RNA–Protein interactions for RNA: ENST00000537267.5

USP5-204, Transcript of ubiquitin specific peptidase 5, human

TSL 5

Gene USP5, Length 2,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP5-204	ENST00000537267	LY6G6D	O95868	133 aa		10.14	□□□□□ -0.79
USP5-204	ENST00000537267	LINC00167	Q96N53	147 aa		10.14	□□□□□ -0.79
USP5-204	ENST00000537267	EPM2A	B3EWF7	344 aa		10.14	□□□□□ -0.79
USP5-204	ENST00000537267	IGHV4-61	A0A0C4DH41	118 aa		10.13	□□□□□ -0.79
USP5-204	ENST00000537267	TRBV6-4	A0A1B0GX49	114 aa		10.13	□□□□□ -0.79
USP5-204	ENST00000537267	UBL5	Q9BZL1	73 aa		10.13	□□□□□ -0.79
USP5-204	ENST00000537267	TRGV1	A0A0A0MS02	117 aa		10.12	□□□□□ -0.79
USP5-204	ENST00000537267	PRO0628	Q9UI54	55 aa		10.12	□□□□□ -0.79
USP5-204	ENST00000537267	BCE1	O60756	84 aa		10.12	□□□□□ -0.79
USP5-204	ENST00000537267	TMEM256-PLSCR3	K7ERE1	68 aa		10.11	□□□□□ -0.79
USP5-204	ENST00000537267	TRAV7	A0A075B6U4	112 aa		10.1	□□□□□ -0.79
USP5-204	ENST00000537267	MAP6D1	Q9H9H5	199 aa		10.1	□□□□□ -0.79
USP5-204	ENST00000537267		H7BZZ5	65 aa		10.09	□□□□□ -0.79
USP5-204	ENST00000537267	IL17D	Q8TAD2	202 aa		10.09	□□□□□ -0.79
USP5-204	ENST00000537267		Q8N814	137 aa		10.09	□□□□□ -0.79
USP5-204	ENST00000537267	UBE2E2	Q96LR5	201 aa		10.08	□□□□□ -0.8
USP5-204	ENST00000537267	IGKV3OR2-268	A0A0C4DH90	116 aa		10.08	□□□□□ -0.8
USP5-204	ENST00000537267	IGHV4-59	P01825	116 aa		10.07	□□□□□ -0.8
USP5-204	ENST00000537267	ITPR3	Q14573	2671 aa		10.07	□□□□□ -0.8
USP5-204	ENST00000537267	HIVEP1	P15822	2718 aa		10.07	□□□□□ -0.8
USP5-204	ENST00000537267	MSMB	P08118	114 aa		10.07	□□□□□ -0.8
USP5-204	ENST00000537267	SLURP1	P55000	103 aa		10.07	□□□□□ -0.8
USP5-204	ENST00000537267	IGHV3OR16-9	A0A0B4J2B5	98 aa		10.06	□□□□□ -0.8
USP5-204	ENST00000537267	LINC00336	Q6ZUF6	198 aa		10.06	□□□□□ -0.8
USP5-204	ENST00000537267	TMEM86B	Q8N661	226 aa		10.06	□□□□□ -0.8
USP5-204	ENST00000537267		A0A087WZ39	114 aa		10.06	□□□□□ -0.8
USP5-204	ENST00000537267	KLKP1	Q107X0	134 aa		10.06	□□□□□ -0.8
USP5-204	ENST00000537267		Q6ZTI0	123 aa		10.05	□□□□□ -0.8
USP5-204	ENST00000537267	ZAN	Q9Y493	2812 aa		10.05	□□□□□ -0.8
USP5-204	ENST00000537267	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	10.04	□□□□□ -0.8	2e-7	■■□□□ 11.4
USP5-204	ENST00000537267	ACAN	P16112	2415 aa		10.04	□□□□□ -0.8
USP5-204	ENST00000537267	SMIM26	A0A096LP01	95 aa		10.04	□□□□□ -0.8
USP5-204	ENST00000537267	DEFB112	Q30KQ8	113 aa		10.03	□□□□□ -0.8
USP5-204	ENST00000537267	DYNLRB2	Q8TF09	96 aa		10.03	□□□□□ -0.8
USP5-204	ENST00000537267	AVP	P01185	164 aa		10.03	□□□□□ -0.8
USP5-204	ENST00000537267	C6orf226	Q5I0X4	101 aa		10.03	□□□□□ -0.8
USP5-204	ENST00000537267	C1orf158	Q8N1D5	194 aa		10.03	□□□□□ -0.8
USP5-204	ENST00000537267	FLNA	P21333	2647 aa	Known RBP	10.02	□□□□□ -0.8
USP5-204	ENST00000537267	DEFB136	Q30KP8	78 aa		10.02	□□□□□ -0.8
USP5-204	ENST00000537267	LINC00482	Q8N8I6	264 aa		10.02	□□□□□ -0.8
USP5-204	ENST00000537267	IGLV4-60	A0A075B6I1	120 aa		10.02	□□□□□ -0.81
USP5-204	ENST00000537267	NANOS2	P60321	138 aa	Known RBP	10.02	□□□□□ -0.81
USP5-204	ENST00000537267	C11orf68	Q9H3H3	251 aa	Known RBP	10.02	□□□□□ -0.81
USP5-204	ENST00000537267	F8	P00451	2351 aa		10.01	□□□□□ -0.81
USP5-204	ENST00000537267		A0A096LNT2	108 aa		10.01	□□□□□ -0.81
USP5-204	ENST00000537267	RNASE1	P07998	156 aa	Known RBP	10.01	□□□□□ -0.81
USP5-204	ENST00000537267		Q6ZQT0	140 aa		10.01	□□□□□ -0.81
USP5-204	ENST00000537267	C1orf43	Q9BWL3	253 aa		10.01	□□□□□ -0.81
USP5-204	ENST00000537267		A0A1W2PRX2	142 aa		10	□□□□□ -0.81
USP5-204	ENST00000537267		J3QLI3	93 aa		10	□□□□□ -0.81
USP5-204	ENST00000537267	STH	Q8IWL8	128 aa		10	□□□□□ -0.81
USP5-204	ENST00000537267	C11orf44	Q8N8P7	122 aa		10	□□□□□ -0.81
USP5-204	ENST00000537267	C16orf95	Q9H693	158 aa		10	□□□□□ -0.81
USP5-204	ENST00000537267	MTOR	P42345	2549 aa		10	□□□□□ -0.81
USP5-204	ENST00000537267	IGHV4-30-2	A0A087WSY4	118 aa		9.99	□□□□□ -0.81
USP5-204	ENST00000537267		F8WEM9	126 aa		9.99	□□□□□ -0.81
USP5-204	ENST00000537267	LINC01547	P58512	204 aa	Predicted RBP	9.99	□□□□□ -0.81
USP5-204	ENST00000537267	RBM3	P98179	157 aa	Known RBP	9.99	□□□□□ -0.81
USP5-204	ENST00000537267	LOC110117498	A0A087WWA1	95 aa		9.99	□□□□□ -0.81
USP5-204	ENST00000537267	LOC100131303	A0A0U1RQF7	123 aa		9.99	□□□□□ -0.81
USP5-204	ENST00000537267	C18orf65	Q6ZTR6	163 aa		9.99	□□□□□ -0.81
USP5-204	ENST00000537267	RMI2	Q96E14	147 aa		9.99	□□□□□ -0.81
USP5-204	ENST00000537267	SNURF	Q9Y675	71 aa		9.99	□□□□□ -0.81
USP5-204	ENST00000537267	FP248	Q71RG6	208 aa	Predicted RBP	9.98	□□□□□ -0.81
USP5-204	ENST00000537267		B4DSR2	109 aa		9.98	□□□□□ -0.81
USP5-204	ENST00000537267	NDUFC1	O43677	76 aa		9.98	□□□□□ -0.81
USP5-204	ENST00000537267	CCL19	Q99731	98 aa		9.98	□□□□□ -0.81
USP5-204	ENST00000537267	NOP10	Q9NPE3	64 aa	Known RBP	9.98	□□□□□ -0.81
USP5-204	ENST00000537267	TRAV10	A0A0B4J240	114 aa		9.97	□□□□□ -0.81
USP5-204	ENST00000537267	ZNF561-AS1	K7EIQ3	104 aa		9.97	□□□□□ -0.81
USP5-204	ENST00000537267	ATP5E	P56381	51 aa	Predicted RBP	9.97	□□□□□ -0.81
USP5-204	ENST00000537267	HAMP	P81172	84 aa		9.97	□□□□□ -0.81
USP5-204	ENST00000537267	DEFB114	Q30KQ6	69 aa		9.97	□□□□□ -0.81
USP5-204	ENST00000537267	ZNF702P	Q9H963	129 aa		9.97	□□□□□ -0.81
USP5-204	ENST00000537267	TRBV6-8	A0A0A6YYG3	113 aa		9.97	□□□□□ -0.81
USP5-204	ENST00000537267		Q8IZM0	81 aa		9.97	□□□□□ -0.81
USP5-204	ENST00000537267	SETD2	Q9BYW2	2564 aa	Predicted RBP	9.96	□□□□□ -0.81
USP5-204	ENST00000537267	LINC00959	A0A1B0GUT2	108 aa		9.96	□□□□□ -0.81
USP5-204	ENST00000537267		Q6ZVQ6	151 aa		9.96	□□□□□ -0.81
USP5-204	ENST00000537267	TRGV2	A0A075B6R0	118 aa		9.96	□□□□□ -0.82
USP5-204	ENST00000537267	PRR3	P79522	188 aa	Known RBP	9.96	□□□□□ -0.82
USP5-204	ENST00000537267	CXCL6	P80162	114 aa		9.95	□□□□□ -0.82
USP5-204	ENST00000537267	ODF3L2	Q3SX64	289 aa		9.95	□□□□□ -0.82
USP5-204	ENST00000537267	C6orf223	Q8N319	242 aa		9.95	□□□□□ -0.82
USP5-204	ENST00000537267	NIPBL	Q6KC79	2804 aa	eCLIP	9.95	□□□□□ -0.82
USP5-204	ENST00000537267	LAMTOR3	Q9UHA4	124 aa		9.95	□□□□□ -0.82
USP5-204	ENST00000537267	TRBV7-6	A0A0J9YX20	115 aa		9.94	□□□□□ -0.82
USP5-204	ENST00000537267	C6orf99	Q4VX62	202 aa		9.94	□□□□□ -0.82
USP5-204	ENST00000537267	KHDC1L	Q5JSQ8	128 aa		9.94	□□□□□ -0.82
USP5-204	ENST00000537267	LINC00575	Q6W349	94 aa		9.94	□□□□□ -0.82
USP5-204	ENST00000537267	TLN2	Q9Y4G6	2542 aa		9.94	□□□□□ -0.82
USP5-204	ENST00000537267	TRGV4	A0A0C4DH28	118 aa		9.94	□□□□□ -0.82
USP5-204	ENST00000537267	RPL35A	P18077	110 aa	Known RBP	9.94	□□□□□ -0.82
USP5-204	ENST00000537267	WFDC11	Q8NEX6	87 aa		9.94	□□□□□ -0.82
USP5-204	ENST00000537267	NF1	P21359	2839 aa		9.93	□□□□□ -0.82
USP5-204	ENST00000537267	PKIG	Q9Y2B9	76 aa		9.93	□□□□□ -0.82
USP5-204	ENST00000537267	CUBN	O60494	3623 aa		9.92	□□□□□ -0.82
USP5-204	ENST00000537267	PDE6G	P18545	87 aa		9.92	□□□□□ -0.82
USP5-204	ENST00000537267	COX17	Q14061	63 aa		9.92	□□□□□ -0.82
USP5-204	ENST00000537267	C4orf3	Q8WVX3	66 aa		9.92	□□□□□ -0.82

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms