RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 USP17L23D6RBM5 183 aa13.56□□□□□ -0.24
COPS7A-208ENST00000538410 HIGD2BQ4VC39 106 aa13.56□□□□□ -0.24
COPS7A-208ENST00000538410 C2orf91Q6ZV80 131 aa13.56□□□□□ -0.24
COPS7A-208ENST00000538410 ZNF561-AS1K7EIQ3 104 aa13.55□□□□□ -0.24
COPS7A-208ENST00000538410 CXCL5P42830 114 aa13.55□□□□□ -0.24
COPS7A-208ENST00000538410 CKS1BP61024 79 aa13.55□□□□□ -0.24
COPS7A-208ENST00000538410 SFTA2Q6UW10 78 aa13.55□□□□□ -0.24
COPS7A-208ENST00000538410 SCGB1D4Q6XE38 83 aa13.55□□□□□ -0.24
COPS7A-208ENST00000538410 C6orf223Q8N319 242 aa13.55□□□□□ -0.24
COPS7A-208ENST00000538410 LINC00526Q96FQ7 95 aa13.55□□□□□ -0.24
COPS7A-208ENST00000538410 A0A0J9YXY3 114 aa13.54□□□□□ -0.24
COPS7A-208ENST00000538410 HNRNPA3P51991 378 aaKnown RBP13.54□□□□□ -0.24
COPS7A-208ENST00000538410 HERV-K104P63124 156 aa13.54□□□□□ -0.24
COPS7A-208ENST00000538410 C2orf82Q6UX34 121 aa13.54□□□□□ -0.24
COPS7A-208ENST00000538410 PCP4L1A6NKN8 68 aa13.53□□□□□ -0.24
COPS7A-208ENST00000538410 RTL8CO15255 209 aa13.53□□□□□ -0.24
COPS7A-208ENST00000538410 DDTP30046 118 aa13.53□□□□□ -0.24
COPS7A-208ENST00000538410 NTN5Q8WTR8 489 aaPredicted RBP13.53□□□□□ -0.24
COPS7A-208ENST00000538410 HIGD1BQ9P298 99 aa13.53□□□□□ -0.24
COPS7A-208ENST00000538410 LECT2O14960 151 aa13.51□□□□□ -0.25
COPS7A-208ENST00000538410 C2orf48Q96LS8 159 aa13.51□□□□□ -0.25
COPS7A-208ENST00000538410 WFDC2Q14508 124 aa13.5□□□□□ -0.25
COPS7A-208ENST00000538410 C1orf134Q5TEV5 83 aa13.5□□□□□ -0.25
COPS7A-208ENST00000538410 F8WDY8 70 aa13.49□□□□□ -0.25
COPS7A-208ENST00000538410 UNQ6190/PRO20217Q6UXQ8 127 aa13.49□□□□□ -0.25
COPS7A-208ENST00000538410 CAMK2N2Q96S95 79 aa13.49□□□□□ -0.25
COPS7A-208ENST00000538410 DNAH2Q9P225 4427 aa13.48□□□□□ -0.25
COPS7A-208ENST00000538410 LRCOL1A6NCL2 159 aa13.48□□□□□ -0.25
COPS7A-208ENST00000538410 C10orf25Q5T742 122 aa13.48□□□□□ -0.25
COPS7A-208ENST00000538410 A0A1B0GVY2 172 aa13.47□□□□□ -0.25
COPS7A-208ENST00000538410 MEIG1Q5JSS6 88 aa13.47□□□□□ -0.25
COPS7A-208ENST00000538410 TIMM17BO60830 172 aa13.46□□□□□ -0.25
COPS7A-208ENST00000538410 LITAFQ99732 161 aa13.46□□□□□ -0.25
COPS7A-208ENST00000538410 TMEM238C9JI98 176 aa13.46□□□□□ -0.26
COPS7A-208ENST00000538410 CTAG1AP78358 180 aa13.46□□□□□ -0.26
COPS7A-208ENST00000538410 CIRBPQ14011 172 aaKnown RBP13.46□□□□□ -0.26
COPS7A-208ENST00000538410 SPANXB1Q9NS25 103 aaPredicted RBP13.46□□□□□ -0.26
COPS7A-208ENST00000538410 HECTD4Q9Y4D8 3996 aa13.45□□□□□ -0.26
COPS7A-208ENST00000538410 C14orf177Q52M58 125 aa13.45□□□□□ -0.26
COPS7A-208ENST00000538410 ERG28Q9UKR5 140 aa13.45□□□□□ -0.26
COPS7A-208ENST00000538410 DNAH17Q9UFH2 4485 aa13.44□□□□□ -0.26
COPS7A-208ENST00000538410 LINC00587B1AMM8 73 aa13.44□□□□□ -0.26
COPS7A-208ENST00000538410 SMIM13P0DJ93 91 aa13.44□□□□□ -0.26
COPS7A-208ENST00000538410 SYCNQ0VAF6 134 aa13.44□□□□□ -0.26
COPS7A-208ENST00000538410 Q6ZRU5 148 aa13.44□□□□□ -0.26
COPS7A-208ENST00000538410 TRBV30A0A0K0K1B3 111 aa13.43□□□□□ -0.26
COPS7A-208ENST00000538410 ADAMTSL4-AS1Q5T5F5 129 aa13.43□□□□□ -0.26
COPS7A-208ENST00000538410 C6orf48Q9UBA6 75 aa13.43□□□□□ -0.26
COPS7A-208ENST00000538410 FAT2Q9NYQ8 4349 aa13.43□□□□□ -0.26
COPS7A-208ENST00000538410 A0A0U1RRA0 63 aa13.42□□□□□ -0.26
COPS7A-208ENST00000538410 SLPIP03973 132 aa13.42□□□□□ -0.26
COPS7A-208ENST00000538410 PFN2P35080 140 aa13.42□□□□□ -0.26
COPS7A-208ENST00000538410 SRSF9Q13242 221 aaKnown RBP eCLIP13.42□□□□□ -0.26
COPS7A-208ENST00000538410 C9orf116Q5BN46 136 aaPredicted RBP13.42□□□□□ -0.26
COPS7A-208ENST00000538410 HIST1H4GQ99525 98 aa13.42□□□□□ -0.26
COPS7A-208ENST00000538410 LINC00158P58513 81 aa13.41□□□□□ -0.26
COPS7A-208ENST00000538410 HSD52Q0P140 79 aa13.41□□□□□ -0.26
COPS7A-208ENST00000538410 COX17Q14061 63 aa13.41□□□□□ -0.26
COPS7A-208ENST00000538410 TAL2Q16559 108 aa13.41□□□□□ -0.26
COPS7A-208ENST00000538410 SPANXDQ9BXN6 97 aa13.41□□□□□ -0.26
COPS7A-208ENST00000538410 SPANXCQ9NY87 97 aa13.41□□□□□ -0.26
COPS7A-208ENST00000538410 CARD19Q96LW7 228 aa13.4□□□□□ -0.26
COPS7A-208ENST00000538410 A0A087WTM6 91 aa13.39□□□□□ -0.27
COPS7A-208ENST00000538410 DAND5Q8N907 189 aa13.39□□□□□ -0.27
COPS7A-208ENST00000538410 RNF151Q2KHN1 245 aa13.39□□□□□ -0.27
COPS7A-208ENST00000538410 Q6ZVH6 145 aa13.39□□□□□ -0.27
COPS7A-208ENST00000538410 MIR7-3HGQ8N6C7 128 aa13.38□□□□□ -0.27
COPS7A-208ENST00000538410 CNBPP62633 177 aaKnown RBP13.37□□□□□ -0.27
COPS7A-208ENST00000538410 Q8N814 137 aa13.37□□□□□ -0.27
COPS7A-208ENST00000538410 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.35□□□□□ -0.27
COPS7A-208ENST00000538410 CEND1Q8N111 149 aa13.35□□□□□ -0.27
COPS7A-208ENST00000538410 HINT1P49773 126 aaPredicted RBP13.35□□□□□ -0.27
COPS7A-208ENST00000538410 TNP2Q05952 138 aa13.35□□□□□ -0.27
COPS7A-208ENST00000538410 MUSTN1Q8IVN3 82 aa13.35□□□□□ -0.27
COPS7A-208ENST00000538410 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.34□□□□□ -0.27
COPS7A-208ENST00000538410 IFITM1P13164 125 aa13.34□□□□□ -0.27
COPS7A-208ENST00000538410 GCSHP23434 173 aa13.34□□□□□ -0.27
COPS7A-208ENST00000538410 NPC2P61916 151 aa13.34□□□□□ -0.27
COPS7A-208ENST00000538410 M0R143 59 aa13.33□□□□□ -0.28
COPS7A-208ENST00000538410 PTTG1IPP53801 180 aa13.33□□□□□ -0.28
COPS7A-208ENST00000538410 BVES-AS1Q5T3Y7 98 aa13.33□□□□□ -0.28
COPS7A-208ENST00000538410 LINC00308Q8TCZ7 52 aa13.33□□□□□ -0.28
COPS7A-208ENST00000538410 PKD1P98161 4303 aa13.32□□□□□ -0.28
COPS7A-208ENST00000538410 NDUFC2-KCTD14E9PQ53 114 aa13.32□□□□□ -0.28
COPS7A-208ENST00000538410 EIF4EBP3O60516 100 aaPredicted RBP13.31□□□□□ -0.28
COPS7A-208ENST00000538410 SOSTDC1Q6X4U4 206 aa13.31□□□□□ -0.28
COPS7A-208ENST00000538410 TLX1NBP0CAT3 122 aa13.31□□□□□ -0.28
COPS7A-208ENST00000538410 FXYD2P54710 66 aa13.31□□□□□ -0.28
COPS7A-208ENST00000538410 COPS9Q8WXC6 57 aa13.31□□□□□ -0.28
COPS7A-208ENST00000538410 HERC2O95714 4834 aa13.3□□□□□ -0.28
COPS7A-208ENST00000538410 SND1-IT1Q9HBX3 110 aa13.3□□□□□ -0.28
COPS7A-208ENST00000538410 PKHD1P08F94 4074 aa13.29□□□□□ -0.28
COPS7A-208ENST00000538410 EREGO14944 169 aa13.29□□□□□ -0.28
COPS7A-208ENST00000538410 PPDPFQ9H3Y8 114 aa13.29□□□□□ -0.28
COPS7A-208ENST00000538410 KIAA1109Q2LD37 5005 aa13.28□□□□□ -0.28
COPS7A-208ENST00000538410 RPL24P83731 157 aaKnown RBP13.28□□□□□ -0.28
COPS7A-208ENST00000538410 Q6ZRP5 223 aa13.28□□□□□ -0.28
COPS7A-208ENST00000538410 LOC107984156A0A0G2JMH3 177 aa13.28□□□□□ -0.28
COPS7A-208ENST00000538410 BATFQ16520 125 aa13.28□□□□□ -0.28
COPS7A-208ENST00000538410 ARL17AQ8IVW1 177 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms