RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 TSPEAR-AS2P59090 65 aa7.07□□□□□ -1.28
LEMD3-202ENST00000539442 CFAP161Q6P656 301 aa7.07□□□□□ -1.28
LEMD3-202ENST00000539442 SLC25A34Q6PIV7 304 aa7.07□□□□□ -1.28
LEMD3-202ENST00000539442 SFTA2Q6UW10 78 aa7.07□□□□□ -1.28
LEMD3-202ENST00000539442 COX7B2Q8TF08 81 aa7.07□□□□□ -1.28
LEMD3-202ENST00000539442 ORAOV1Q8WV07 137 aa7.07□□□□□ -1.28
LEMD3-202ENST00000539442 LYSTQ99698 3801 aa7.06□□□□□ -1.28
LEMD3-202ENST00000539442 MYMXA0A1B0GTQ4 84 aa7.06□□□□□ -1.28
LEMD3-202ENST00000539442 M0R2N4 97 aa7.06□□□□□ -1.28
LEMD3-202ENST00000539442 EREGO14944 169 aa7.06□□□□□ -1.28
LEMD3-202ENST00000539442 PSCAO43653 123 aa7.06□□□□□ -1.28
LEMD3-202ENST00000539442 CXCL5P42830 114 aa7.06□□□□□ -1.28
LEMD3-202ENST00000539442 PCP2Q8IVA1 136 aa7.06□□□□□ -1.28
LEMD3-202ENST00000539442 BOD1L2Q8IYS8 172 aa7.06□□□□□ -1.28
LEMD3-202ENST00000539442 C6orf223Q8N319 242 aa7.06□□□□□ -1.28
LEMD3-202ENST00000539442 C14orf144Q96I85 54 aa7.06□□□□□ -1.28
LEMD3-202ENST00000539442 TOMM7Q9P0U1 55 aa7.06□□□□□ -1.28
LEMD3-202ENST00000539442 UQCR10Q9UDW1 63 aa7.06□□□□□ -1.28
LEMD3-202ENST00000539442 NDUFA12Q9UI09 145 aa7.06□□□□□ -1.28
LEMD3-202ENST00000539442 GVQW2A0A096LPI5 108 aaPredicted RBP7.05□□□□□ -1.28
LEMD3-202ENST00000539442 ZNF815PA8K554 130 aa7.05□□□□□ -1.28
LEMD3-202ENST00000539442 NDUFA1O15239 70 aa7.05□□□□□ -1.28
LEMD3-202ENST00000539442 SPAG11BQ08648 103 aa7.05□□□□□ -1.28
LEMD3-202ENST00000539442 C6orf226Q5I0X4 101 aa7.05□□□□□ -1.28
LEMD3-202ENST00000539442 Q6ZRN7 208 aaPredicted RBP7.05□□□□□ -1.28
LEMD3-202ENST00000539442 C15orf56Q8N910 161 aa7.05□□□□□ -1.28
LEMD3-202ENST00000539442 LCE6AA0A183 80 aa7.04□□□□□ -1.28
LEMD3-202ENST00000539442 F8WDY8 70 aa7.04□□□□□ -1.28
LEMD3-202ENST00000539442 HERV-K104P63124 156 aa7.04□□□□□ -1.28
LEMD3-202ENST00000539442 KIAA0087Q14695 138 aa7.04□□□□□ -1.28
LEMD3-202ENST00000539442 MAPKAPK5-AS1Q8N8E1 139 aa7.04□□□□□ -1.28
LEMD3-202ENST00000539442 TTTY13Q9BZ97 58 aa7.04□□□□□ -1.28
LEMD3-202ENST00000539442 PRO1933Q9H354 126 aa7.04□□□□□ -1.28
LEMD3-202ENST00000539442 DNAH6Q9C0G6 4158 aa7.04□□□□□ -1.28
LEMD3-202ENST00000539442 USP17L23D6RBM5 183 aa7.03□□□□□ -1.28
LEMD3-202ENST00000539442 ZNF561-AS1K7EIQ3 104 aa7.03□□□□□ -1.28
LEMD3-202ENST00000539442 CKS1BP61024 79 aa7.03□□□□□ -1.28
LEMD3-202ENST00000539442 ZNF625Q96I27 306 aaPredicted RBP7.03□□□□□ -1.28
LEMD3-202ENST00000539442 C2orf48Q96LS8 159 aa7.03□□□□□ -1.28
LEMD3-202ENST00000539442 MIEN1Q9BRT3 115 aa7.03□□□□□ -1.28
LEMD3-202ENST00000539442 EIF4EBP3O60516 100 aaPredicted RBP7.02□□□□□ -1.29
LEMD3-202ENST00000539442 C14orf177Q52M58 125 aa7.02□□□□□ -1.29
LEMD3-202ENST00000539442 C1orf134Q5TEV5 83 aa7.02□□□□□ -1.29
LEMD3-202ENST00000539442 NTN5Q8WTR8 489 aaPredicted RBP7.02□□□□□ -1.29
LEMD3-202ENST00000539442 LINC00587B1AMM8 73 aa7.01□□□□□ -1.29
LEMD3-202ENST00000539442 HIGD2BQ4VC39 106 aa7.01□□□□□ -1.29
LEMD3-202ENST00000539442 SCGB1D4Q6XE38 83 aa7.01□□□□□ -1.29
LEMD3-202ENST00000539442 A0A0J9YXY3 114 aa7□□□□□ -1.29
LEMD3-202ENST00000539442 TIMM17BO60830 172 aa7□□□□□ -1.29
LEMD3-202ENST00000539442 HNRNPA3P51991 378 aaKnown RBP7□□□□□ -1.29
LEMD3-202ENST00000539442 CAMK2N2Q96S95 79 aa7□□□□□ -1.29
LEMD3-202ENST00000539442 HIGD1BQ9P298 99 aa7□□□□□ -1.29
LEMD3-202ENST00000539442 TP73-AS1Q9UF72 201 aa7□□□□□ -1.29
LEMD3-202ENST00000539442 TRBV30A0A0K0K1B3 111 aa6.99□□□□□ -1.29
LEMD3-202ENST00000539442 LRCOL1A6NCL2 159 aa6.99□□□□□ -1.29
LEMD3-202ENST00000539442 CIRBPQ14011 172 aaKnown RBP6.99□□□□□ -1.29
LEMD3-202ENST00000539442 C2orf82Q6UX34 121 aa6.99□□□□□ -1.29
LEMD3-202ENST00000539442 C2orf91Q6ZV80 131 aa6.99□□□□□ -1.29
LEMD3-202ENST00000539442 TMEM238C9JI98 176 aa6.98□□□□□ -1.29
LEMD3-202ENST00000539442 LECT2O14960 151 aa6.98□□□□□ -1.29
LEMD3-202ENST00000539442 DDTP30046 118 aa6.98□□□□□ -1.29
LEMD3-202ENST00000539442 SYCNQ0VAF6 134 aa6.98□□□□□ -1.29
LEMD3-202ENST00000539442 WFDC2Q14508 124 aa6.98□□□□□ -1.29
LEMD3-202ENST00000539442 MEIG1Q5JSS6 88 aa6.98□□□□□ -1.29
LEMD3-202ENST00000539442 UNQ6190/PRO20217Q6UXQ8 127 aa6.98□□□□□ -1.29
LEMD3-202ENST00000539442 LINC00526Q96FQ7 95 aa6.98□□□□□ -1.29
LEMD3-202ENST00000539442 SPANXB1Q9NS25 103 aaPredicted RBP6.98□□□□□ -1.29
LEMD3-202ENST00000539442 COX17Q14061 63 aa6.97□□□□□ -1.29
LEMD3-202ENST00000539442 RNF151Q2KHN1 245 aa6.97□□□□□ -1.29
LEMD3-202ENST00000539442 CARD19Q96LW7 228 aa6.97□□□□□ -1.29
LEMD3-202ENST00000539442 ERG28Q9UKR5 140 aa6.97□□□□□ -1.29
LEMD3-202ENST00000539442 KMT2AQ03164 3969 aa6.96□□□□□ -1.3
LEMD3-202ENST00000539442 A0A087WTM6 91 aa6.96□□□□□ -1.3
LEMD3-202ENST00000539442 CNBPP62633 177 aaKnown RBP6.96□□□□□ -1.3
LEMD3-202ENST00000539442 TAL2Q16559 108 aa6.96□□□□□ -1.3
LEMD3-202ENST00000539442 C10orf25Q5T742 122 aa6.96□□□□□ -1.3
LEMD3-202ENST00000539442 Q6ZRU5 148 aa6.96□□□□□ -1.3
LEMD3-202ENST00000539442 Q6ZVH6 145 aa6.96□□□□□ -1.3
LEMD3-202ENST00000539442 LITAFQ99732 161 aa6.96□□□□□ -1.3
LEMD3-202ENST00000539442 C6orf48Q9UBA6 75 aa6.96□□□□□ -1.3
LEMD3-202ENST00000539442 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.95□□□□□ -1.3
LEMD3-202ENST00000539442 GCSHP23434 173 aa6.95□□□□□ -1.3
LEMD3-202ENST00000539442 Q8N814 137 aa6.95□□□□□ -1.3
LEMD3-202ENST00000539442 SPANXDQ9BXN6 97 aa6.95□□□□□ -1.3
LEMD3-202ENST00000539442 SPANXCQ9NY87 97 aa6.95□□□□□ -1.3
LEMD3-202ENST00000539442 SACSQ9NZJ4 4579 aa6.94□□□□□ -1.3
LEMD3-202ENST00000539442 RTL8CO15255 209 aa6.94□□□□□ -1.3
LEMD3-202ENST00000539442 SMIM13P0DJ93 91 aa6.94□□□□□ -1.3
LEMD3-202ENST00000539442 LINC00158P58513 81 aa6.94□□□□□ -1.3
LEMD3-202ENST00000539442 HSD52Q0P140 79 aa6.94□□□□□ -1.3
LEMD3-202ENST00000539442 SRSF9Q13242 221 aaKnown RBP eCLIP6.94□□□□□ -1.3
LEMD3-202ENST00000539442 KRTAP9-3Q9BYQ3 159 aa6.94□□□□□ -1.3
LEMD3-202ENST00000539442 HYDINQ4G0P3 5121 aa6.94□□□□□ -1.3
LEMD3-202ENST00000539442 DNAH10Q8IVF4 4471 aa6.93□□□□□ -1.3
LEMD3-202ENST00000539442 PCP4L1A6NKN8 68 aa6.93□□□□□ -1.3
LEMD3-202ENST00000539442 SLPIP03973 132 aa6.93□□□□□ -1.3
LEMD3-202ENST00000539442 IFITM1P13164 125 aa6.93□□□□□ -1.3
LEMD3-202ENST00000539442 PFN2P35080 140 aa6.93□□□□□ -1.3
LEMD3-202ENST00000539442 PTTG1IPP53801 180 aa6.93□□□□□ -1.3
LEMD3-202ENST00000539442 KRTAP19-4Q3LI73 84 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms