RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 PRSS2P07478 247 aa16.42■□□□□ 0.22
TTC3-225ENST00000540756 Q8IZM0 81 aa16.42■□□□□ 0.22
TTC3-225ENST00000540756 SMIM13P0DJ93 91 aa16.41■□□□□ 0.22
TTC3-225ENST00000540756 MEIG1Q5JSS6 88 aa16.41■□□□□ 0.22
TTC3-225ENST00000540756 NUPR2A6NF83 97 aa16.4■□□□□ 0.22
TTC3-225ENST00000540756 HERV-K104P63124 156 aa16.4■□□□□ 0.22
TTC3-225ENST00000540756 IGKV2D-24A0A075B6R9 120 aa16.39■□□□□ 0.21
TTC3-225ENST00000540756 TIMM17BO60830 172 aa16.39■□□□□ 0.21
TTC3-225ENST00000540756 C6orf223Q8N319 242 aa16.39■□□□□ 0.21
TTC3-225ENST00000540756 SPANXDQ9BXN6 97 aa16.39■□□□□ 0.21
TTC3-225ENST00000540756 SPANXCQ9NY87 97 aa16.39■□□□□ 0.21
TTC3-225ENST00000540756 NAA38Q9BRA0 125 aaKnown RBP16.38■□□□□ 0.21
TTC3-225ENST00000540756 DNAH10Q8IVF4 4471 aa16.38■□□□□ 0.21
TTC3-225ENST00000540756 C1orf43Q9BWL3 253 aa16.38■□□□□ 0.21
TTC3-225ENST00000540756 A4D1N5 150 aa16.36■□□□□ 0.21
TTC3-225ENST00000540756 IBA57-AS1B1ANH7 110 aa16.36■□□□□ 0.21
TTC3-225ENST00000540756 CIRBPQ14011 172 aaKnown RBP16.36■□□□□ 0.21
TTC3-225ENST00000540756 KLK5Q9Y337 293 aaPredicted RBP16.36■□□□□ 0.21
TTC3-225ENST00000540756 COX11Q9Y6N1 276 aa16.36■□□□□ 0.21
TTC3-225ENST00000540756 SPAG11BQ08648 103 aa16.35■□□□□ 0.21
TTC3-225ENST00000540756 UBE2DNLQ8IWF7 75 aa16.35■□□□□ 0.21
TTC3-225ENST00000540756 APOMO95445 188 aa16.35■□□□□ 0.21
TTC3-225ENST00000540756 CKS1BP61024 79 aa16.35■□□□□ 0.21
TTC3-225ENST00000540756 KRTAP1-5Q9BYS1 174 aa16.35■□□□□ 0.21
TTC3-225ENST00000540756 PFN2P35080 140 aa16.34■□□□□ 0.21
TTC3-225ENST00000540756 CFAP161Q6P656 301 aa16.34■□□□□ 0.21
TTC3-225ENST00000540756 A0A1B0GWB2 263 aa16.33■□□□□ 0.21
TTC3-225ENST00000540756 CFC1BP0CG36 223 aa16.33■□□□□ 0.21
TTC3-225ENST00000540756 CFC1P0CG37 223 aa16.33■□□□□ 0.21
TTC3-225ENST00000540756 SOSTDC1Q6X4U4 206 aa16.33■□□□□ 0.21
TTC3-225ENST00000540756 C10orf25Q5T742 122 aa16.33■□□□□ 0.2
TTC3-225ENST00000540756 HIGD2BQ4VC39 106 aa16.32■□□□□ 0.2
TTC3-225ENST00000540756 TMEM238LA0A1B0GVL6 79 aa16.31■□□□□ 0.2
TTC3-225ENST00000540756 A6NJY4 79 aa16.31■□□□□ 0.2
TTC3-225ENST00000540756 C9orf116Q5BN46 136 aaPredicted RBP16.31■□□□□ 0.2
TTC3-225ENST00000540756 LINC00308Q8TCZ7 52 aa16.31■□□□□ 0.2
TTC3-225ENST00000540756 LINC00158P58513 81 aa16.31■□□□□ 0.2
TTC3-225ENST00000540756 RPL24P83731 157 aaKnown RBP16.31■□□□□ 0.2
TTC3-225ENST00000540756 CASC10Q5T4H9 136 aa16.31■□□□□ 0.2
TTC3-225ENST00000540756 UNQ6190/PRO20217Q6UXQ8 127 aa16.31■□□□□ 0.2
TTC3-225ENST00000540756 MIR7-3HGQ8N6C7 128 aa16.31■□□□□ 0.2
TTC3-225ENST00000540756 C15orf56Q8N910 161 aa16.31■□□□□ 0.2
TTC3-225ENST00000540756 VPS13DQ5THJ4 4388 aa16.31■□□□□ 0.2
TTC3-225ENST00000540756 ERG28Q9UKR5 140 aa16.3■□□□□ 0.2
TTC3-225ENST00000540756 H3BUT2 72 aa16.28■□□□□ 0.2
TTC3-225ENST00000540756 C9orf118A6NHY6 69 aa16.28■□□□□ 0.2
TTC3-225ENST00000540756 CXCL5P42830 114 aa16.26■□□□□ 0.19
TTC3-225ENST00000540756 SFTA2Q6UW10 78 aa16.26■□□□□ 0.19
TTC3-225ENST00000540756 IFITM1P13164 125 aa16.26■□□□□ 0.19
TTC3-225ENST00000540756 NTN5Q8WTR8 489 aaPredicted RBP16.26■□□□□ 0.19
TTC3-225ENST00000540756 ZNF561-AS1K7EIQ3 104 aa16.22■□□□□ 0.19
TTC3-225ENST00000540756 PGPEP1Q9NXJ5 209 aa16.22■□□□□ 0.19
TTC3-225ENST00000540756 KMT2AQ03164 3969 aa16.2■□□□□ 0.18
TTC3-225ENST00000540756 C6orf48Q9UBA6 75 aa16.2■□□□□ 0.18
TTC3-225ENST00000540756 TSPAN13O95857 204 aa16.19■□□□□ 0.18
TTC3-225ENST00000540756 PRO1854Q9UHT4 67 aa16.19■□□□□ 0.18
TTC3-225ENST00000540756 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.19■□□□□ 0.18
TTC3-225ENST00000540756 A0A0B4J2C4 111 aa16.19■□□□□ 0.18
TTC3-225ENST00000540756 VAMP3Q15836 100 aa16.19■□□□□ 0.18
TTC3-225ENST00000540756 MUC7Q8TAX7 377 aa16.19■□□□□ 0.18
TTC3-225ENST00000540756 LECT2O14960 151 aa16.18■□□□□ 0.18
TTC3-225ENST00000540756 H7C2G1 150 aa16.18■□□□□ 0.18
TTC3-225ENST00000540756 CAMK2N2Q96S95 79 aa16.18■□□□□ 0.18
TTC3-225ENST00000540756 A0A1W2PPM0 123 aa16.17■□□□□ 0.18
TTC3-225ENST00000540756 GVQW2A0A096LPI5 108 aaPredicted RBP16.16■□□□□ 0.18
TTC3-225ENST00000540756 Q6ZRU5 148 aa16.16■□□□□ 0.18
TTC3-225ENST00000540756 RMI2Q96E14 147 aa16.16■□□□□ 0.18
TTC3-225ENST00000540756 USP17L23D6RBM5 183 aa16.16■□□□□ 0.18
TTC3-225ENST00000540756 COX17Q14061 63 aa16.14■□□□□ 0.17
TTC3-225ENST00000540756 SND1-IT1Q9HBX3 110 aa16.14■□□□□ 0.17
TTC3-225ENST00000540756 NBDYA0A0U1RRE5 68 aa16.12■□□□□ 0.17
TTC3-225ENST00000540756 WFDC2Q14508 124 aa16.12■□□□□ 0.17
TTC3-225ENST00000540756 COPS9Q8WXC6 57 aa16.12■□□□□ 0.17
TTC3-225ENST00000540756 SLPIP03973 132 aa16.11■□□□□ 0.17
TTC3-225ENST00000540756 C2orf48Q96LS8 159 aa16.11■□□□□ 0.17
TTC3-225ENST00000540756 IGKV2-28A0A075B6P5 120 aa16.11■□□□□ 0.17
TTC3-225ENST00000540756 IGKV2D-28P01615 120 aa16.11■□□□□ 0.17
TTC3-225ENST00000540756 M0R2N4 97 aa16.09■□□□□ 0.17
TTC3-225ENST00000540756 PPDPFQ9H3Y8 114 aa16.09■□□□□ 0.17
TTC3-225ENST00000540756 FABP2P12104 132 aa16.09■□□□□ 0.17
TTC3-225ENST00000540756 Q8NDZ9 215 aa16.09■□□□□ 0.17
TTC3-225ENST00000540756 RPL13AP40429 203 aaKnown RBP16.08■□□□□ 0.16
TTC3-225ENST00000540756 WWC2-AS2Q96NR7 200 aa16.08■□□□□ 0.16
TTC3-225ENST00000540756 TRBV30A0A0K0K1B3 111 aa16.07■□□□□ 0.16
TTC3-225ENST00000540756 PRR3P79522 188 aaKnown RBP16.07■□□□□ 0.16
TTC3-225ENST00000540756 SYCNQ0VAF6 134 aa16.06■□□□□ 0.16
TTC3-225ENST00000540756 Q1RN00 199 aa16.06■□□□□ 0.16
TTC3-225ENST00000540756 LINC00337Q8N6G1 96 aa16.06■□□□□ 0.16
TTC3-225ENST00000540756 SPCS1Q9Y6A9 102 aa16.06■□□□□ 0.16
TTC3-225ENST00000540756 LOC107984156A0A0G2JMH3 177 aa16.06■□□□□ 0.16
TTC3-225ENST00000540756 UBE2V1Q13404 147 aa16.06■□□□□ 0.16
TTC3-225ENST00000540756 ARL17AQ8IVW1 177 aa16.06■□□□□ 0.16
TTC3-225ENST00000540756 XAGE1AQ9HD64 81 aa16.05■□□□□ 0.16
TTC3-225ENST00000540756 PSCAO43653 123 aa16.04■□□□□ 0.16
TTC3-225ENST00000540756 DNAH2Q9P225 4427 aa16.04■□□□□ 0.16
TTC3-225ENST00000540756 GAGE10A6NGK3 116 aa16.04■□□□□ 0.16
TTC3-225ENST00000540756 TTC32Q5I0X7 151 aa16.04■□□□□ 0.16
TTC3-225ENST00000540756 K7EP34 96 aa16.02■□□□□ 0.16
TTC3-225ENST00000540756 PSMB2P49721 201 aa16.01■□□□□ 0.15
TTC3-225ENST00000540756 CARD19Q96LW7 228 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms