RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 PCLOQ9Y6V0 5065 aa5.69□□□□□ -1.5
CCDC90B-217ENST00000530253 IGLV5-37A0A075B6J1 123 aa5.68□□□□□ -1.5
CCDC90B-217ENST00000530253 IGHV3OR16-9A0A0B4J2B5 98 aa5.68□□□□□ -1.5
CCDC90B-217ENST00000530253 HSBP1O75506 76 aa5.68□□□□□ -1.5
CCDC90B-217ENST00000530253 FUSP35637 526 aaKnown RBP eCLIP5.68□□□□□ -1.5
CCDC90B-217ENST00000530253 Q6ZN92 141 aa5.68□□□□□ -1.5
CCDC90B-217ENST00000530253 SPATA12Q7Z6I5 190 aa5.68□□□□□ -1.5
CCDC90B-217ENST00000530253 FAM19A2Q8N3H0 131 aa5.68□□□□□ -1.5
CCDC90B-217ENST00000530253 VCX2Q9H322 139 aa5.68□□□□□ -1.5
CCDC90B-217ENST00000530253 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.67□□□□□ -1.5
CCDC90B-217ENST00000530253 PRSS1P07477 247 aa5.67□□□□□ -1.5
CCDC90B-217ENST00000530253 COX6A2Q02221 97 aa5.67□□□□□ -1.5
CCDC90B-217ENST00000530253 PAPPA-AS1Q5QFB9 102 aa5.67□□□□□ -1.5
CCDC90B-217ENST00000530253 C2orf88Q9BSF0 95 aa5.67□□□□□ -1.5
CCDC90B-217ENST00000530253 CST9LQ9H4G1 147 aa5.67□□□□□ -1.5
CCDC90B-217ENST00000530253 GVQW2A0A096LPI5 108 aaPredicted RBP5.66□□□□□ -1.5
CCDC90B-217ENST00000530253 A0A0J9YXV3 536 aa5.66□□□□□ -1.5
CCDC90B-217ENST00000530253 ATP5LO75964 103 aa5.66□□□□□ -1.5
CCDC90B-217ENST00000530253 PMVKQ15126 192 aa5.66□□□□□ -1.5
CCDC90B-217ENST00000530253 C5orf38Q86SI9 138 aa5.66□□□□□ -1.5
CCDC90B-217ENST00000530253 IGLV4-69A0A075B6H9 119 aa5.65□□□□□ -1.5
CCDC90B-217ENST00000530253 IGLV5-45A0A087WSX0 123 aa5.65□□□□□ -1.5
CCDC90B-217ENST00000530253 A0A087WZ39 114 aa5.65□□□□□ -1.5
CCDC90B-217ENST00000530253 COX7A2LO14548 114 aa5.65□□□□□ -1.5
CCDC90B-217ENST00000530253 C14orf177Q52M58 125 aa5.65□□□□□ -1.5
CCDC90B-217ENST00000530253 IFI27L1Q96BM0 104 aa5.65□□□□□ -1.5
CCDC90B-217ENST00000530253 FAT1Q14517 4588 aa5.65□□□□□ -1.51
CCDC90B-217ENST00000530253 ABCA13Q86UQ4 5058 aa5.64□□□□□ -1.51
CCDC90B-217ENST00000530253 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.64□□□□□ -1.51
CCDC90B-217ENST00000530253 TRAV12-1A0A0B4J245 112 aa5.64□□□□□ -1.51
CCDC90B-217ENST00000530253 IGHV1-58A0A0C4DH39 117 aa5.64□□□□□ -1.51
CCDC90B-217ENST00000530253 TINCRA0A1B0GVN0 87 aa5.64□□□□□ -1.51
CCDC90B-217ENST00000530253 LEPROTL1O95214 131 aa5.64□□□□□ -1.51
CCDC90B-217ENST00000530253 IGLC3P0DOY3 106 aa5.64□□□□□ -1.51
CCDC90B-217ENST00000530253 CNBPP62633 177 aaKnown RBP5.64□□□□□ -1.51
CCDC90B-217ENST00000530253 HIGD2BQ4VC39 106 aa5.64□□□□□ -1.51
CCDC90B-217ENST00000530253 IGHV3-64A0A075B6Q5 118 aa5.63□□□□□ -1.51
CCDC90B-217ENST00000530253 hDV102S1A0JD36 115 aa5.63□□□□□ -1.51
CCDC90B-217ENST00000530253 NDUFA6P56556 154 aa5.63□□□□□ -1.51
CCDC90B-217ENST00000530253 HERVK_113P63121 156 aa5.63□□□□□ -1.51
CCDC90B-217ENST00000530253 SEC11AP67812 179 aa5.63□□□□□ -1.51
CCDC90B-217ENST00000530253 LINC01561Q8N1V8 128 aa5.63□□□□□ -1.51
CCDC90B-217ENST00000530253 PACRGQ96M98 296 aaPredicted RBP5.63□□□□□ -1.51
CCDC90B-217ENST00000530253 CDKN2A-AS1Q9UH64 79 aa5.63□□□□□ -1.51
CCDC90B-217ENST00000530253 SRRM2Q9UQ35 2752 aaKnown RBP5.62□□□□□ -1.51
CCDC90B-217ENST00000530253 C11orf86A6NJI1 115 aa5.62□□□□□ -1.51
CCDC90B-217ENST00000530253 C16orf90A8MZG2 172 aa5.62□□□□□ -1.51
CCDC90B-217ENST00000530253 SMIM1B2RUZ4 78 aa5.62□□□□□ -1.51
CCDC90B-217ENST00000530253 FABP4P15090 132 aa5.62□□□□□ -1.51
CCDC90B-217ENST00000530253 ZNF22P17026 224 aaPredicted RBP5.62□□□□□ -1.51
CCDC90B-217ENST00000530253 KRTAP10-1P60331 282 aa5.62□□□□□ -1.51
CCDC90B-217ENST00000530253 SPAG11BQ08648 103 aa5.62□□□□□ -1.51
CCDC90B-217ENST00000530253 KIAA0087Q14695 138 aa5.62□□□□□ -1.51
CCDC90B-217ENST00000530253 CFAP161Q6P656 301 aa5.62□□□□□ -1.51
CCDC90B-217ENST00000530253 LINC00526Q96FQ7 95 aa5.62□□□□□ -1.51
CCDC90B-217ENST00000530253 CHAC1Q9BUX1 264 aa5.62□□□□□ -1.51
CCDC90B-217ENST00000530253 LINC01620Q4KN68 170 aa5.61□□□□□ -1.51
CCDC90B-217ENST00000530253 SMIM29Q86T20 159 aa5.61□□□□□ -1.51
CCDC90B-217ENST00000530253 LINC00469Q8N7U9 141 aa5.61□□□□□ -1.51
CCDC90B-217ENST00000530253 OR10D4PQ8NGN7 298 aa5.61□□□□□ -1.51
CCDC90B-217ENST00000530253 ORAOV1Q8WV07 137 aa5.61□□□□□ -1.51
CCDC90B-217ENST00000530253 GEMIN7Q9H840 131 aaKnown RBP5.61□□□□□ -1.51
CCDC90B-217ENST00000530253 MRPL35Q9NZE8 188 aaKnown RBP5.61□□□□□ -1.51
CCDC90B-217ENST00000530253 HSPB8Q9UJY1 196 aa5.61□□□□□ -1.51
CCDC90B-217ENST00000530253 CHTOPQ9Y3Y2 248 aaKnown RBP5.61□□□□□ -1.51
CCDC90B-217ENST00000530253 F8VRH5 84 aa5.6□□□□□ -1.51
CCDC90B-217ENST00000530253 APOMO95445 188 aa5.6□□□□□ -1.51
CCDC90B-217ENST00000530253 HIST3H2BBQ8N257 126 aa5.6□□□□□ -1.51
CCDC90B-217ENST00000530253 C9orf163Q8N9P6 203 aa5.6□□□□□ -1.51
CCDC90B-217ENST00000530253 C2orf48Q96LS8 159 aa5.6□□□□□ -1.51
CCDC90B-217ENST00000530253 Q6ZSA8 131 aa5.59□□□□□ -1.51
CCDC90B-217ENST00000530253 SYS1-DBNDD2H3BUS1 97 aa5.58□□□□□ -1.52
CCDC90B-217ENST00000530253 SPINK8P0C7L1 97 aa5.58□□□□□ -1.52
CCDC90B-217ENST00000530253 PCP4P48539 62 aa5.58□□□□□ -1.52
CCDC90B-217ENST00000530253 SYCNQ0VAF6 134 aa5.58□□□□□ -1.52
CCDC90B-217ENST00000530253 SDIM1Q6ZPB5 146 aa5.58□□□□□ -1.52
CCDC90B-217ENST00000530253 Q6ZRU5 148 aa5.58□□□□□ -1.52
CCDC90B-217ENST00000530253 Q8IZM0 81 aa5.58□□□□□ -1.52
CCDC90B-217ENST00000530253 CARD19Q96LW7 228 aa5.58□□□□□ -1.52
CCDC90B-217ENST00000530253 C5orf52A6NGY3 159 aa5.57□□□□□ -1.52
CCDC90B-217ENST00000530253 F8WDY8 70 aa5.57□□□□□ -1.52
CCDC90B-217ENST00000530253 H0Y8G0 127 aa5.57□□□□□ -1.52
CCDC90B-217ENST00000530253 C3orf79P0CE67 100 aa5.57□□□□□ -1.52
CCDC90B-217ENST00000530253 CAMK2N2Q96S95 79 aa5.57□□□□□ -1.52
CCDC90B-217ENST00000530253 HIST1H2BLQ99880 126 aa5.57□□□□□ -1.52
CCDC90B-217ENST00000530253 PMCHL2Q9BQD1 86 aa5.57□□□□□ -1.52
CCDC90B-217ENST00000530253 MAP1LC3CQ9BXW4 147 aa5.57□□□□□ -1.52
CCDC90B-217ENST00000530253 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.56□□□□□ -1.52
CCDC90B-217ENST00000530253 TMEM223A0PJW6 202 aa5.56□□□□□ -1.52
CCDC90B-217ENST00000530253 H3BRM9 83 aa5.56□□□□□ -1.52
CCDC90B-217ENST00000530253 PANO1I0J062 215 aa5.56□□□□□ -1.52
CCDC90B-217ENST00000530253 CIRBPQ14011 172 aaKnown RBP5.56□□□□□ -1.52
CCDC90B-217ENST00000530253 TMEM170BQ5T4T1 132 aa5.56□□□□□ -1.52
CCDC90B-217ENST00000530253 LINC01545Q5VT33 79 aa5.56□□□□□ -1.52
CCDC90B-217ENST00000530253 PET117Q6UWS5 81 aa5.56□□□□□ -1.52
CCDC90B-217ENST00000530253 C2orf82Q6UX34 121 aa5.56□□□□□ -1.52
CCDC90B-217ENST00000530253 UNQ6190/PRO20217Q6UXQ8 127 aa5.56□□□□□ -1.52
CCDC90B-217ENST00000530253 C6orf48Q9UBA6 75 aa5.56□□□□□ -1.52
CCDC90B-217ENST00000530253 NDUFA1O15239 70 aa5.55□□□□□ -1.52
CCDC90B-217ENST00000530253 CDK2AP2O75956 126 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms