RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 C2orf48Q96LS8 159 aa12.94□□□□□ -0.34
SFSWAP-203ENST00000535236 A0A1W2PPR1 153 aa12.94□□□□□ -0.34
SFSWAP-203ENST00000535236 PRYO14603 147 aa12.94□□□□□ -0.34
SFSWAP-203ENST00000535236 LINC01547P58512 204 aaPredicted RBP12.93□□□□□ -0.34
SFSWAP-203ENST00000535236 TRBV7-6A0A0J9YX20 115 aa12.92□□□□□ -0.34
SFSWAP-203ENST00000535236 XGP55808 180 aa12.92□□□□□ -0.34
SFSWAP-203ENST00000535236 BEAN1Q3B7T3 259 aa12.92□□□□□ -0.34
SFSWAP-203ENST00000535236 TRAV7A0A075B6U4 112 aa12.92□□□□□ -0.34
SFSWAP-203ENST00000535236 CCDC179H3BU77 68 aa12.91□□□□□ -0.34
SFSWAP-203ENST00000535236 NHLRC4P0CG21 123 aaPredicted RBP12.91□□□□□ -0.34
SFSWAP-203ENST00000535236 Q6Q795 121 aa12.91□□□□□ -0.34
SFSWAP-203ENST00000535236 AMELXQ99217 191 aa12.91□□□□□ -0.34
SFSWAP-203ENST00000535236 A0A1B0GUV1 79 aa12.91□□□□□ -0.34
SFSWAP-203ENST00000535236 DOPEY1Q5JWR5 2465 aa12.9□□□□□ -0.34
SFSWAP-203ENST00000535236 TSPEAR-AS2P59090 65 aa12.9□□□□□ -0.34
SFSWAP-203ENST00000535236 HCFC1P51610 2035 aa12.9□□□□□ -0.34
SFSWAP-203ENST00000535236 A0A087WSZ3 146 aa12.89□□□□□ -0.35
SFSWAP-203ENST00000535236 Q6ZSN1 163 aa12.89□□□□□ -0.35
SFSWAP-203ENST00000535236 MUC22E2RYF6 1773 aaPredicted RBP12.88□□□□□ -0.35
SFSWAP-203ENST00000535236 NCOR2Q9Y618 2525 aa12.88□□□□□ -0.35
SFSWAP-203ENST00000535236 ADAMTSL4-AS1Q5T5F5 129 aa12.88□□□□□ -0.35
SFSWAP-203ENST00000535236 LINC00575Q6W349 94 aa12.87□□□□□ -0.35
SFSWAP-203ENST00000535236 URB1-AS1Q96HZ7 61 aa12.87□□□□□ -0.35
SFSWAP-203ENST00000535236 C10orf142B7Z368 130 aa12.87□□□□□ -0.35
SFSWAP-203ENST00000535236 LIMD2Q9BT23 127 aa12.86□□□□□ -0.35
SFSWAP-203ENST00000535236 PCOTHQ58A44 107 aa12.86□□□□□ -0.35
SFSWAP-203ENST00000535236 C2CD3Q4AC94 2353 aa12.86□□□□□ -0.35
SFSWAP-203ENST00000535236 SPINK1P00995 79 aa12.86□□□□□ -0.35
SFSWAP-203ENST00000535236 ARHGAP32A7KAX9 2087 aa12.86□□□□□ -0.35
SFSWAP-203ENST00000535236 Q6ZRU5 148 aa12.85□□□□□ -0.35
SFSWAP-203ENST00000535236 A0A087WVE0 104 aa12.84□□□□□ -0.35
SFSWAP-203ENST00000535236 FHL3Q13643 280 aa12.84□□□□□ -0.35
SFSWAP-203ENST00000535236 LINC01561Q8N1V8 128 aa12.84□□□□□ -0.35
SFSWAP-203ENST00000535236 SMIM26A0A096LP01 95 aa12.84□□□□□ -0.35
SFSWAP-203ENST00000535236 COX8CQ7Z4L0 72 aa12.83□□□□□ -0.36
SFSWAP-203ENST00000535236 DEFB116Q30KQ4 102 aa12.83□□□□□ -0.36
SFSWAP-203ENST00000535236 PRLHP81277 87 aa12.82□□□□□ -0.36
SFSWAP-203ENST00000535236 Q8N2B8 174 aa12.82□□□□□ -0.36
SFSWAP-203ENST00000535236 Q8N3U1 123 aa12.81□□□□□ -0.36
SFSWAP-203ENST00000535236 IGF2RP11717 2491 aa12.81□□□□□ -0.36
SFSWAP-203ENST00000535236 H0Y9P7 68 aa12.81□□□□□ -0.36
SFSWAP-203ENST00000535236 RAI1Q7Z5J4 1906 aaPredicted RBP12.8□□□□□ -0.36
SFSWAP-203ENST00000535236 LINC00310P59036 64 aa12.8□□□□□ -0.36
SFSWAP-203ENST00000535236 PIEZO1Q92508 2521 aa12.8□□□□□ -0.36
SFSWAP-203ENST00000535236 SBSPONQ8IVN8 264 aa12.8□□□□□ -0.36
SFSWAP-203ENST00000535236 LRP4O75096 1905 aa12.79□□□□□ -0.36
SFSWAP-203ENST00000535236 ATG2AQ2TAZ0 1938 aa12.79□□□□□ -0.36
SFSWAP-203ENST00000535236 TRBV7-7A0A0K0K1E9 115 aa12.78□□□□□ -0.36
SFSWAP-203ENST00000535236 C22orf24Q9Y442 160 aa12.78□□□□□ -0.36
SFSWAP-203ENST00000535236 SMCR5Q8TEV8 140 aa12.78□□□□□ -0.36
SFSWAP-203ENST00000535236 SOSTDC1Q6X4U4 206 aa12.78□□□□□ -0.36
SFSWAP-203ENST00000535236 LINC00337Q8N6G1 96 aa12.77□□□□□ -0.36
SFSWAP-203ENST00000535236 HCG22E2RYF7 251 aa12.77□□□□□ -0.37
SFSWAP-203ENST00000535236 MDFIQ99750 246 aa12.76□□□□□ -0.37
SFSWAP-203ENST00000535236 A8MTW9 85 aa12.76□□□□□ -0.37
SFSWAP-203ENST00000535236 EXPH5Q8NEV8 1989 aa12.75□□□□□ -0.37
SFSWAP-203ENST00000535236 PIEZO2Q9H5I5 2752 aa12.73□□□□□ -0.37
SFSWAP-203ENST00000535236 C1orf195Q5TG92 126 aa12.73□□□□□ -0.37
SFSWAP-203ENST00000535236 A0A096LNJ9 63 aa12.7□□□□□ -0.38
SFSWAP-203ENST00000535236 IGKV2D-30A0A075B6S6 120 aa12.69□□□□□ -0.38
SFSWAP-203ENST00000535236 IGKV2-30P06310 120 aa12.69□□□□□ -0.38
SFSWAP-203ENST00000535236 C11orf72Q8NBR9 251 aa12.68□□□□□ -0.38
SFSWAP-203ENST00000535236 PMAIP1Q13794 54 aa12.68□□□□□ -0.38
SFSWAP-203ENST00000535236 EML5Q05BV3 1969 aa12.66□□□□□ -0.38
SFSWAP-203ENST00000535236 SPACA4Q8TDM5 124 aa12.66□□□□□ -0.38
SFSWAP-203ENST00000535236 MYO9AB2RTY4 2548 aa12.66□□□□□ -0.38
SFSWAP-203ENST00000535236 COL5A1P20908 1838 aaPredicted RBP12.65□□□□□ -0.38
SFSWAP-203ENST00000535236 hDV103S1A0JD37 113 aa12.65□□□□□ -0.38
SFSWAP-203ENST00000535236 KIAA0087Q14695 138 aa12.65□□□□□ -0.38
SFSWAP-203ENST00000535236 TMEM254Q8TBM7 123 aa12.65□□□□□ -0.38
SFSWAP-203ENST00000535236 PSPHP1O15172 72 aa12.64□□□□□ -0.39
SFSWAP-203ENST00000535236 CRYGAP11844 174 aa12.64□□□□□ -0.39
SFSWAP-203ENST00000535236 LINC00846Q9NV44 126 aa12.64□□□□□ -0.39
SFSWAP-203ENST00000535236 KIF25-AS1Q9Y6Z4 181 aa12.64□□□□□ -0.39
SFSWAP-203ENST00000535236 C1orf64Q8NEQ6 169 aa12.63□□□□□ -0.39
SFSWAP-203ENST00000535236 PTPRSQ13332 1948 aa12.63□□□□□ -0.39
SFSWAP-203ENST00000535236 MOBPQ13875 183 aa12.62□□□□□ -0.39
SFSWAP-203ENST00000535236 C7orf65Q6ZTY9 151 aa12.62□□□□□ -0.39
SFSWAP-203ENST00000535236 LINC00167Q96N53 147 aa12.62□□□□□ -0.39
SFSWAP-203ENST00000535236 JMJD1CQ15652 2540 aa12.6□□□□□ -0.39
SFSWAP-203ENST00000535236 IGLV5-39A0A0G2JS06 123 aa12.6□□□□□ -0.39
SFSWAP-203ENST00000535236 CXCL6P80162 114 aa12.6□□□□□ -0.39
SFSWAP-203ENST00000535236 AGRNO00468 2067 aa12.6□□□□□ -0.39
SFSWAP-203ENST00000535236 IGHV3OR16-9A0A0B4J2B5 98 aa12.59□□□□□ -0.39
SFSWAP-203ENST00000535236 FAM229AH3BQW9 127 aa12.59□□□□□ -0.39
SFSWAP-203ENST00000535236 C6orf48Q9UBA6 75 aa12.57□□□□□ -0.4
SFSWAP-203ENST00000535236 CPAMD8Q8IZJ3 1885 aa12.56□□□□□ -0.4
SFSWAP-203ENST00000535236 ADAMTS20P59510 1910 aa12.56□□□□□ -0.4
SFSWAP-203ENST00000535236 H3BNG1 76 aa12.56□□□□□ -0.4
SFSWAP-203ENST00000535236 SMIM29Q86T20 159 aa12.55□□□□□ -0.4
SFSWAP-203ENST00000535236 SPATA3Q8NHX4 192 aa12.55□□□□□ -0.4
SFSWAP-203ENST00000535236 LINC00315P59091 139 aa12.53□□□□□ -0.4
SFSWAP-203ENST00000535236 TP53AIP1Q9HCN2 124 aa12.53□□□□□ -0.4
SFSWAP-203ENST00000535236 RTL8CO15255 209 aa12.53□□□□□ -0.4
SFSWAP-203ENST00000535236 KRTAP24-1Q3LI83 254 aa12.53□□□□□ -0.4
SFSWAP-203ENST00000535236 PHF5AQ7RTV0 110 aaKnown RBP12.51□□□□□ -0.41
SFSWAP-203ENST00000535236 FAM19A4Q96LR4 140 aa12.51□□□□□ -0.41
SFSWAP-203ENST00000535236 Q9UF83 564 aa12.51□□□□□ -0.41
SFSWAP-203ENST00000535236 NBDYA0A0U1RRE5 68 aa12.49□□□□□ -0.41
SFSWAP-203ENST00000535236 TLN1Q9Y490 2541 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms