112 TLN1Q9Y490 2541 aaKnown RBP2.92□□□□□ -1.94
SNHG1-219ENST00000542112 HIVEP3Q5T1R4 2406 aa2.92□□□□□ -1.94
SNHG1-219ENST00000542112 IGF2RP11717 2491 aa2.91□□□□□ -1.94
SNHG1-219ENST00000542112 RP1L1Q8IWN7 2480 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-219ENST00000542112 PINLYPA6NC86 204 aa2.91□□□□□ -1.94
SNHG1-219ENST00000542112 NDUFA4O00483 81 aa2.91□□□□□ -1.94
SNHG1-219ENST00000542112 IGHV3-53P01767 116 aa2.91□□□□□ -1.94
SNHG1-219ENST00000542112 LINC00158P58513 81 aa2.91□□□□□ -1.94
SNHG1-219ENST00000542112 KRTAP4-9Q9BYQ8 210 aa2.91□□□□□ -1.94
SNHG1-219ENST00000542112 WFDC10AQ9H1F0 79 aa2.91□□□□□ -1.94
SNHG1-219ENST00000542112 ZNF702PQ9H963 129 aa2.91□□□□□ -1.94
SNHG1-219ENST00000542112 S4R3C0 116 aa2.91□□□□□ -1.94
SNHG1-219ENST00000542112 CACNA1AO00555 2505 aa2.91□□□□□ -1.94
SNHG1-219ENST00000542112 WDFY3Q8IZQ1 3526 aa2.91□□□□□ -1.94
SNHG1-219ENST00000542112 NBASA2RRP1 2371 aa2.9□□□□□ -1.94
SNHG1-219ENST00000542112 NCOR2Q9Y618 2525 aa2.9□□□□□ -1.94
SNHG1-219ENST00000542112 CLPSL1A2RUU4 121 aa2.9□□□□□ -1.95
SNHG1-219ENST00000542112 IGLV1-47P01700 117 aa2.9□□□□□ -1.95
SNHG1-219ENST00000542112 IGHV1-46P01743 117 aa2.9□□□□□ -1.95
SNHG1-219ENST00000542112 IGHV4-59P01825 116 aa2.9□□□□□ -1.95
SNHG1-219ENST00000542112 IGHV1-8P0DP01 117 aa2.9□□□□□ -1.95
SNHG1-219ENST00000542112 PLA2G2AP14555 144 aa2.9□□□□□ -1.95
SNHG1-219ENST00000542112 DSCR9P59020 149 aa2.9□□□□□ -1.95
SNHG1-219ENST00000542112 HIGD2BQ4VC39 106 aa2.9□□□□□ -1.95
SNHG1-219ENST00000542112 PRR9Q5T870 116 aa2.9□□□□□ -1.95
SNHG1-219ENST00000542112 KRTAP4-7Q9BYR0 210 aa2.9□□□□□ -1.95
SNHG1-219ENST00000542112 ZNF706Q9Y5V0 76 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-219ENST00000542112 CEP295Q9C0D2 2601 aa2.9□□□□□ -1.95
SNHG1-219ENST00000542112 TPRP12270 2363 aaKnown RBP2.9□□□□□ -1.95
SNHG1-219ENST00000542112 SPTBN1Q01082 2364 aaKnown RBP2.9□□□□□ -1.95
SNHG1-219ENST00000542112 COL6A6A6NMZ7 2263 aa2.9□□□□□ -1.95
SNHG1-219ENST00000542112 ROS1P08922 2347 aa2.9□□□□□ -1.95
SNHG1-219ENST00000542112 CFAP54Q96N23 3096 aa2.89□□□□□ -1.95
SNHG1-219ENST00000542112 ZFHX4Q86UP3 3567 aa2.89□□□□□ -1.95
SNHG1-219ENST00000542112 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-219ENST00000542112 IGHV3OR16-12A0A075B7B8 117 aa2.89□□□□□ -1.95
SNHG1-219ENST00000542112 IGHV3-72A0A0B4J1Y9 119 aa2.89□□□□□ -1.95
SNHG1-219ENST00000542112 LRCOL1A6NCL2 159 aa2.89□□□□□ -1.95
SNHG1-219ENST00000542112 IGHV1-2P23083 117 aa2.89□□□□□ -1.95
SNHG1-219ENST00000542112 ATRXP46100 2492 aa2.89□□□□□ -1.95
SNHG1-219ENST00000542112 LMO4P61968 165 aa2.89□□□□□ -1.95
SNHG1-219ENST00000542112 RNASE13Q5GAN3 156 aaKnown RBP2.89□□□□□ -1.95
SNHG1-219ENST00000542112 ATP1A1-AS1Q5TC04 95 aa2.89□□□□□ -1.95
SNHG1-219ENST00000542112 ZNF843Q8N446 348 aa2.89□□□□□ -1.95
SNHG1-219ENST00000542112 MGAQ8IWI9 3026 aa2.89□□□□□ -1.95
SNHG1-219ENST00000542112 PRRC2CQ9Y520 2896 aaKnown RBP2.88□□□□□ -1.95
SNHG1-219ENST00000542112 ABCA4P78363 2273 aa2.88□□□□□ -1.95
SNHG1-219ENST00000542112 IGLV4-60A0A075B6I1 120 aa2.88□□□□□ -1.95
SNHG1-219ENST00000542112 IGHV3-35A0A0C4DH35 117 aa2.88□□□□□ -1.95
SNHG1-219ENST00000542112 IGHV3-66A0A0C4DH42 116 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms