RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 NTM-AS1Q6ZSK4 140 aa2.13□□□□□ -2.07
CSDE1-216ENST00000534389 KRTAP7-1Q8IUC3 87 aa2.13□□□□□ -2.07
CSDE1-216ENST00000534389 Q8N377 158 aa2.13□□□□□ -2.07
CSDE1-216ENST00000534389 LINC00612Q8N6U2 182 aa2.13□□□□□ -2.07
CSDE1-216ENST00000534389 Q8N814 137 aa2.13□□□□□ -2.07
CSDE1-216ENST00000534389 Q8NDZ9 215 aa2.13□□□□□ -2.07
CSDE1-216ENST00000534389 C1orf64Q8NEQ6 169 aa2.13□□□□□ -2.07
CSDE1-216ENST00000534389 ZCCHC13Q8WW36 166 aaKnown RBP2.13□□□□□ -2.07
CSDE1-216ENST00000534389 HIGD2AQ9BW72 106 aa2.13□□□□□ -2.07
CSDE1-216ENST00000534389 UBL5Q9BZL1 73 aa2.13□□□□□ -2.07
CSDE1-216ENST00000534389 C11orf68Q9H3H3 251 aaKnown RBP2.13□□□□□ -2.07
CSDE1-216ENST00000534389 WNK2Q9Y3S1 2297 aa2.13□□□□□ -2.07
CSDE1-216ENST00000534389 RANBP2P49792 3224 aaKnown RBP2.13□□□□□ -2.07
CSDE1-216ENST00000534389 ABCA4P78363 2273 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 BRCA2P51587 3418 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 LCE6AA0A183 80 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 RPL37AP8A6NKH3 93 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 A6NN06 94 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 C16orf90A8MZG2 172 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 JMJD7-PLA2G4BH0Y9G9 81 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 BPY2O14599 106 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 IGKV4-1P06312 121 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 LINC00158P58513 81 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 LMO4P61968 165 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 CXCL6P80162 114 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 SYCNQ0VAF6 134 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 LPAL2Q16609 132 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 SPINK13Q1W4C9 94 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 C9orf66Q5T8R8 295 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 MRPL55Q7Z7F7 128 aaKnown RBP2.12□□□□□ -2.07
CSDE1-216ENST00000534389 Q8N9L7 120 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 MAPK1IP1LQ8NDC0 245 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 COX7B2Q8TF08 81 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 UBE2E2Q96LR5 201 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 RHPN1-AS1Q9BWJ2 59 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 LAMTOR3Q9UHA4 124 aa2.12□□□□□ -2.07
CSDE1-216ENST00000534389 USP34Q70CQ2 3546 aa2.11□□□□□ -2.07
CSDE1-216ENST00000534389 ROS1P08922 2347 aa2.11□□□□□ -2.07
CSDE1-216ENST00000534389 IGLV4-60A0A075B6I1 120 aa2.11□□□□□ -2.07
CSDE1-216ENST00000534389 C8orf87E5RJ46 101 aa2.11□□□□□ -2.07
CSDE1-216ENST00000534389 NDUFA4O00483 81 aa2.11□□□□□ -2.07
CSDE1-216ENST00000534389 LY6HO94772 140 aa2.11□□□□□ -2.07
CSDE1-216ENST00000534389 IGHV3-53P01767 116 aa2.11□□□□□ -2.07
CSDE1-216ENST00000534389 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.11□□□□□ -2.07
CSDE1-216ENST00000534389 LINC00575Q6W349 94 aa2.11□□□□□ -2.07
CSDE1-216ENST00000534389 LCA10Q71F78 164 aa2.11□□□□□ -2.07
CSDE1-216ENST00000534389 KTN1-AS1Q86SY8 53 aa2.11□□□□□ -2.07
CSDE1-216ENST00000534389 FDCSPQ8NFU4 85 aa2.11□□□□□ -2.07
CSDE1-216ENST00000534389 LINC01006Q8NI28 216 aa2.11□□□□□ -2.07
CSDE1-216ENST00000534389 CDC42SE2Q9NRR3 84 aa2.11□□□□□ -2.07
CSDE1-216ENST00000534389 PCNX1Q96RV3 2341 aa2.11□□□□□ -2.07
CSDE1-216ENST00000534389 CEP250Q9BV73 2442 aa2.1□□□□□ -2.07
CSDE1-216ENST00000534389 VCANP13611 3396 aa2.1□□□□□ -2.07
CSDE1-216ENST00000534389 A8MTW9 85 aa2.1□□□□□ -2.07
CSDE1-216ENST00000534389 TMEM256-PLSCR3K7ERE1 68 aa2.1□□□□□ -2.07
CSDE1-216ENST00000534389 PSCAO43653 123 aa2.1□□□□□ -2.07
CSDE1-216ENST00000534389 IGHV3-11P01762 117 aa2.1□□□□□ -2.07
CSDE1-216ENST00000534389 APOC4P55056 127 aa2.1□□□□□ -2.07
CSDE1-216ENST00000534389 KRTAP10-6P60371 365 aaPredicted RBP2.1□□□□□ -2.07
CSDE1-216ENST00000534389 KRTAP10-7P60409 375 aaPredicted RBP2.1□□□□□ -2.07
CSDE1-216ENST00000534389 REG3GQ6UW15 175 aa2.1□□□□□ -2.07
CSDE1-216ENST00000534389 C5orf56Q8N8D9 126 aa2.1□□□□□ -2.07
CSDE1-216ENST00000534389 MUC7Q8TAX7 377 aa2.1□□□□□ -2.07
CSDE1-216ENST00000534389 MINOS1-NBL1R4GNA1 71 aa2.1□□□□□ -2.07
CSDE1-216ENST00000534389 MKI67P46013 3256 aaKnown RBP2.1□□□□□ -2.07
CSDE1-216ENST00000534389 WDR87Q6ZQQ6 2873 aa2.1□□□□□ -2.07
CSDE1-216ENST00000534389 PKDREJQ9NTG1 2253 aa2.1□□□□□ -2.07
CSDE1-216ENST00000534389 IGHV3OR16-9A0A0B4J2B5 98 aa2.09□□□□□ -2.07
CSDE1-216ENST00000534389 KRTAP16-1A8MUX0 517 aa2.09□□□□□ -2.07
CSDE1-216ENST00000534389 K7EMT4 169 aa2.09□□□□□ -2.07
CSDE1-216ENST00000534389 ZNF73O43830 326 aaPredicted RBP2.09□□□□□ -2.07
CSDE1-216ENST00000534389 LINC00269Q8N2A0 174 aa2.09□□□□□ -2.07
CSDE1-216ENST00000534389 DYNLRB2Q8TF09 96 aa2.09□□□□□ -2.07
CSDE1-216ENST00000534389 CYP4F30PQ9H0H9 118 aa2.09□□□□□ -2.07
CSDE1-216ENST00000534389 TOMM7Q9P0U1 55 aa2.09□□□□□ -2.07
CSDE1-216ENST00000534389 LAMA3Q16787 3333 aa2.09□□□□□ -2.08
CSDE1-216ENST00000534389 REV3LO60673 3130 aa2.08□□□□□ -2.08
CSDE1-216ENST00000534389 CACNA1BQ00975 2339 aa2.08□□□□□ -2.08
CSDE1-216ENST00000534389 CYSRT1A8MQ03 144 aa2.08□□□□□ -2.08
CSDE1-216ENST00000534389 DSCR10P59022 87 aa2.08□□□□□ -2.08
CSDE1-216ENST00000534389 UBE2BP63146 152 aa2.08□□□□□ -2.08
CSDE1-216ENST00000534389 PRR4Q16378 134 aa2.08□□□□□ -2.08
CSDE1-216ENST00000534389 C6orf99Q4VX62 202 aa2.08□□□□□ -2.08
CSDE1-216ENST00000534389 PHF5AQ7RTV0 110 aaKnown RBP2.08□□□□□ -2.08
CSDE1-216ENST00000534389 ST20-AS1Q8NBB2 130 aa2.08□□□□□ -2.08
CSDE1-216ENST00000534389 CSNK1G2-AS1Q8NCQ2 148 aa2.08□□□□□ -2.08
CSDE1-216ENST00000534389 CELA1Q9UNI1 258 aa2.08□□□□□ -2.08
CSDE1-216ENST00000534389 TRANK1O15050 2925 aa2.08□□□□□ -2.08
CSDE1-216ENST00000534389 DOPEY2Q9Y3R5 2298 aa2.08□□□□□ -2.08
CSDE1-216ENST00000534389 FRYQ5TBA9 3013 aa2.08□□□□□ -2.08
CSDE1-216ENST00000534389 LAMA2P24043 3122 aaKnown RBP2.07□□□□□ -2.08
CSDE1-216ENST00000534389 CFAP47Q6ZTR5 3102 aa2.07□□□□□ -2.08
CSDE1-216ENST00000534389 CNOT1A5YKK6 2376 aaKnown RBP2.07□□□□□ -2.08
CSDE1-216ENST00000534389 TRBV6-8A0A0A6YYG3 113 aa2.07□□□□□ -2.08
CSDE1-216ENST00000534389 LOC100131303A0A0U1RQF7 123 aa2.07□□□□□ -2.08
CSDE1-216ENST00000534389 UBE2L6O14933 153 aa2.07□□□□□ -2.08
CSDE1-216ENST00000534389 NDUFS5O43920 106 aa2.07□□□□□ -2.08
CSDE1-216ENST00000534389 PRB2P02812 416 aaPredicted RBP2.07□□□□□ -2.08
CSDE1-216ENST00000534389 HTN1P15515 57 aa2.07□□□□□ -2.08
CSDE1-216ENST00000534389 DHRS4-AS1Q9P1J3 65 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms