RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 C10orf25Q5T742 122 aa16.17■□□□□ 0.18
LDLRAD3-203ENST00000528989 NDUFA12Q9UI09 145 aa16.17■□□□□ 0.18
LDLRAD3-203ENST00000528989 UNQ6190/PRO20217Q6UXQ8 127 aa16.16■□□□□ 0.18
LDLRAD3-203ENST00000528989 FAT2Q9NYQ8 4349 aa16.16■□□□□ 0.18
LDLRAD3-203ENST00000528989 ZNF625Q96I27 306 aaPredicted RBP16.16■□□□□ 0.18
LDLRAD3-203ENST00000528989 RYR3Q15413 4870 aa16.15■□□□□ 0.18
LDLRAD3-203ENST00000528989 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.15■□□□□ 0.18
LDLRAD3-203ENST00000528989 CKS1BP61024 79 aa16.15■□□□□ 0.18
LDLRAD3-203ENST00000528989 ZNF815PA8K554 130 aa16.13■□□□□ 0.17
LDLRAD3-203ENST00000528989 CAMK2N2Q96S95 79 aa16.13■□□□□ 0.17
LDLRAD3-203ENST00000528989 FUSP35637 526 aaKnown RBP eCLIP16.12■□□□□ 0.17
LDLRAD3-203ENST00000528989 Q8N814 137 aa16.12■□□□□ 0.17
LDLRAD3-203ENST00000528989 COX8AP10176 69 aa16.12■□□□□ 0.17
LDLRAD3-203ENST00000528989 Q6ZRU5 148 aa16.12■□□□□ 0.17
LDLRAD3-203ENST00000528989 PRO1933Q9H354 126 aa16.12■□□□□ 0.17
LDLRAD3-203ENST00000528989 NDUFA1O15239 70 aa16.11■□□□□ 0.17
LDLRAD3-203ENST00000528989 C9orf116Q5BN46 136 aaPredicted RBP16.11■□□□□ 0.17
LDLRAD3-203ENST00000528989 MYMXA0A1B0GTQ4 84 aa16.1■□□□□ 0.17
LDLRAD3-203ENST00000528989 C2orf48Q96LS8 159 aa16.1■□□□□ 0.17
LDLRAD3-203ENST00000528989 SYCNQ0VAF6 134 aa16.08■□□□□ 0.17
LDLRAD3-203ENST00000528989 C14orf177Q52M58 125 aa16.08■□□□□ 0.17
LDLRAD3-203ENST00000528989 BOD1L2Q8IYS8 172 aa16.08■□□□□ 0.17
LDLRAD3-203ENST00000528989 CXCL5P42830 114 aa16.08■□□□□ 0.16
LDLRAD3-203ENST00000528989 C6orf48Q9UBA6 75 aa16.08■□□□□ 0.16
LDLRAD3-203ENST00000528989 DNAH11Q96DT5 4516 aa16.05■□□□□ 0.16
LDLRAD3-203ENST00000528989 A0A0J9YXY3 114 aa16.05■□□□□ 0.16
LDLRAD3-203ENST00000528989 A0A0U1RRA0 63 aa16.05■□□□□ 0.16
LDLRAD3-203ENST00000528989 SLC25A34Q6PIV7 304 aa16.04■□□□□ 0.16
LDLRAD3-203ENST00000528989 CARD19Q96LW7 228 aa16.04■□□□□ 0.16
LDLRAD3-203ENST00000528989 HECTD4Q9Y4D8 3996 aa16.03■□□□□ 0.16
LDLRAD3-203ENST00000528989 CNBPP62633 177 aaKnown RBP16.03■□□□□ 0.16
LDLRAD3-203ENST00000528989 SCGB1D4Q6XE38 83 aa16.03■□□□□ 0.16
LDLRAD3-203ENST00000528989 PFN2P35080 140 aa16.02■□□□□ 0.16
LDLRAD3-203ENST00000528989 HERV-K104P63124 156 aa16.02■□□□□ 0.16
LDLRAD3-203ENST00000528989 LINC01620Q4KN68 170 aa16.02■□□□□ 0.16
LDLRAD3-203ENST00000528989 DLEU1O43261 78 aa16.01■□□□□ 0.15
LDLRAD3-203ENST00000528989 PKD1P98161 4303 aa16■□□□□ 0.15
LDLRAD3-203ENST00000528989 SMIM13P0DJ93 91 aa16■□□□□ 0.15
LDLRAD3-203ENST00000528989 KRTAP10-2P60368 255 aa16■□□□□ 0.15
LDLRAD3-203ENST00000528989 MEIG1Q5JSS6 88 aa16■□□□□ 0.15
LDLRAD3-203ENST00000528989 ERG28Q9UKR5 140 aa16■□□□□ 0.15
LDLRAD3-203ENST00000528989 F8WDY8 70 aa15.99■□□□□ 0.15
LDLRAD3-203ENST00000528989 ADAMTSL4-AS1Q5T5F5 129 aa15.99■□□□□ 0.15
LDLRAD3-203ENST00000528989 SFTA2Q6UW10 78 aa15.99■□□□□ 0.15
LDLRAD3-203ENST00000528989 TRBV30A0A0K0K1B3 111 aa15.99■□□□□ 0.15
LDLRAD3-203ENST00000528989 EREGO14944 169 aa15.99■□□□□ 0.15
LDLRAD3-203ENST00000528989 DAND5Q8N907 189 aa15.99■□□□□ 0.15
LDLRAD3-203ENST00000528989 UQCR10Q9UDW1 63 aa15.98■□□□□ 0.15
LDLRAD3-203ENST00000528989 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.97■□□□□ 0.15
LDLRAD3-203ENST00000528989 LITAFQ99732 161 aa15.97■□□□□ 0.15
LDLRAD3-203ENST00000528989 LINC00158P58513 81 aa15.97■□□□□ 0.15
LDLRAD3-203ENST00000528989 C2orf91Q6ZV80 131 aa15.97■□□□□ 0.15
LDLRAD3-203ENST00000528989 LINC00336Q6ZUF6 198 aa15.96■□□□□ 0.15
LDLRAD3-203ENST00000528989 MIEN1Q9BRT3 115 aa15.95■□□□□ 0.14
LDLRAD3-203ENST00000528989 C9orf163Q8N9P6 203 aa15.94■□□□□ 0.14
LDLRAD3-203ENST00000528989 RNF151Q2KHN1 245 aa15.93■□□□□ 0.14
LDLRAD3-203ENST00000528989 TSTD3H0UI37 97 aa15.93■□□□□ 0.14
LDLRAD3-203ENST00000528989 Q6ZRP5 223 aa15.93■□□□□ 0.14
LDLRAD3-203ENST00000528989 IGLV5-52A0A0A0MRZ9 124 aa15.92■□□□□ 0.14
LDLRAD3-203ENST00000528989 MIR7-3HGQ8N6C7 128 aa15.92■□□□□ 0.14
LDLRAD3-203ENST00000528989 CIRBPQ14011 172 aaKnown RBP15.91■□□□□ 0.14
LDLRAD3-203ENST00000528989 DNAH5Q8TE73 4624 aa15.91■□□□□ 0.14
LDLRAD3-203ENST00000528989 COX17Q14061 63 aa15.91■□□□□ 0.14
LDLRAD3-203ENST00000528989 NDUFC2-KCTD14E9PQ53 114 aa15.9■□□□□ 0.14
LDLRAD3-203ENST00000528989 EIF4EBP3O60516 100 aaPredicted RBP15.9■□□□□ 0.14
LDLRAD3-203ENST00000528989 NPC2P61916 151 aa15.9■□□□□ 0.14
LDLRAD3-203ENST00000528989 GAGE2EQ4V326 116 aa15.9■□□□□ 0.14
LDLRAD3-203ENST00000528989 GAGE2DQ9UEU5 116 aa15.9■□□□□ 0.14
LDLRAD3-203ENST00000528989 RPL18AQ02543 176 aaKnown RBP15.89■□□□□ 0.13
LDLRAD3-203ENST00000528989 LINC00587B1AMM8 73 aa15.88■□□□□ 0.13
LDLRAD3-203ENST00000528989 TIMM17BO60830 172 aa15.88■□□□□ 0.13
LDLRAD3-203ENST00000528989 XAGE1AQ9HD64 81 aa15.88■□□□□ 0.13
LDLRAD3-203ENST00000528989 PKHD1P08F94 4074 aa15.87■□□□□ 0.13
LDLRAD3-203ENST00000528989 SDIM1Q6ZPB5 146 aa15.87■□□□□ 0.13
LDLRAD3-203ENST00000528989 HIGD1BQ9P298 99 aa15.87■□□□□ 0.13
LDLRAD3-203ENST00000528989 A0A1B0GVY2 172 aa15.86■□□□□ 0.13
LDLRAD3-203ENST00000528989 TMEM238C9JI98 176 aa15.86■□□□□ 0.13
LDLRAD3-203ENST00000528989 TLX1NBP0CAT3 122 aa15.86■□□□□ 0.13
LDLRAD3-203ENST00000528989 GAGE2BQ13066 116 aa15.86■□□□□ 0.13
LDLRAD3-203ENST00000528989 HNRNPA3P51991 378 aaKnown RBP15.86■□□□□ 0.13
LDLRAD3-203ENST00000528989 SRSF9Q13242 221 aaKnown RBP eCLIP15.86■□□□□ 0.13
LDLRAD3-203ENST00000528989 SND1-IT1Q9HBX3 110 aa15.86■□□□□ 0.13
LDLRAD3-203ENST00000528989 LOC107984640A0A0U1RRK4 108 aa15.85■□□□□ 0.13
LDLRAD3-203ENST00000528989 PGPEP1Q9NXJ5 209 aa15.85■□□□□ 0.13
LDLRAD3-203ENST00000528989 SOSTDC1Q6X4U4 206 aa15.84■□□□□ 0.13
LDLRAD3-203ENST00000528989 A0A096LNI7 61 aa15.84■□□□□ 0.13
LDLRAD3-203ENST00000528989 HIST1H4GQ99525 98 aa15.84■□□□□ 0.13
LDLRAD3-203ENST00000528989 IGKV2-24A0A0C4DH68 120 aa15.83■□□□□ 0.12
LDLRAD3-203ENST00000528989 SPANXDQ9BXN6 97 aa15.83■□□□□ 0.12
LDLRAD3-203ENST00000528989 SPANXB1Q9NS25 103 aaPredicted RBP15.83■□□□□ 0.12
LDLRAD3-203ENST00000528989 SPANXCQ9NY87 97 aa15.83■□□□□ 0.12
LDLRAD3-203ENST00000528989 CHTF8P0CG12 524 aa15.82■□□□□ 0.12
LDLRAD3-203ENST00000528989 C9orf129Q5T035 196 aaKnown RBP15.81■□□□□ 0.12
LDLRAD3-203ENST00000528989 MUSTN1Q8IVN3 82 aa15.81■□□□□ 0.12
LDLRAD3-203ENST00000528989 LINC00308Q8TCZ7 52 aa15.81■□□□□ 0.12
LDLRAD3-203ENST00000528989 PANO1I0J062 215 aa15.8■□□□□ 0.12
LDLRAD3-203ENST00000528989 PTTG1IPP53801 180 aa15.8■□□□□ 0.12
LDLRAD3-203ENST00000528989 CTAG1AP78358 180 aa15.8■□□□□ 0.12
LDLRAD3-203ENST00000528989 PCP4L1A6NKN8 68 aa15.8■□□□□ 0.12
LDLRAD3-203ENST00000528989 DDTP30046 118 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms